Pleurodeles waltl (Iberian ribbed newt): 138265939
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Entry
138265939 CDS
T10800
Symbol
NEFM
Name
(RefSeq) neurofilament medium polypeptide
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pwl04812
]
138265939 (NEFM)
Cytoskeleton proteins [BR:
pwl04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
138265939 (NEFM)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Motif
Other DBs
NCBI-GeneID:
138265939
NCBI-ProteinID:
XP_069070239
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Position
11:630743748..630756243
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AA seq
958 aa
AA seq
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MSYTLESLGNPSYRRIAETRTGYSRTSASPSSGFRSQSWSRGSPSTISASYKRSNLAAPR
AYSSTVLSSSDSLDFSQSSLHNGDSKFLSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKE
VEAEIQALRQKQTSHSQLGDVYDQEIRELRALLEQVNHEKAQIQLDTDHIEEDIQRLKDR
YEDEARLRDDTEATIRAMKKDIEEASMIKVELDKKLQSLQDEVVFFRNNHEEEVNELLAQ
IQASQITVERKDYQKTDITSALKEIRSQLECHTDKNMQQAEDWFKCRYTKLTEAAEQNKE
AIKSAKDEISEYRRQLQSKSIELESVRGTKESLERQLNDIEERHNMDLGSYQETIQQLDN
ELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSAFSGSIVAPSFPPRQ
TPVKITPSKVQKSKAEPPKLKVHHKFVEEIIEETKVDNERCEMDAALAALAEEYAANAAE
KEAAPEEQEEQEEAIEEEVVSAVRATVASAAPEVEEEREEEGEEKAEEEEAEEAGEGEAE
GSEKEEAEEISEKEEGEEAEEEEGGEEATEEGEAEADEEKEETETAEEKESEVKSEEEGE
AEADVEETIVEETIVSVKALSQASAPDVEAEEGNENEEEKAEGDEEEAGGEEEEAEEAEE
QQEASEEQEEATEEQETATEEQEEEAEEQEESTEDKAESTEDQEEATEEKEEATEEQEEV
VKEQEETTEEQEETAEEQEEAAEEQEEATEEQEESTEGQGEDAEEQEEVASEEEQDTSDK
DKAASPDKDEDSIEEAITVSKAVKVGSSNEEAKKSEDEEEADEEEEGDKTSKETEKEDTA
VNGDVQDKESEEEEENVKEKEVSEEDKGVVTNGLDESPSEDKDSNEKSKETVVITKKVEK
ITDEDGDGTTKYITESVTVTQKVEEHDETIQERLVSTKKIEKVTSSSRVVVKEVNEGD
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgagctatacactggaatcactgggcaacccctcctataggaggattgcggagactcgg
accggctacagcaggacaagtgcctcgccgtccagtggcttcaggtcgcagtcctggtcc
cggggcagccccagcaccatctccgcctcctacaagaggagcaacttggccgcgccaagg
gcgtacagctccactgtcctcagctcgtcagacagcctggactttagccagtcttcgctg
cacaatggtgactccaagttcttgtctcggtccaatgagaaggagcagcttcaggggctg
aatgaccgctttgccggctacattgagaaggtccactacttggagcagcagaacaaggaa
gttgaggctgaaatccaggccctgcggcagaagcagacgagccactctcagctgggcgat
gtctatgatcaggagatacgggagctgcgtgccctgctggagcaagtcaaccatgagaag
gctcagattcagctggacacagatcacattgaggaggacatccagcggttgaaggaccgc
tatgaggatgaagcacggctgagggacgacacagaagccaccatccgagccatgaaaaag
gacattgaagaggcctccatgatcaaagtggagctagacaagaagttgcaatccctccag
gatgaggtggtcttcttccgaaacaatcacgaggaggaagtgaatgagcttctcgcccag
atacaggcatcccagatcacagttgagaggaaagactaccagaagacggatatcacctcc
gccctgaaggagatacgctcccagctggagtgccacaccgacaaaaacatgcagcaggca
gaggactggttcaagtgccgctataccaaactcacagaggcagctgagcagaacaaggag
gccatcaagtctgccaaggatgaaatctctgagtatcggcgtcagctgcagtccaagagt
atagagctggagtcagtgaggggcacaaaggagtccctagaaaggcagctgaatgatatt
gaggagcgccacaacatggacctcggttcctaccaggaaactatccagcagctggacaat
gagttgcggggcacgaagtgggagatggcgcgtcacctgcgagaataccaggacctcctg
aatgtcaagatggccctcgacatcgagattgctgcatacaggaaattgctggaaggtgag
gagaccagattcagtgccttttctggaagcattgtagccccttcttttccgcccaggcaa
actcccgtgaagattacacccagcaaagtacagaaatccaaggctgagcctccaaagtta
aaagttcatcacaagtttgtggaggaaatcattgaagagacaaaggtggataatgagaga
tgtgaaatggatgctgcccttgctgcattggcagaggaatatgctgccaatgctgcagaa
aaagaggcggccccagaagagcaggaggaacaagaggaggccattgaggaggaagttgtt
tctgctgtaagagcaacagttgcatctgcagctcctgaggtagaagaggagcgagaagag
gagggagaggaaaaggcggaagaggaggaggcagaagaggcaggagaaggagaagctgaa
ggatctgaaaaagaggaagcagaggaaatttcagaaaaggaggagggtgaggaggctgaa
gaggaggaaggtggagaagaggcaacagaagaaggtgaggccgaagctgatgaagagaaa
gaagaaacagagacagcagaagaaaaggagtcagaggtcaaaagtgaagaagaaggagaa
gctgaggctgatgttgaggaaactattgtggaggagacaattgtgagtgtaaaggcattg
tcacaggcatcagcaccagatgtagaggcagaagaaggtaatgaaaatgaagaagagaaa
gcggaaggtgatgaggaagaagctggaggagaagaggaagaagcagaggaagccgaggag
cagcaagaagcctcagaagaacaggaggaagctacagaagagcaggaaacagccacagag
gagcaagaagaagaagcagaagaacaagaagaatcaacagaggacaaggcagaatctaca
gaagatcaagaagaggccactgaagaaaaagaagaagctacggaagagcaagaagaagtt
gtaaaggaacaggaagaaacaacagaggagcaggaagaaacagcagaagagcaggaagaa
gcagctgaagagcaggaagaagccactgaggaacaggaagaatccacagaaggccagggg
gaagatgctgaagaacaggaagaggttgctagtgaagaagagcaggatacatctgataaa
gacaaagctgcctctccagacaaagacgaagatagtatagaagaggccatcactgtttct
aaagcagttaaggttggttcctcaaatgaagaagccaaaaagtcagaagatgaagaggag
gcagatgaggaagaagagggtgacaaaacttcaaaagagacagaaaaggaagacacagca
gtgaatggtgatgtccaagacaaagagagtgaggaggaagaggaaaatgtgaaagaaaag
gaagtgagtgaggaagacaaaggagttgtcaccaatggcttagatgaaagcccctcagaa
gacaaggatagcaatgaaaagagcaaggagacagttgtgatcactaaaaaggtggagaaa
ataacagatgaagatggtgatggaaccaccaaatacatcactgaatccgtgacagtcacg
cagaaagtggaggagcacgatgaaacaattcaggaacgactagtgtccaccaaaaagatt
gagaaagtgacctccagctcacgggtagtagtgaaagaggtcaatgaaggtgattga
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