Pleurodeles waltl (Iberian ribbed newt): 138265956
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Entry
138265956 CDS
T10800
Symbol
PCNA
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03030
DNA replication
pwl03410
Base excision repair
pwl03420
Nucleotide excision repair
pwl03430
Mismatch repair
pwl04110
Cell cycle
pwl04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138265956 (PCNA)
03410 Base excision repair
138265956 (PCNA)
03420 Nucleotide excision repair
138265956 (PCNA)
03430 Mismatch repair
138265956 (PCNA)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
138265956 (PCNA)
09144 Cellular community - eukaryotes
04530 Tight junction
138265956 (PCNA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pwl03032
]
138265956 (PCNA)
03400 DNA repair and recombination proteins [BR:
pwl03400
]
138265956 (PCNA)
DNA replication proteins [BR:
pwl03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
138265956 (PCNA)
DNA repair and recombination proteins [BR:
pwl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
138265956 (PCNA)
MMR (mismatch excision repair)
Other MMR factors
138265956 (PCNA)
TLS (translesion DNA synthesis) factors
Other TLS factors
138265956 (PCNA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
AMA-1
Motif
Other DBs
NCBI-GeneID:
138265956
NCBI-ProteinID:
XP_069070277
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All DBs
Position
11:complement(677212578..677220358)
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AA seq
261 aa
AA seq
DB search
MFEARLVQGSILKKVLEALKDLIDEACWDISSSGISLQSMDSSHVSLVQLTMRSEGFDTY
RCDRNQSVGVKMSSMSKILKCAAGDDVITLRAEDNADTMTLVFEAPNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCIIKMPSGEFARICRDLSQVGDAVVISCAKDGVKFSASGSLGTGNI
KLSQTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLCNQVILSMSADIPLVVEYK
IADMGHVKYYLAPKIEDEEAA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaggctcgtttggtccagggctcgatcctgaagaaggtgcttgaagcgctgaag
gacctgatcgatgaggcgtgctgggacatcagctctagcggcatcagtctgcagagcatg
gactcgtcgcatgtgtccctggtgcagctgaccatgcgctctgagggcttcgacacgtac
cgctgcgaccgaaaccagtctgtgggggttaagatgagcagtatgtcgaaaatcttgaag
tgtgcagctggtgacgacgtcataacccttagggcagaggacaatgcagacaccatgaca
ctggttttcgaggccccaaatcaagagaaggtctccgattacgagatgaagttaatggac
ctggatgtcgaacagctcggtattcctgaacaagagtatagctgtatcatcaagatgccc
tctggggagtttgctcgcatctgcagagatctcagccaggttggtgacgcagttgtaatc
tcctgcgctaaagatggagtgaagttttctgccagcggatctctggggactgggaacatt
aagctgtcgcagacctccaatgtagacaaggaggaggaagcagttactattgaaatgaat
gaaccagttcaactgacgtttgctttgcggtatctgaacttcttcactaaagccacacca
ctatgtaatcaggtgattctcagcatgtctgcagatatccctcttgttgtggagtacaaa
atcgcagatatggggcacgtaaaatactacttggcccccaagatagaagacgaagaggca
gcgtaa
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