Pleurodeles waltl (Iberian ribbed newt): 138266365
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Entry
138266365 CDS
T10800
Symbol
DEPDC5
Name
(RefSeq) GATOR1 complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
138266365 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138266365 (DEPDC5)
Membrane trafficking [BR:
pwl04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
138266365 (DEPDC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
138266365
NCBI-ProteinID:
XP_069071191
LinkDB
All DBs
Position
11:943302438..943703919
Genome browser
AA seq
1610 aa
AA seq
DB search
MRTNKVYKLVIHKKGFGGSDDELVVNPKVFQHIKLGDLVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVAQVFRLRPYQDVHVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKRS
LVSTCAYITQKVEFAGIRAQAGELWVKSEKVTCGYISEGTRVVFRSTSAMVYILVQMSCE
MWDFDIYGDLYFEKAVNGFLSDLFTKWKEKNCSHEVTVVLFSRTFYDAKSIDEFPESHRP
AILQDHEERFYEDFYKVVVQSERREDWTSLLVTIKKLFIQYPVLVRLKGAEGFPPGHNST
SAQGNYLEAINISFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRSGPGDSRLGDDYNIPHWINHSFYTSKSQFLCNSFT
PRIKLAGRKPLCEKSKNGRDTAIGSPKDSENALPIQVDYDAYDAQVFRLPGPSRAQRPTT
FRPARERDRDSQTRKSSCSYDVSCSPSLQSRTLPLEEVRSQASDDSSLGKISNILLIPRP
HLQLYEASCSLGYTSNRDFLERMMESQQRDSSAPGRFHVGSAESMLHIRPGMYTPQRALI
NPFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAEMQGNGMRDVTHSSAEL
LELAYHEAAGRHVASRQPGDNISYLGGTGGMEEYSSSLASNGVRGRNAAISQGPQNKDTD
ANSLSTSPEPILILSAPPVVPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQSLQNDYTEG
CYDLVPEADMDRRDEDSVQMTAQQVFEEFICQRLMQGYQIIVNSKTRTSSVPVPPPLSSS
PLYSRGLVCRNRPEEDDKYWLSMGRTFHKVTSKDKIITVTRYLPKYPYESAQINYMYSLC
PLHSNSEFVPCWVEFSHERLEDYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACV
SATKRIMEGEAHCDIYGDKPRSDEEEWQLLDGFIRFVEGLNRIRRRHRSDRMIRKGAALK
GLQLPGSIPTHPPEPVGPPAGKKGTSALSALLEMEASQKILGEQQATMHSAKSSIQTAES
GITPPFVDSPRKDGAFFMEFVRSPRTAPTFNPQVSIDQTAPLLPDNSSVVVNSLQSSDKC
SVLPVGISTAGNAGEQGTGTVCATESSAQQVSGNASTLTSSSSLAEILEAMKNPTTGIQL
LSEHKGLSPYTFISAEVVHWLVNNVEWVQTQVIAIDIMQKMLEEGLIVHASGEALRTFIY
GFYFYKIVGEKEPDRAGPSQPNTWHTTAMDDFTAFQRKWFEVAFVAEELLHSEIPAFLLP
WLPSRPASYASRHSSFSRSFGGRSQAAALLAAQVPEQRTVTLDVDVNNRSDRLEWCSCYY
HGNFSLNAAFEIKLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDP
LRAQLFIPLNVSCLLKEGSEHLFDGFEPETYWDRMHLLQEAIAHRFGFIQDKYSASAFNF
PAENKPQYIHVTGTVFLQLPYSKRKYTSGQQRRRRNSTSSTNQNMFGEERIGYNWACNTM
LTKTWRSSATGDEKFADRLLKDFTDFCNNKDNRLCSFWTTCLDKMHASAP
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atgagaactaacaaagtttataagctggtcatccacaagaagggcttcgggggcagtgat
gatgagctggtggtgaaccccaaagtgtttcagcacataaagctgggggacctagtagag
attgctcatccaaacgacgagtatagccccctgctgcttcaggtcaagtcattaaaagaa
gatcttcagaaagaaacaatcagtgttgatcagacggtggcccaggtgttccgtctcaga
ccctatcaagatgtccatgtgaacgtcgttgacccaaaggatgttactctagaccttgtg
gagctaacctttaaggaccaatacattgggcgtggagatatgtggaggctgaaacgaagc
ttggtcagcacgtgtgcgtacatcacacagaaggtagagtttgctggcatccgggcccag
gcaggagagctctgggtaaagagtgagaaggtgacatgtggatacatcagtgagggcacg
cgggtcgtcttcagatccacttcagcaatggtgtatattttagtccagatgagctgtgag
atgtgggactttgatatctatggtgacctgtacttcgagaaggcagtgaatggcttcttg
tccgatctcttcacaaagtggaaagagaagaactgcagccatgaagtgacagtcgtactc
ttttccagaacgttctatgatgccaaatccattgatgagtttcctgaaagccatcgtccc
gccatccttcaggatcatgaagaacggttctatgaggatttttacaaagtggtggtacaa
agtgaaagaagagaggattggacatctttattagtcaccattaaaaaactcttcattcaa
tacccagtgctggtgcgtctgaaaggggcagagggcttccctccaggccataactccact
tctgcacaaggcaattatctggaagccatcaatatctcctttaacgtctttgacaaacac
tacataaaccgtaacttcgatcggacggggcagatgtcagtcgtaatcacacccggggtg
ggtgtctttgaggtggatcgattgcttatgattctcaccaaacagcgcatgattgacaat
gggatcggcgtggatttggtgtgtatgggcgagcagcctctccatgctgtccctcttttc
aagcttcacaaccgtagtggccccggtgattctcgcctgggagatgactacaacattcca
cactggatcaaccacagtttctacacgtccaagagccagttcctctgcaatagcttcaca
cctcggatcaagcttgcaggacgcaagccactctgtgagaaatcaaagaatggcagagac
acagcgataggttctccgaaagattctgaaaatgccctccccatccaggttgattatgat
gcctatgacgcacaggttttccgccttcccggaccgtccagagctcaacggcccactacc
ttcaggccagcacgagagcgggaccgagatagccagacacggaagagctcttgctcctat
gatgtgtcctgcagtccctccttgcagagtcgcaccctgccactggaggaggtgaggagc
caggcctctgacgacagttcccttggaaagatctccaacatccttctcatcccacggcct
cacctgcaactatatgaagccagctgctccttgggatacaccagcaacagagacttcctt
gaaaggatgatggagtctcagcagcgcgattctagtgctccaggcaggttccacgtgggt
agtgcagagtcgatgctgcatattcgacctggcatgtacactcctcagagagcactgatc
aaccctttcgccccatctcgcatgcctatgaagctaacctcaaacaggaggcgttggatg
cacactttcccagttggtccttctggagaggccattcagatccatcaccagacccgccag
aacatggcagagatgcaggggaatgggatgcgcgacgtgacgcacagctccgctgagcta
ctggaactggcataccatgaagcagctggcaggcatgtggcttctcggcagccaggggac
aacatatcttaccttggaggcactggtgggatggaggaatattccagcagtttggccagc
aacggagttcgaggccgcaatgcagctataagccaaggaccccagaacaaggacacagat
gcaaactcactgtctacctccccagaacctattctgatactgtctgctccccctgtagtg
ccaggcttctgttgcacggtcggggtggactggaagtctctcaccaccccggcttgcctt
cctctcacaacggattacttcccggaccggcagagcttgcagaacgattacaccgaggga
tgctacgaccttgtccctgaagctgacatggacagacgagatgaggattcagttcagatg
acggcccaacaggtatttgaagagttcatctgccagcgactcatgcagggctatcagatc
attgtgaacagcaagactcgaacttccagtgtaccagttccaccacctctcagcagcagc
cccttgtacagccgtggtcttgtctgccgtaacagaccagaggaggatgacaagtactgg
ttgagcatgggacgtacatttcataaggtcacttcaaaggataagatcatcacagtcact
cgataccttccaaagtacccctatgagtctgcccagatcaactacatgtacagcctgtgc
cccttacactccaatagtgagtttgttccatgttgggtcgagttttcacacgagaggctg
gaggattacaagtggaattacctggatcagtacatctgctcggctggctccgaggacttc
agcctaattgaatctctcaagttctggaggacacgcttcctgctgcttccggcgtgtgtt
agtgctacgaagcgcatcatggagggagaggcgcactgtgacatatacggagacaagccg
cgctccgacgaggaggaatggcagctcctggacggcttcattcggtttgtggaaggctta
aaccggatacggcggcgtcaccgctcggaccggatgatccggaaaggggctgccttgaaa
ggtctgcagctaccagggtcaatccccacacatcccccggagccagtaggacctccagct
gggaagaagggcacatcggctctttcggcacttctggagatggaggctagccaaaagatc
ttgggcgagcagcaagctaccatgcactcagccaagagctctatccagactgcagaaagt
ggcatcacacccccttttgtggacagtccccgcaaggatggggccttctttatggagttt
gtgcgtagtccgcgcacagcccccaccttcaacccacaggtttctattgaccagactgct
cctctacttcctgacaacagcagcgtggtggtgaattcccttcaatcctcagacaagtgc
agtgtgttgccagtggggatcagcactgctgggaatgcaggggaacaaggaacaggcaca
gtatgcgctaccgagagcagtgcccagcaggtgtcggggaacgcaagcactttgacgtca
tcctcttccctggcagaaatcttggaagccatgaaaaatccaaccaccgggatccaactg
ctctctgagcacaagggtctctcaccgtacaccttcatcagtgccgaggtcgtacactgg
cttgtgaacaacgtggagtgggtgcagacacaggtcattgccatcgacattatgcagaaa
atgctggaagagggcttgattgtccatgcatctggtgaagcccttcgcactttcatctat
ggattctatttctacaagattgttggggagaaggagccagatcgggcaggaccctcgcag
cccaacacctggcacaccacggctatggacgatttcacagcattccagaggaagtggttt
gaggttgcatttgtggcagaggagctactgcactcggaaatcccagcctttctcctgccc
tggttgcccagccgtcccgcttcttatgcaagtaggcacagctcctttagccgcagcttt
ggaggacggagccaggcagcagcattgttagcagctcaagtgcctgagcagaggacagta
acactggatgtggatgtcaacaaccgaagtgaccggctggagtggtgcagctgctactac
catggaaatttctcattgaatgccgcttttgagatcaagctgcattggatggcagtgaca
gcagcagtgctctttgagatggtccagggatggcatcgcaaggccacatcctgtggattt
ttactggttccagtcctagaaggaccttttgcactgcctagttacctctatggggatcca
ctccgtgcccagctcttcatccctttgaatgtcagctgcctgctcaaagagggctcggaa
cacctttttgatggctttgaacccgaaacctactgggatcgcatgcaccttctgcaggag
gccattgcgcacagatttggctttatccaggataagtactctgcatctgcattcaacttt
ccagctgagaacaaaccacagtatatccatgtgacggggactgtgtttctgcagctgcca
tactccaagcgcaagtatacctctggacagcagcgtaggcggcgtaattccaccagctcc
accaaccagaacatgtttggtgaagaacgaattggctacaactgggcttgcaacaccatg
cttaccaaaacctggcgctccagtgccactggagatgagaagtttgctgaccggctactg
aaggactttacagatttttgcaataacaaagacaaccgtctgtgttccttctggactact
tgcctggacaagatgcatgcaagtgctccctga
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integrated database retrieval system
