KEGG   Pleurodeles waltl (Iberian ribbed newt): 138265719
Entry
138265719         CDS       T10800                                 
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
  KO
K15542  polyadenylation factor subunit 2
Organism
pwl  Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pwl00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    138265719 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pwl03019]
    138265719 (WDR33)
Messenger RNA biogenesis [BR:pwl03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     138265719 (WDR33)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_Gbeta WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd ASA1 Beta-prop_WDR90_POC16_2nd DSE1_N ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd CFAP251_N WDR90_beta-prop_4th Beta-prop_WDR75_1st eIF2A Beta-prop_Vps41 Beta-prop_SCAP WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_WDR35_TULP_N Collagen Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_WDR11_2nd Beta-prop_WDR41 Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 138265719
NCBI-ProteinID: XP_069069778
LinkDB
Position
11:complement(375282431..376307548)
AA seq 1727 aa
MAMEIGSPPRFFHMPKFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSIIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKMKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEPIREASFSPTDNKFATCSDDGTVRIWDFMRCHEERIL
RGHGADVKCVDWHPTKGLIVSGSKDSQQPIKFWDPKTGLSLATLHAHKNTVMEVKWNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEIAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDMEPNNLSSIPGMGIPEQLKIAMEQEQLGKEDTVESEMTIPGLDWGMEE
VLLKDQKKVPQKKVPFAKPIPPQFQQAWMQNKVPLLPPSEPVTRKEEVNLDEKKRTQAEI
EQEMAALQYTNPLLLEQLKIERLAQKQVEQTQPSQPPSLQPPPQAVPVLGAQTFSGQGPH
SQGFQQPPPPQQMPMNMPQMGPPRPQGQFIPPVPPGPMGPPRHMVPPNQMGQPVLRTPGP
MGPQGQMGPQGQMGTPGHIRPQGHIRPQGHLGPQGQMGSQGPPSLQGSGGPQLFMGPGSQ
GMPRPQDFHGHQGMQRHPGPRGPMDPQSNAILQGHLGPPVPSSTQGLQSGLGPRGMSGLP
SPLALQGSQGQVRGLTPRGFPGPSGPQDIQGPCPQPILPGHPVQEVRGPHAQGSMLLHGP
QDMRNPQEMQPPQDMRGSQDIRAPQDLRGSQGTRGPQDMHGPQEMRGPQNMRGSQEIRGL
QEMRGHQDLRTQDIRGLSDMRNVQDKRAPPDLRGQHDIRGPQDLRGPPDIRGNQDYRGPL
EVRSPQDVRGSSDVRAPSDLRGPPDMRGTLDLRGPQEMLGPQDLRGQQEMRGSLDMRGSQ
DLRPSSDIRAHQDVRGPLEIRGPQDLRGAQETLGPQDVRGLQEMRGPQDLRAQQVIGGHQ
NMRGLQDVRGALDTRGLQDMKGPHDIRGQHELRGPQDGQDLQEMRGPQDGYGTQEARGLP
ELRGAQDARSLSEFRGPQDARGLQDLRSSRDTRGSLDLRGSQESRGQQELRIPQDAKPLS
ELRVPQEVRNPQEMRGLQDMRSPQEIRSQQEIRVPQEIRGQKGPQQGIGPTQDARGPSGS
QGAIGGPHGGLPVLLNPQRGPQTSHDLGPFQHQKGALLGEGPRTNFSQGGQNPVVPPLMS
SLGQQGPQSRIPSFSQVHLGPSPNKGDCHGPPNHLLGPSSEHLHDQSLEVSDHSSDRAPF
RSSQEWVDSRNSRVPPERHLHSSDFQENFERPEDFLPDEHFSHRSREFEGRSGPSTQEEK
WRRGGPRSPFSPEQRDSNEGESRGTTLWEGRRHSEERYPREAEDSRYRGRQKESLRRGGQ
QRHDSHGPRGKDSFSSPEKCGSDETYDPKDEHPRGRDGGGRLRTRATPRSGRKGLLPTPD
EYPRVEGGRKPDSWDGGRELGPEHFRDRPRPDHPVPSSPNDPESPGSERVESLQGMDTTS
LPPRKRPWHDGPGTPDSRDSETPGCPPEERGKGRGSTASSQRVGKSSRSGSQDVDPLREE
GFGGPAVNTNPSRGGRSGNWRGGSNLSSGPSRRGAARGSTRGGGRGR
NT seq 5184 nt   +upstreamnt  +downstreamnt
atggcaatggaaattggctccccgcctcgattcttccacatgccaaagttccagcatcag
gctccacgtcagctcttttataaaagaccagactttgcccaacaacaggctatgcaacag
ctcacttttgatggtaagcgcatgaggaaggcggtcaaccggaagactattgactataac
ccatcaatcatcaagtatctagagaacagagtgtggcagagagatcagcgagatatgcgt
gctatccagccggatgctggctattacaacgatcttgtcccacctattggaatgttgaac
aacccaatgaatgctgtaacaaccaagtttgtcagaacatctacaaataagatgaaatgt
cctgtatttgttgtcaggtggactcctgaaggacgacgcctagtcactggagcatcaagt
ggagagttcactttgtggaatggtctgacatttaattttgaaaccattttacaggctcat
gacagtccagtgcgagccatgacctggtcgcacaacgacatgtggatgctgacagcagat
cacggtggatatgtgaaatattggcagtccaacatgaataatgtgaagatgttccaggca
cacaaggagccgattagagaggccagtttctcacctacggataataaatttgcgacgtgt
tctgatgacggcactgttaggatctgggactttatgcggtgtcacgaggagaggattctt
cgaggacacggggcggatgttaaatgtgtggactggcatccaacaaagggcctaattgtg
tctggaagcaaagacagtcaacagccaatcaagttttgggatccgaagactgggctcagc
cttgccacattacatgcacataagaacacagtgatggaagtgaaatggaatctaaatggt
aattggttactcactgcttcacgagatcacctgtgcaaactctttgacattagaaacctg
aaggaggagctccaagtttttagaggtcacaagaaagaagccacagctgttgcctggcac
cctgtacatgaaggcctttttgctagtggtggttcagatggctcattgctcttctggcat
gttggggttgagaaggaagttggtggtatggaaattgcccatgaaggtatgatctggagt
ctggcatggcaccctttaggacatatcctctgctctggatctaatgaccacaccagcaag
ttttggacccgtaatagacccggagataaaatgagagaccgttacaatctcaatttgctg
ccagggatgtcggaggatggtgtagaatatgatgacatggagcccaacaacttatcttca
attccaggaatggggattccagaacagctaaagattgccatggagcaggaacagttggga
aaagaagacactgttgagtcagaaatgactattccaggcctagactggggaatggaagag
gtgctgttaaaagaccaaaagaaagtgccacagaagaaagtgccatttgcaaagcccatc
ccaccccagttccagcaggcttggatgcagaacaaagttcccctcttacctccatctgaa
ccagtaaccagaaaagaagaggttaaccttgatgaaaagaaaagaacacaggctgagatt
gagcaagaaatggcagccctgcagtacaccaaccctctcctgctagaacaactgaaaatt
gagagactagctcagaagcaggttgagcaaactcagccatctcagccaccctcattgcag
cctccacctcaagccgttcctgtgcttggagcccagacattttcaggacaggggccacac
tctcaaggattccagcagcctcctccacctcagcaaatgccaatgaatatgcctcagatg
gggcctcccagacctcaaggacagtttataccaccagtcccccctggccctatgggaccc
ccccgtcatatggtacccccaaaccaaatgggtcagccagtgctaaggacgcctggccca
atggggcctcaggggcagatggggcctcagggccagatgggaaccccgggacacataaga
ccccagggacacataagacctcagggacacctaggcccccaagggcagatggggtctcag
ggtccaccatcacttcaaggtagtggaggtcctcagctgttcatgggcccaggttctcaa
ggaatgcctcggcctcaggatttccacggacatcaaggaatgcagagacaccctgggcca
cgtgggccaatggatccccagtcaaatgccattttacaaggtcatttaggacctccggtt
ccctctagcacccaaggtttgcagagtggtctaggtcctagaggaatgtcaggtcttcct
tcccctcttgcattacagggctctcagggtcaggtgcgtggattgactccaagaggtttt
ccagggccctcggggcctcaggatatacagggaccatgtcctcagccaattttgcctggt
caccctgtgcaggaggtaagaggacctcatgcccagggttcgatgctgctacatggccca
caagacatgagaaacccccaggaaatgcagccacctcaggacatgcggggttcccaggac
attagggcccctcaagacttgaggggatcacaagggacgagagggccacaggacatgcat
gggccccaagagatgaggggtccccagaacatgagaggatcccaggaaataagaggcctt
caagaaatgaggggacaccaagatttgagaactcaggacatacgtgggctttcagatatg
agaaatgtacaagacaagagggccccaccagatttaagaggccagcacgatattagggga
ccccaggatttgagaggcccaccagatataaggggaaatcaagattatagaggcccactg
gaagtgaggtcaccacaagatgtgagaggttcatcagacgtgagggcacccagcgatttg
aggggcccacctgatatgaggggaaccctagatttaagaggcccccaagaaatgctggga
ccccaggatttgagaggccaacaagaaatgcggggttcactagacatgcggggaagtcaa
gacttgagaccatcttctgacatccgggcgcaccaagatgtaagaggaccactggaaata
aggggaccccaagatttaagaggcgctcaggagacccttggaccacaagatgtgcgaggc
ttgcaggaaatgagagggccccaagatttgagagcacaacaggtgattggtggacaccaa
aacatgagaggattacaggatgtgaggggagccctagatactagaggcctacaggatatg
aaaggacctcacgatataagaggccagcatgagttaaggggcccacaagatggacaagat
ttacaggaaatgaggggaccccaagatggatatggcactcaagaagcaagaggtctgcca
gagttgaggggtgctcaagatgcaagaagcctctcagaattcaggggtccccaagatgct
agaggcctgcaagatttgaggagttcacgagatacaagaggttcactggatttgagagga
tcccaagaatcaagaggccagcaggagttgagaataccccaagatgcaaaacccctttca
gaattgcgggtaccccaagaagtgagaaaccctcaagaaatgcgagggctacaagacatg
aggagtccacaagaaataagaagtcaacaagaaataagagtaccccaggagataaggggg
caaaagggaccacagcaaggaataggacctactcaggatgcacggggtccatcaggttcc
caaggagcaattgggggtccacatggagggttaccagtgctgctaaatccacagagaggg
ccacagacatctcatgatcttggacctttccaacatcagaaaggagcactgcttggtgaa
ggacctagaacaaatttcagccagggaggacagaatccggtggttccacctctgatgtca
agcctggggcagcaaggtccacaaagtcgtattccttcttttagccaagtacatttagga
cccagtccaaataaaggtgactgccatggtcctccaaaccatttgttggggccctcttct
gagcatctccatgaccaaagccttgaggtttcagatcatagttctgatagggccccattc
aggtccagccaggagtgggtagactcaagaaacagccgggtgcctccagaaagacatttg
cactcctctgattttcaagagaattttgaacggccagaagactttcttccagatgaacat
tttagtcaccgctcaagggaatttgaaggtcgaagcggcccatcaacacaagaagagaaa
tggaggcgtggtggaccaagatccccctttagtccggaacagagggactcaaatgagggt
gagagccgaggtacaaccctatgggaaggtcgaagacactctgaagagaggtatcccaga
gaggcagaggactctaggtacagagggaggcaaaaagaaagcctacggagaggaggacag
cagaggcatgacagccatggccccagaggaaaagacagcttttccagtcctgaaaaatgt
ggctccgatgagacttatgatccaaaagatgagcatcccagaggaagagacggtggtggg
cggttgagaacccgtgccactccaagaagtggcaggaaggggctccttccaaccccagat
gaatatcctcgagttgaaggtgggcgtaaaccagattcttgggatggagggagagagcta
ggtcctgagcatttccgagaccgcccacgtcctgatcatcctgtgccatcttctcctaat
gaccctgaatctccaggtagcgagcgcgttgagtctttgcaaggaatggacactacatcc
ttgccaccccgaaagcgaccttggcatgatggacctgggacccctgacagcagagattca
gaaacccctgggtgtccacctgaggagagagggaaaggtcgaggatctacagcttcttcg
caaagagtggggaagtccagtcggtctgggtctcaagatgtggatcctcttcgtgaagaa
ggatttgggggccctgcagtcaacaccaacccatcacgaggaggaagaagtggaaactgg
agaggaggcagtaacttgagctcaggcccctctcggcgaggggctgctaggggatctaca
cgtggaggtggcaggggccgatag

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