Pleurodeles waltl (Iberian ribbed newt): 138265833
Help
Entry
138265833 CDS
T10800
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pwl04040
]
138265833 (TRPC1)
Ion channels [BR:
pwl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
138265833 (TRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ank_2
Ion_trans
Ank_4
Ank_5
Ank_3
LHD_TRPY1
Dsc3_C
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
138265833
NCBI-ProteinID:
XP_069070014
LinkDB
All DBs
Position
11:complement(527259554..527490432)
Genome browser
AA seq
778 aa
AA seq
DB search
MAALYQSTDSSSPNKFLDLKDVREVKEETTLDERLFLLACEKGDYYMVKKLLEENCSGEM
NINSVDVLGRNAITIAIENENLDILQVLLDYGCQCTDALLVAIDSEVVGAVDILLNHRPK
RSTRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPKPHAVGCEC
TLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEVEFR
NDYEELAQQCKTFAKDLLAQARNSRELEVILNHQSSDEPLDKRGLLEERMNLSRLKLAIK
YNQKEFVSQSNCQQFLNTVWFGQMAAYRRKHTCKKILIVLTVGLFWPVLSLCYLVAPKSR
LGRIIHTPFMKFIIHGASYFTFLLLLNLYSVVYNEDKKNTMGPALERIDFLLIMWLIGMV
WCDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHSKFHSIAERKDWDAFHPT
LVAEGLFAFGNVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFTIGL
TQLYDKGFESHHEKDCEGIFCKQQSNDTFHSFIGTCFALFWYIFSLAHVALFVTRFSYSE
ELQSFVGALIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDK
CTMPPPFNIIPSPKTICYLFNSISKWICSHTSTGKVKRQNSLKEWKSLRQKRDENYQKVM
CCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAMFYPRN
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctataccagagcacggactcctcctcacccaacaaatttctggacctaaaa
gatgtgcgggaggtgaaggaagagaccaccctggacgagaggctgttcctgctggcctgc
gagaaaggtgactattacatggttaaaaaactcttggaagagaactgctcaggggaaatg
aacataaactcagtcgatgtgcttgggagaaatgccatcaccatagctattgagaatgag
aacttggatatactgcaggtcctcttggactatggttgccagtgcacagatgcgctgctt
gtggcgattgactcagaagttgtgggagctgttgacatactactgaatcacagaccgaag
cgatcaacaagaccaaccattgtaaaactaatggagaggatccagaacccagagtattca
acaaccatggatgtggcaccagtaattctcgcagctcatcgcaacaactatgagatattg
accatgctactgaaacaagatatctcactcccgaagccccatgctgtaggatgtgaatgt
actctgtgcactgctaaaaacaaaaaggacagtctgcggcattccaggtttcgtcttgac
atctaccgctgtttggccagccctgcccttatcatgctgaccgaggaggatccaattctg
agagcatttgagctgagcgctgacctgaaagaactcagccttgtggaagttgaattcagg
aatgattatgaagagcttgcacagcagtgcaaaacgtttgcaaaagatttgcttgcccag
gctcgcaactcccgcgagcttgaagtcatcttaaatcaccaatctagtgatgaaccattg
gataagcggggcctgctggaggaacgaatgaacctgagcagactgaagcttgccatcaag
tacaaccaaaaagagtttgtttcccagtccaactgccaacagtttctcaacactgtttgg
tttggccagatggcagcctacagacgcaagcacacctgtaagaagattttgattgttctg
acggttggcctcttctggccagtgctgtccctctgctacttggtggctcccaaatcccgg
cttggacgaatcattcacacgccgttcatgaagttcataattcatggggcctcgtacttc
acgttcctactgttactaaatctgtactccgtggtttataacgaagacaagaagaacacc
atggggcctgccctggagcggatagacttcctcctcatcatgtggctgattgggatggtc
tggtgtgacgtcaagagactctggtatgacggtctggaagactttttagaagaatcccgt
aatcagctaagttttgttatgaactctctgtatcttgcaaccttcgcactcaaagtggtg
gctcatagcaagttccactctattgcggaaaggaaggactgggatgcattccacccgacg
ctggtggcggaagggctatttgcttttggtaacgttttaagttaccttcgactcttcttc
atgtacacgactagctcgatcttgggtccgctccagatttcaatgggacaaatgttgcag
gactttggaaaattcctggggatgttccttcttgtcctattttcattcacaattggattg
acgcaactctatgacaaaggttttgagagtcatcacgagaaagattgcgaggggatattt
tgcaagcaacaaagcaatgacacatttcactcgtttattggtacatgcttcgctctcttc
tggtacatattttccctggcacacgtggcactctttgtcaccaggttcagctacagcgag
gaactgcagtcattcgtgggagcccttattgtcggcacatacaatgtggtggttgtgata
gtcctcaccaaactcttagttgcaatgctccataaaagttttcagctgatagccaaccat
gaagacaaagagtggaagtttgcccgtgcgaagctctggctcagctactttgatgacaaa
tgcaccatgccaccaccattcaacatcattccttctcctaagacgatatgttacctcttt
aacagcatcagtaaatggatctgctctcataccagcactggcaaggttaaacgtcagaac
agcctgaaggaatggaagagtctgaggcaaaaacgtgacgagaattaccagaaggtgatg
tgctgtctggttcaccgttacctgacttccatgagacagaaaatgcaaagcacagaccag
gcaacagtggaaaacctgaacgagctgcgccaggacttatccaagttcagaaacgaaatg
agagacctgcttggtttccggacgtcaaaatatgccatgttttatccaagaaactag
DBGET
integrated database retrieval system
