Pleurodeles waltl (Iberian ribbed newt): 138265766
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Entry
138265766 CDS
T10800
Symbol
GIGYF2
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138265766 (GIGYF2)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
138265766 (GIGYF2)
Surveillance factors
Other surveillance factors
138265766 (GIGYF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
138265766
NCBI-ProteinID:
XP_069069883
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All DBs
Position
11:complement(423003766..424380094)
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AA seq
1346 aa
AA seq
DB search
MAGETQTLNFGPEWLRALSSGGTVTSPPLSPALPKYKLADYRYGREEMLALYLKDNKIPS
DLMDKEFQPILQEEPLLPLALVPFTEEEQRNFSMSVNSTVVLRLMGRGGGTVVGAPRGRS
TSRGRGRGRGEGSFYQRSFDEVESGFGRGTREMHRSQSWEERGDRRFEKPSRKEPDHLPN
AYNTSMVPGTVKAGSEQKTGRPTFEECGTVSAGKKHELTRSESDNWRHLKEEVNGREDED
GGIWRPAGTRKEGERWVRPPSPEIIRGPGWREQVERRRRFEFDFRERDDERGHRKVRPGS
GSLDEDKDSLPEWCFEDAEEETGTFDSSGAFLPSKKVQKEPIPEEQELDFRPSEDGEERS
DSEGSHNEEAKEPDKNVQKEMETIDRLPINKEGTARLNEEPVAPAKEVPPSSPTCWLGTP
VEPRMQEQASCILSNKKEEKPTEQIEKWDEKKNSPQISPTGPKKVEEVVLTAVQTVTHSP
PDAAAAKTPLSTCAPSRTAAPQASSMPMTGAPGMGNVSNETDDDDGLKHLEQQAEKMVAY
LQDSALDDERLAAKIKEYRTKGSSLPQPQEAQQKWFYKDPQGAIQGPFSNQEMAEWCQAG
YFTMSLLVRRACDDSFQPLGDLMKLWGRVPFTSGPVPPQLLGEMDLERRSRQQEISTLYH
LHHLQYQQFILQQRYAQLLAEQQKTALSSQQQQQLAVLMQQFQTLKMRISEQNLVHPVTR
TMSVPDANSVWELQTPALQPTAWEGNSVWDLPADAMPPGPSPEQLQLEKAKAAKLEQERR
DKELRAKQQQEKEEMEQKQQEELRKQQEELRQQKEELRRQQEELLKRQQEEEERKRREEE
ELARRKQEEALRRQRELEIALRRQQEEERLQREQSLKHMEEKRRKDEEEQRRQEELLQKK
EEAARWAREEEEAAQRLAEENRLKKEEEAAKLQQEEEERKKKELEQQRQKELQRQRQQEA
LRRLQQLQMAQMKLPSSSTWGQQASTAGISASQASLSLAEIQKLEEERERQLQEEQARQQ
RELMKSLYQHQQQQQQQQKLSGWGNIPKGTGNTKSLLEIQKEEAKQMQKHKQENHTRGNS
CVSAAADTTSTIITPSSVQTNVGSSVWGTINTSPTSQWTSDSSSGIWSNVDSKNSNLGFW
DDAAKDVGPRNTANRNKSKNNSSLSKNVGGTSRQNKKVEEEEKLLKLFQGMNKVQDGFTQ
WCEQMLHALNTANNLDVPTFVCFLKEVESAYEVHDYIRAYLGDTPEAKEFGKQFIERRAK
QKVNQQRQQPQQKQDSVWGLSHPAVQSVFHSNQSNNQQSSYDTVQSAGKKKKKQRMVRAD
PSLLGFSVNASSERLNMGEIETLEEC
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggctggagaaactcagacgcttaactttgggccagaatggctgcgtgcactctctagc
ggtgggaccgtgacttctccaccactctcaccggcattgccaaagtacaaactagcagat
tatcgttatgggagagaagaaatgttagcactttatctgaaggataataagattccttca
gacctcatggataaggagtttcaacctattctacaggaggaacccctgctaccacttgca
ctggtgccttttacagaggaagaacaaagaaatttctcgatgtctgtgaacagtaccgtg
gtcttgaggctaatgggacgaggtggaggaacagtggtaggggctcccagaggccgcagc
acttctagaggtcgaggacgaggtcggggagagggcagtttttaccaaagaagttttgat
gaagtggaatccggttttggtcgaggaactcgtgaaatgcacagatcacagagttgggag
gaaaggggagacagaagatttgaaaaacccagtcgaaaagaaccagaccatctgccaaat
gcgtataacacttcaatggtgccagggactgtcaaagctgggtcagaacagaaaaccgga
agacccacatttgaggaatgtggcacagtgagtgcaggcaaaaagcatgaattaactcga
tcagagagtgataattggcgtcacttgaaagaggaagttaatggtcgtgaggacgaagat
ggtggtatctggcggccagctgggactcgaaaagaaggagagcggtgggtgcgacctccc
agtccagaaattattcgaggccctggttggcgggaacaggtggaacggcggcgaaggttt
gaatttgactttcgagaaagggatgatgaacgaggacacagaaaggtccgaccaggcagc
ggcagcttggatgaagataaggacagcctcccagaatggtgttttgaagatgcagaagaa
gaaacagggacgtttgattcttcaggggccttcctcccatctaagaaagtacaaaaggag
ccaattcctgaggagcaagaactggatttccggccctcggaggatggtgaagagcgctct
gattctgaggggagccataacgaagaagccaaagaaccagacaagaacgttcaaaaggag
atggagaccattgatagactgcctataaataaagaagggacagcaaggctaaatgaagaa
cctgttgcacctgccaaagaagtcccaccgtcctcgccaacctgctggctgggtacccct
gttgaacctcgaatgcaggagcaggcctcatgcatcttatcaaataaaaaggaggagaaa
cccacagaacaaattgagaaatgggatgagaaaaaaaactctccccagatatcaccgaca
gggcccaagaaagtggaagaggtggttcttactgctgtccagactgttacacacagcccc
ccggatgcagctgctgctaaaacacctctttcaacttgtgcacccagtcgaactgctgct
cctcaggcgtccagcatgcccatgaccggcgctcctgggatggggaatgtttccaatgaa
acagatgacgacgatgggctaaaacatttagagcagcaggctgagaagatggtggcatat
ctgcaggacagtgcgctagatgatgagaggctggcagcaaaaatcaaagaataccgaaca
aaaggttcctccctccctcagcctcaagaagcccagcaaaaatggttttataaggacccc
caaggtgctatccaaggtcccttcagtaatcaagagatggcagaatggtgccaagcaggg
tacttcaccatgtccttgttggtaagaagggcatgtgatgatagcttccagcccctcgga
gatctgatgaagttgtggggaagagtgccttttacgtctgggcctgtgcctcctcagttg
ctgggagaaatggatctagagcggcggagccgacagcaggaaatctccacactctaccat
ctgcaccacctccaataccagcagttcatattacagcagcgttacgcccagctgttggca
gagcagcagaagacagccctttcttcacagcagcagcaacagttagctgttcttatgcaa
cagttccagactctaaagatgagaatctcagagcagaacttggtccatccagtgacaaga
accatgtctgtaccagatgccaactcagtatgggagctccaaactcctgccctacaacct
acagcatgggaaggcaacagtgtttgggatctccctgcagatgctatgcctccaggtccg
tctccggaacagcttcagctggaaaaggccaaggcagcaaagctagagcaggagaggaga
gataaggaattgagagccaagcagcaacaggagaaggaggaaatggagcagaaacaacaa
gaggagctgcgcaaacagcaagaagaattgcgccagcaaaaggaggagctacgccgtcag
caggaggaactccttaagcgtcagcaagaagaggaagaaaggaaacgccgagaagaagag
gagttagcccgaaggaaacaggaagaagctctgaggcgtcagagagaactagaaattgca
ctaagacgccaacaggaagaagaacggctacaaagggagcagtcacttaaacatatggag
gagaagagaaggaaagatgaggaagagcagaggcgacaggaagagctgcttcagaaaaag
gaagaggctgctaggtgggctcgggaagaagaggaggcagctcagcgactggcagaggag
aataggttaaaaaaggaggaagaggcagcaaaacttcagcaggaagaggaggagcggaaa
aaaaaggagttagaacaacagcgtcagaaggaattgcagcggcaaaggcagcaagaagca
ctgcgcaggctgcagcaactgcaaatggcgcaaatgaagcttccgtcatcatcaacgtgg
ggtcagcaagccagcacagcaggcatatcagcatcacaggcttccttgtcattggcagag
atccagaaattggaggaggagcgagaaagacaactgcaagaggagcaggcacggcagcag
agggagcttatgaagagcctctatcagcatcaacaacagcagcaacagcagcagaaactt
tcaggctggggaaatatccctaaagggacaggaaacacaaagtccttgcttgaaattcag
aaagaggaggccaaacagatgcagaaacacaagcaggaaaaccacacccgtggtaacagc
tgtgtcagcgctgctgctgatactaccagcacaatcatcacaccttccagcgttcaaacc
aatgttgggagttccgtctgggggactataaatacaagtcccaccagccaatggacctct
gactcctccagtggcatatggagcaacgtggacagcaaaaactccaatttgggcttctgg
gacgatgctgcaaaggatgttgggccacgtaacactgccaacagaaacaagagtaagaat
aactccagcttaagtaagaatgtaggtggtaccagccgccaaaataaaaaagtggaggaa
gaggagaagcttctgaaattgttccagggaatgaataaggtccaggatggtttcactcag
tggtgtgaacaaatgctccatgcactcaatacagccaacaacttggatgtcccaacattt
gtctgtttcctgaaggaagtggagtctgcctatgaggtccatgactatatccgtgcttac
ctcggtgacactccagaagcgaaggaatttggcaagcagtttattgagcgtcgtgccaaa
cagaaagtgaatcaacagcggcaacaaccacagcagaagcaggactcagtctgggggctc
agtcatcctgcagtgcagtcggtctttcactctaaccagagtaacaaccagcagtcaagt
tatgacactgtgcagagtgctggcaagaagaaaaaaaagcaacgaatggtgcgagctgac
ccaagccttcttgggttttctgttaatgcctcatctgagcggctcaatatgggggagatt
gagacactggaagaatgttga
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