Pleurodeles waltl (Iberian ribbed newt): 138266163
Help
Entry
138266163 CDS
T10800
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
KO
K12825
splicing factor 3A subunit 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03040
Spliceosome
Brite
Spliceosome [BR:
pwl03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
138266163 (SF3A1)
Complex B
138266163 (SF3A1)
Complex C
U2 SnRNP specific factors
138266163 (SF3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP21_like_P
Surp
ubiquitin
Ubiquitin_2
Rad60-SLD
NOA36
CDK5RAP3
Motif
Other DBs
NCBI-GeneID:
138266163
NCBI-ProteinID:
XP_069070723
LinkDB
All DBs
Position
11:complement(818316007..818413900)
Genome browser
AA seq
812 aa
AA seq
DB search
MPAGPITALPGAESKPPDEEPKEEVPAPKPIVGIIYPPPEVRNIVDKTASFVARNGPEFE
ARIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKGQEPSAAIPKVMQAQQSAQQLPQ
KVQAQVIQETIVPKEPPPEFEFVADPPSISAFDLDVVKLTAQFVGRNGRQFLTQLMQKEQ
RNFQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLAKLKKEAESPKDVLDQVRYRVEWA
KFQERERKKEEEEKEKERVSYAQIDWHDFVVVETVDYQPNEQGNFPPPTTPEELGARILI
QERYEKFGESEDVEMEVESDDEDEPKEEKKSTAASAAASESTSQLDQDTQVQDMDEGSDE
EEDGQKAPLPPETPMPPPLPPTPDQVIIRKDYDPKASKPQPAAPATDEYLVSPITGEKIP
ASKMQEHMRIGLLDPRWLEQRDRSIREKQGDDEVYAPGLDIESSLKQLAERRTDIFGVEE
TAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDS
KDKIGPSKPSENSQTSQQPSHSTAPTPPTSSQSMTSIPRPPPVRHPPLPAPVPSPVQPRP
PAMPPPIRTTVMSAVPVMPRPPMTSVVRLPPGSVLAQMPPILHAPRINVMQMQHNAQAMM
GPRPPPMMVPTTFVPAPPAPVPNQQMQQVHPPPPMDDEPSSKKLKTEDNLMPEDEFLRRN
KGPVTVKVQVPNMQDKTEWKLSGQGLMFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEG
IFIKDSNSLAFYNMVNGSVIHLALKERGGRKK
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccggacctatcaccgccctgcccggggcagagagcaaaccgcctgacgaggag
ccaaaggaagaagtgccagcccctaaacccattgttggaattatttatccaccgcctgaa
gtaaggaacattgttgacaaaacagccagctttgtagccagaaacggcccagaatttgaa
gctcgaatccgtcagaatgaaataaataatcccaaattcaacttcttgaacccaaatgac
ccgtatcatgcctactaccggcacaaagttaatgagtttaaggagggcaaggggcaggag
ccatctgctgccatcccaaaggttatgcaggcacagcagtctgcccagcagctaccccag
aaggtgcaggctcaagttattcaggagaccattgttcccaaagagccacctccagaattt
gagtttgtagcagatcctccctcaatctctgcctttgacctggatgtggtaaagctaact
gcacaatttgtaggtcgcaatggacgtcagttcctcactcagctgatgcagaaagaacaa
cgaaatttccaatttgacttcctccgtccacagcacagtcttttcaattactttaccaag
cttgtggagcagtataccaagatcctgatccccccgaaaggtttattggctaaattgaaa
aaggaagcagagagcccaaaagatgttttagatcaggtacgatatcgtgttgagtgggcc
aagtttcaggagagggaacggaaaaaagaggaggaggaaaaggaaaaggaacgtgtctcc
tatgcacagattgattggcatgactttgttgtagtagaaactgtggattatcaacctaat
gaacaaggaaactttcctcctccaactaccccagaagagctgggggctcggatactaatt
caggagcgctatgagaagtttggagagagcgaggatgtagaaatggaggtggagtcagat
gatgaagacgagccgaaggaggagaagaagtcaacagccgcatcagcagcagcttctgag
tcaacatctcagcttgaccaggatacacaagtacaagacatggatgagggatcagatgag
gaggaggacggccagaaagctccactacctcccgaaactcccatgccaccacctctccca
cctactccagaccaggttataattcggaaggactatgatcccaaagcctctaaaccgcaa
ccagcagcacccgccacagatgagtaccttgtgtcgcccataaccggcgagaaaattcca
gccagtaagatgcaagagcacatgcgtattggactgctggatccacgatggcttgagcag
cgtgaccgttccattcgagagaagcaaggcgatgatgaggtgtatgcaccaggcttggac
atcgagagcagtttgaaacagctggctgagcgccgtactgatattttcggtgtagaagaa
actgctattggtaagaagattggtgaggaagagatccagaagcccgaggagaaggtaact
tgggatggtcattccgggagcatggcccgaacacagcaggctgcccaggccaatattaca
ctgcaggagcaaattgaagccatccacaaggccaagggcttggtaccagaggatgatagc
aaagacaaaatcggacccagcaaacccagcgagaattcacagacttctcagcagccgtcc
cactctacagcaccaaccccacccaccagctctcaatcaatgacttccatccctcgacct
ccccctgtgcgtcacccacctttgccagcaccagtcccttcaccagtgcagccacggcct
cccgcgatgccccctccaattcgaactacagttatgtctgctgttccagtcatgcctcgt
cctcccatgacttctgtagttcgcctgcctcctgggtctgttctggcccaaatgcctccc
atattacatgcgccacggatcaatgtcatgcagatgcagcacaacgctcaggccatgatg
ggcccccgtccaccaccgatgatggtgccaacaacgtttgtccctgcccctcctgcccca
gtgcctaatcaacagatgcaacaggtgcacccaccgccccccatggatgatgagccttca
tctaagaaattgaagactgaggacaacttaatgccggaggatgagttcctgcgcaggaac
aagggtccagttacagtcaaagtccaagttcctaacatgcaagacaagacggaatggaaa
ctaagtggacaggggctcatgtttactctcccactcacagaccaggtgtctgttattaag
gttaaaatacatgaagcaacaggaatgcctgctgggaaacagaaacttcaatatgaaggc
attttcatcaaagactcaaattcattggctttctacaacatggtaaacggatcagtcatt
catctggccttgaaagagagaggtggcagaaagaagtag
DBGET
integrated database retrieval system
