Pleurodeles waltl (Iberian ribbed newt): 138265757
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Entry
138265757 CDS
T10800
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04136
Autophagy - other
pwl04140
Autophagy - animal
pwl04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138265757 (ATG16L1)
04136 Autophagy - other
138265757 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
138265757 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138265757 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
pwl03029
]
138265757 (ATG16L1)
Membrane trafficking [BR:
pwl04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
138265757 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
138265757 (ATG16L1)
Mitochondrial biogenesis [BR:
pwl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
138265757 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF4
eIF2A
WD40_RFWD3
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Ge1_WD40
Peptidase_M15_4
HAUS-augmin3
Motif
Other DBs
NCBI-GeneID:
138265757
NCBI-ProteinID:
XP_069069867
LinkDB
All DBs
Position
11:complement(419671803..419754601)
Genome browser
AA seq
607 aa
AA seq
DB search
MASGCRAQCFPEWKQHISLELRRRDRTQRQGFEELIQQYNKLLEKSDLQDVLAAKLQTEK
YESQSRHDISPGHDGYRSEALLQDLSEMRIKHQEELTDLHKKRGELAQTVIDLNNQLQQK
DREIQANDARIAEYLQTIEVLRMECQDLRIKLQDLEKVNQILKDEYDALQITFNALEEKL
RKTTEDNQELVARWMAEKAQEANRLNAENEKDVKKQQTRLQNELAEAAKEPLPLEPDDDE
IEVLEQNPDPTGDTSPIRGVVRTPSKRQSQPSGGLLDSFTNIFGRRSSASYPMQTECTDS
PTGTLREVRLPNTAVFVFDAHEGEVNAVRFSPSSRLLATGGMDRRVKLWEVVRDKCEMKG
ALTGSNAGITSIEFDTSGHHLLAASNDFASRIWTVEDLRLRHTLTGHSGKVLSAKFLLDN
THIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSES
TVRELDLQGRITALDLNPDKSELLSCSRDDQLKIYDLRANAIRHTFSAQGFKCGSDWTRA
IFSPDGSYVVAGSADGTLYLWNVLTEKVERMLSKHHSASINAVAWSPSGAHVLSVDKGSR
GVLWSDF
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggctgccgggcgcagtgtttcccagaatggaagcagcatatttcgctggag
ttgagacgaagggaccggacccagaggcagggattcgaggaactcatccagcagtataat
aagctgttggagaagtcagaccttcaggatgtgttggctgcgaagctgcaaaccgagaag
tacgaatctcaaagcagacatgacatcagcccagggcatgacggttacagaagtgaggca
ttgctgcaggacctatcagagatgaggataaagcaccaagaagagctcacagaccttcac
aagaaacgaggagagttagcacagactgtgattgacttgaacaaccagcttcagcaaaag
gaccgtgagattcaggccaatgatgcaagaattgcagagtatctacaaaccattgaggtc
ctgagaatggagtgtcaagatctgcgtatcaaactgcaggatttagagaaggtgaatcag
attcttaaagatgaatatgacgctttgcagataacttttaacgcactagaggaaaagcta
cggaagaccacagaggacaaccaggaacttgttgcccgctggatggctgagaaagcccag
gaggccaaccgcctaaacgcagaaaatgagaaggatgtcaagaagcagcaaacacgattg
cagaatgagcttgcggaagctgcgaaagagcccttgccccttgaaccggatgatgatgag
atagaagtgctggaacagaaccctgatcccacaggcgatacatcccccatcagaggagtc
gtccgtacacccagtaagcgacagtcgcagccaagcggtggtcttctggattccttcact
aatatttttgggcgacgttcctccgcttcctaccctatgcagacagagtgtacagacagc
ccaactgggacacttcgagaggtgcgccttccaaacactgccgtctttgtctttgatgct
catgaaggcgaggtgaatgctgttcgcttcagccccagctcccggctacttgccactgga
gggatggacaggagggtaaaactctgggaagtggtcagagacaaatgtgaaatgaaaggt
gcccttactggcagcaacgctggcatcacaagcatagagttcgacacttctggccatcat
ctccttgcagcatccaatgattttgcaagcagaatttggactgtggaggatcttcgactc
aggcacaccttgactggccacagtggaaaagttttgtctgccaagttcctcttggataac
actcatattgtgtctgggagtcatgatcgaacactcaagctgtgggacctacggagcaaa
gtgtgtataaaaactgtatttgctggctcaagctgcaatgacattgtctgcacagagcag
tgtgtaatgagtggccactttgataagaaaatccgtttctgggatatccggtcagaaagc
acagtgcgggagctggacctccaggggcgaatcactgctttggacctgaatcctgataaa
tctgagctcctgagctgctcacgagatgaccagctaaagatctatgatctacgagccaat
gcaatcaggcatacttttagtgcccagggattcaagtgcggttctgactggacaagagcc
atatttagccctgatggcagctacgtagtagcgggttcagcagatggcaccctctatctc
tggaatgtgctgacagaaaaggttgaaagaatgctgtccaagcaccatagtgcctccatc
aatgctgtggcatggtccccatctggtgctcacgtgctcagtgtggacaaaggaagtagg
ggtgtactgtggtctgacttctga
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integrated database retrieval system
