Pleurodeles waltl (Iberian ribbed newt): 138266187
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Entry
138266187 CDS
T10800
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
138266187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138266187
Membrane trafficking [BR:
pwl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
138266187
Protein recycling
Other Rab GTPase associated proteins
138266187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
138266187
NCBI-ProteinID:
XP_069070767
LinkDB
All DBs
Position
11:complement(825696090..825804684)
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AA seq
454 aa
AA seq
DB search
MMSQATEAWGIHFDQSDLLCKDGCGYYGNPAWHGYCSKCWRERSRKQQQQNALQDRFQKT
GVSPADGTTGYLFAKFEEKKNSEKWRRVNTVKKIFSSTKNSAKADVLPNSLAPKTSLPIG
TGDFKDFLKSLRKPATQFIQKQCVSFIESMQAKEGMLVEEQSDMVQDFYQSMINHFQGSP
TEECDRLMDYIEKMVMTRLYKSVFCPDNSQDEHKDLSIQRRIRSLHWVTPEMLRVPLDEV
KPEVNEKIFYAITAMIEIDSKRAPQDKLSCVSRASNSIFRAIQSSNHEPATADDFLSCLI
YAVLRANPPRLHSNLQYITRFCYQKRLMAGEAGYCFTSLCCAVAFIEKLDAPSLNLTREE
FDQYMEGQKSAVRNIPVCLIQSDWAGLKQIQQNQKILAELWSRQEMVIRGAQSLEQELKD
WCQCVGNEVQAIISRYPLETTLSSQHPEPGNGAQ
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtcaggccacggaggcctggggaatccactttgaccagtccgacttactgtgt
aaggacggctgtggatattatggcaacccggcatggcatggctactgctccaagtgctgg
cgtgagcgaagtcgtaagcagcaacagcaaaatgctctacaagaccggtttcaaaagacg
ggggttagcccagcagatggcacaaccggatacctttttgccaagtttgaagagaaaaaa
aacagcgaaaaatggaggcgagtgaatactgtgaagaagatttttagcagcactaagaac
tcggcaaaagcagatgtgctgccaaattcattggctcccaagacatctcttccaattggt
actggcgacttcaaagactttctgaaatctctcaggaaacctgctactcagttcattcag
aaacaatgtgtcagctttattgagagcatgcaagcgaaagagggtatgctggtagaggag
cagtcagatatggttcaggatttctatcagagcatgatcaaccattttcaaggctctcct
acggaggaatgtgatcgattaatggattatattgaaaaaatggttatgacccggctctat
aaatctgtcttttgcccagacaattcacaggacgaacataaggatctcagcattcagaga
agaatacgctctctgcattgggttactcctgaaatgcttcgagttccactcgatgaggtg
aaaccagaggtcaatgaaaaaatattttatgccataacagcaatgattgaaattgattcg
aaaagggctcctcaggataaattgtcctgtgtctcaagggccagcaactccatcttcaga
gcaatccagtcttccaaccatgaacctgccactgcagatgatttcctctcttgcctcatc
tacgctgttctgagagccaaccccccacgcctccattctaatcttcagtacatcacacgg
ttctgctatcaaaagcgactaatggctggagaggctggatactgttttaccagtctgtgc
tgtgctgttgcatttatcgaaaaacttgatgctccatccttaaacttaacacgagaggaa
tttgatcaatacatggaagggcaaaagtcagcagtgcggaatattccagtttgtcttatt
cagtcagattgggcaggactgaagcaaattcaacagaatcagaagatattagcagagctc
tggtctcgacaagagatggtcatccgaggggcgcagagtctggaacaagagcttaaagac
tggtgtcagtgtgttgggaatgaggtgcaggcgattatcagcaggtacccattagagacc
accttatcctcccagcatccagaacctggaaatggtgctcagtag
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