Pleurodeles waltl (Iberian ribbed newt): 138266439
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Entry
138266439 CDS
T10800
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04142
Lysosome
pwl04144
Endocytosis
pwl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
138266439
04142 Lysosome
138266439
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
138266439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138266439
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pwl04147
]
138266439
Membrane trafficking [BR:
pwl04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
138266439
Exosome [BR:
pwl04147
]
Exosomal proteins
Proteins found in most exosomes
138266439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
Gp18_dom_I
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
138266439
NCBI-ProteinID:
XP_069071307
LinkDB
All DBs
Position
11:complement(968771851..969150257)
Genome browser
AA seq
1683 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSEPNT
PIRRPISAESAIMNPASKVIALKASQMPAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWIS
VNTVALVTETAVYHWSMEGDSQPQKMFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQN
RVVGAMQLYSVDRKVSQPIEGHAAAFADFKIEGNSKPSTLFCFAVRGQGGGKLHIIEVGQ
PATGNQPFVKKAVDVFFPPEAQTDFPVAMQIGTKHGVIYLITKYGYIHMYDLESGVCIYM
NRISADTIFVTAPHEPTSGIIGVNKKGQVLSVCVEEENIVNYATSVLQNPDLALRMAVRS
NLAGAEELFARKFNTLFAQGNYSEAAKIAASAPKGILRTADTIRKFQTVPAQPGQASPLL
QYFGILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLA
LSVYLRANVPNKVIQCFAETGQFQKIVLYAKKVAYTPDWIFLLRSVMRVSPEQGLQFSQM
LVQDEEPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQV
ADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFF
GSLSVEDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTNSLVELFESFKSYEGLFYFL
GSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLI
IVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVIGGLLDVDCSEDVIKNLIMI
VRGQFSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLR
ENPFYDSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPEL
WANVLEESNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLEN
SVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKF
DVNTSAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPS
AYMEVVQAASKNSNWEDLVKFLQMARKKSRESYVETELIFALAKTNRLAELQEFVSGPNN
AHIQQVGDRCYEEGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKE
VCFACVDGTEFRLAQICGLHIVIHADELEELISYYQDRGYFEELISLLEAALGLERAHMG
MFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAI
ITMMNHPTDAWKEGQFKDIITKVANVELYYRALQYYLDFKPLLINDLLMVLSPRLDHTRT
VSYFSKVDQLPLVKPYLRSVQNHNNKGVNEALNNLLTEEEDYQGLRASIDAYDNFDNISL
AQRLEKHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDMELAETLLQ
WFLEQGKQECFAASLFTCYDLLHPDIVLELAWRHNIMDFAMPYFIQVMREYLSKVDKLDA
AESLRKEEEQVAEPTPIVFGQQLMLTAGPNAVPPQANFPYGYTAPPGFTQPAAAPPPAYG
FNM
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgcccatccgcttccaggagcacttccagctccagaacctgggcatt
aaccctgcaaacattgggttcagcaccctcaccatggagtctgacaagttcatctgcatc
cgggagaaagtgggggagcaggcccaggtggttattatcgatatgagcgagccaaacacc
cccatccgccgtcccatatcagcggagagtgccatcatgaatccagcttccaaggtcata
gctctgaaagcatctcaaatgccagcggggaagaccttgcagatcttcaacatcgagatg
aagagcaagatgaaggctcacaccatggcagaggaggtcatcttttggaagtggatctcc
gtgaacaccgtggcgctggtgacggagacggcggtgtaccattggagcatggagggcgac
tcgcagccgcagaagatgttcgaccgccacgccagcctggccggctgccagatcatcaac
taccgcacggatgagcaacagaagtggcttctcctgatcgggatctccgcacaacaaaac
cgcgtggttggtgcgatgcagctctactctgtggacaggaaggtctcgcagcccatcgag
ggccacgcggcagcatttgcagatttcaagattgagggcaactccaagccttccaccctc
ttctgcttcgctgtccgtggtcaggggggaggcaagcttcacatcatagaggtgggccag
ccagcgaccgggaaccagcccttcgtgaagaaagccgtggatgtcttcttccccccggag
gcacagactgacttccccgtggccatgcagattgggacaaagcacggtgtgatttacctg
atcacaaagtacggctatattcacatgtatgacttggaatccggggtttgcatctacatg
aaccgtataagtgccgacaccatctttgtgactgcaccacatgagccaacgtctggaatc
atcggtgtgaacaagaaagggcaggtgctgtctgtctgtgtggaggaagagaacattgtg
aactatgccaccagtgtgcttcagaacccagacctcgctctgcgcatggccgtgcgatcc
aaccttgctggcgccgaggagctttttgcaaggaagtttaacactctcttcgcacaggga
aattattctgaggcggcaaaaattgcagcatctgcacccaagggaatccttcgcacagct
gacaccatcaggaagttccagacagttcctgcccagcctggtcaggcctctcccctcctg
caatacttcgggatccttctggaccaaggacagctgaacaagtttgaatccttggagctc
tgccggccggttctgcagcagggacgcaagcagcttttggagaaatggctgaaggaagac
aagctggagtgctcagaagagcttggagacctggtgaaggccgtggaccccaccctggcc
ctgagtgtgtaccttcgcgccaacgtgccaaacaaagtcatccagtgcttcgcggaaacc
ggacagtttcaaaagattgtgctttatgctaaaaaggttgcctacaccccagattggatt
ttccttctccggagtgtgatgcgtgttagcccagagcagggcctgcagttctctcagatg
ctggtacaggatgaggaaccattggccaacattaatcagatcgtggatgtgttcatggaa
aacagcctcatccagcagtgcacctccttccttctggacgctttgaagaataaccgccct
gcagaggggcacctgcagacccgcctgctggagatgaacctcattcatgccccgcaggtt
gctgatgccatccttgggaaccagatgtttacacactatgaccgggcccacattgcccaa
ttgtgtgaaaaggctggtctgctgcagagggcactggagcattacactgacctttatgat
atcaaacgggcagttgtccacacacacctgttgaacccagagtggcttgtgaacttcttt
ggctctctctctgtggaggattcagtggagtgcctgcgtgctatgttgtctgctaacatc
cgccagaacctgcagctgtgtgtgcaggtggcctccaagtaccatgaacagttgggcaca
aactcactggttgagctctttgagtcatttaagagttacgaaggcctcttctacttcctg
ggttccattgttaacttcagccaggaccctgatgtccacttcaagtatatccaagctgcg
tgcaagaccgggcagatcaaggaggtggaacgcatctgcagagaaagcaactgctacaat
cctgagcgtgtcaagaacttcctcaaggaggccaagttaacggaccagctccctttgatc
attgtctgcgacaggtttgatttcgtccacgacctggtgctgtatctgtaccgtaacaac
ctgcagaagtacatcgagatctatgttcagaaggtgaaccccagccgtattccagcagtc
atcggaggtctccttgatgtggattgttctgaagatgtcattaagaacctgatcatgatt
gttcggggtcagttctcgacagatgagctagtggctgaagtggaaaaaagaaacagactg
aagctacttctgccctggctagagtcccggatacacgagggctgcgaggagcctgccaca
cacaatgcgctggcgaaaatttacattgacagcaacaacaaccccgagcgcttcctgcgg
gagaatcccttctatgatagccgcgtagttggcaagtactgcgagaaacgtgacccacac
ctggcctgtgtggcttacgagcggggacagtgtgacctcgagttgattaaggtttgcaat
gagaactcgctgtttaagagtgaagcacgctacttggtgaggcggaaagatcctgaactc
tgggcaaatgtcctcgaggagagcaacccattccggaggcagcttatcgatcaggtggtg
cagacagccctatcggagactcaggaccctgaggaggtgtcagtcacagtgaaagccttc
atgactgctgacctgcccaatgaactgattgagctgctggagaagattgtgctggagaac
tccgtattcagtgaacacagaaatctgcaaaaccttctgatcttgacagcaattaaagca
gaccgcactcgtgtgatggagtatatcaatcgcctggacaattatgatgcccccgatatc
gccaacatcgccattagtaatgagctgtttgaggaggcttttgcgattttccgcaagttt
gatgtcaacacatctgccatacaggttctcatcgaacatatcggaaacctggaccgtgcc
tatgaatttgctgaaaggtgcaatgagcctgcagtgtggagccagctggcacgagcacag
ctccagaaagaccttgtgaaggaagctattgactcttacataaaggcggatgatccttca
gcatacatggaggtggttcaggctgccagcaagaacagcaattgggaagatctggttaag
tttttgcagatggcaaggaaaaagtcccgggagtcgtacgtggagaccgaactcatcttt
gctctggcgaagaccaaccgcttggcagagctgcaggagtttgtcagtggacccaacaat
gctcacatccagcaggttggcgaccgttgttacgaggaaggcatgtatgatgcagcaaag
ctactgtataataatgtgtccaattttgcccgcttggcatcgacgttggtgcacttggga
gagtaccaggcagctgtggacagtgcccgaaaagccaacagcacaaggacgtggaaggag
gtgtgcttcgcctgtgtggacggcacagagttcaggctcgctcagatatgtggcttgcac
attgtgatccatgccgatgagctggaggagctgatcagttattaccaggatcgtggctac
tttgaggagctgatttcactgctggaggctgctctgggcctggagcgtgcccacatgggt
atgttcaccgagctagccatcctatactccaagttcaaacctcagaagatgcgcgagcat
cttgagctcttctggtcccgagtaaatattccaaaggttctcagagcagccgagcaggcc
catctgtggggcgagctagtcttcctgtacgataagtatgaagagtacgacaatgcaata
attaccatgatgaatcaccctactgatgcctggaaggaagggcagtttaaagacatcatc
actaaggttgccaacgtggagctgtattacagagccctgcagtactacctcgactttaaa
ccactcctcatcaatgacttgctgatggtgttatcgcctagactagaccacactaggact
gtcagctacttctccaaggtggaccagttgccgcttgtgaaaccatatttgcgttcggtg
cagaaccacaacaacaaaggtgtcaatgaggccttgaacaatctgctgacagaggaggag
gattatcagggtcttcgggcttccattgatgcctacgataacttcgacaacattagcctg
gcacagcgcctggagaagcacgagctgatagagttcagacgaattgcagcctatttgtac
aaaggcaacaaccgctggaaacagagtgtcgagctttgcaagaaagaccgtctttacaag
gatgctatgcagtatgccgcagagtccaaggatatggagcttgcggagacattgctgcag
tggttcctggagcaaggcaagcaggaatgctttgcagcatctctcttcacctgctatgac
ttgctgcatccagacatagttctagagctggcctggaggcacaacataatggactttgcc
atgccttacttcatccaggtgatgcgggaatacctgtcgaaggtggacaaacttgatgct
gctgaaagtctaaggaaggaggaggagcaggtcgcagagcccacacccatagtctttggc
caacaactgatgttgacagcgggtcctaatgctgttccaccgcaggccaatttcccgtat
ggttacaccgcaccaccaggatttacccagccggctgcagcacctcctcctgcatatggt
ttcaacatgtag
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integrated database retrieval system
