Pleurodeles waltl (Iberian ribbed newt): 138266848
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Entry
138266848 CDS
T10800
Symbol
GIGYF1
Name
(RefSeq) GRB10-interacting GYF protein 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138266848 (GIGYF1)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
138266848 (GIGYF1)
Surveillance factors
Other surveillance factors
138266848 (GIGYF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
138266848
NCBI-ProteinID:
XP_069071644
LinkDB
All DBs
Position
12:complement(691434588..692091430)
Genome browser
AA seq
1024 aa
AA seq
DB search
MAAETLNFGPEWLRALASGGGVTSPPPSPAMPKYKLAEYRYGREEMLALYVKDDKVPEEM
EDKEFAVILQDEPLQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGAGLPPGGVARGRGS
ARGRGRGRGESGFYQRSIEDGEVAFGRGAREIHRSQSWDDRGERRFEKPARRADGVRAVF
DDSSATARKEFARSDSDNWRTLREEQQQQQQQQQQQQQQQEEDDENGWRLAVARRDSERW
RSTSPDAPRSAGWREHGGSRKKFDFEFRDKEDERGQRRNRANSDSFEDDKDGLPEWCMDD
EDDEMGTFDSSGAFMSLKKNPRDAIPEEQELDFQGLEDEDERLDGKEDGEETSEGNAKEV
ENDAKEMIQSADERPTETFSSSPTPAPPSDLTWVPGHPFAAATTSECESALTNLSESEVL
TPLINNEKALKSVAEELESFSQPSQLSPGVLANLSSSPSSTTTAAATEFSVGDPEDDDGM
KHLQQEAEKLVASLQDSSLEEERFTQTMQEQRNTAAALPLSHEAAMKWFYKDPQGEIQGP
FTTQEMAEWFQAGYFAMTLHVKRGCDEGFQPLGEVIKMWGRVPFAPGPSPPPLLGNMDQE
RLKKQQELAAAALYQQLQHQQYLQLMNRSGEPGIIPSMNRSMSVPDSGSMWDLHTSASQQ
AGGEASLWDLPINSSTQGPILEHLQLQHKLQERRDAELRAKRVAEEERKRREEKRLQEEQ
KRREEEELFRRKQCRQQQELLLKLLQHSQQQSSPPLWNSHSKSISMKAVLELQQQENERL
LQKQQRVQQRVHGGLTMSSSGMASMSSQWGESSPLWGGHEKNSSLGPWEEGLKNAGAGMR
SIGLKNSRSSPSLSDSYGIPSRQSRKKTEEEEKLLKLLQGIHKPQDGFTQWCEQMLHALN
TSNNLDAATFVSFLKEVESPYDVHDYIRSYLGDTLEAKEFAKQFLERRAKQKANQQRQQE
SPWLSPSSLQSMFQANHNSKQPSFDSSQASKMKKRPVMLHADPSILGYSLHSSSGGEMET
VEDY
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgagactctcaactttggaccagaatggctccgtgcactggccagtggcggt
ggtgttacatcacctcctccttctcctgccatgccaaagtacaagttagctgagtaccgt
tatgggagagaagaaatgttagcactttatgtcaaagatgataaggttccggaagaaatg
gaagataaagagtttgctgtcattcttcaggatgagcctcttcagcctcttgcgcttgtc
cctttaacagaggaagaacagaggaacttttcgatgtctgtgaacagtgttgctgtgctg
cgactcatgggtaaaggagctgggctccccccaggaggtgtcgcccgcgggcggggcagt
gcccgtggaagaggccggggtagaggagagagtggattttaccaaagaagtattgaagat
ggagaggtggcctttggtcgtggagcccgagagattcataggagtcaaagctgggatgat
aggggagagcgaaggttcgaaaaaccagcccggcgtgccgatggagtgcgtgctgtattt
gatgactccagtgccacagctcgaaaagagtttgcgcgctcagacagtgacaactggcga
actcttcgtgaggaacagcagcagcagcagcagcagcagcagcagcaacagcagcagcag
gaagaggatgatgaaaatggctggagactggctgtggcaagaagagatagtgaaaggtgg
cggtccaccagcccagatgctcctcgttctgcaggctggagagagcatggaggttcacgg
aaaaagtttgactttgaattccgggataaggaagatgaacgagggcaacggaggaatcga
gctaacagtgacagctttgaagatgacaaggatggtttgcctgaatggtgcatggatgat
gaagatgatgaaatggggacctttgactcatcaggggcttttatgtccctaaagaagaat
ccaagggatgccataccagaggagcaggagctggacttccaaggattggaggacgaagat
gagaggctggatggaaaggaagatggagaggaaaccagtgaaggaaatgctaaagaagta
gaaaatgatgctaaagaaatgatccagagtgctgatgaaaggcctacagaaacattctcc
tcttctcccacgcctgctcctccttcggacctcacctgggtccctggacacccttttgct
gctgccaccactagtgaatgcgaaagtgcgctgactaatttgtctgagtccgaagtcctt
actccactgataaacaatgagaaggctctgaagtcagttgctgaagagcttgaatcattc
agccagccatcccagctaagccctggtgtgcttgccaacttgtcctcttctccttcctcc
accacaacagctgctgctactgaattttctgttggggaccccgaggatgatgatggcatg
aagcatcttcagcaggaggccgagaagttggtggcttctttgcaggacagttctttggag
gaagaaaggtttacacagactatgcaggagcagcgaaacacggcggccgccttgccactc
tcccatgaagctgctatgaagtggttttacaaggatccccagggagagatccagggtcct
ttcacaacacaggagatggcggagtggttccaagctgggtattttgccatgactcttcat
gtcaagagaggctgtgacgagggcttccagccccttggtgaagttattaaaatgtgggga
agagtgccttttgctcctggaccatcaccaccaccgctgctgggtaacatggaccaggag
agactgaagaagcagcaggagctggcagctgcagcactatatcagcagctccagcaccaa
cagtatctgcagttgatgaacagaagcggagagccaggaattattccatctatgaacagg
tcgatgtctgtgccagattcaggttccatgtgggacttacatacctcagcttcacagcaa
gcaggcggtgaagccagtttatgggatttaccaattaattcttcaactcagggtccaatc
ttagaacaccttcaactgcaacataaacttcaagaacgacgagatgcagaactcagggct
aagagggtggctgaggaggagaggaaacgccgggaagagaagagactgcaggaggagcag
aaacgtcgtgaagaagaggagctgttcaggaggaaacagtgtcgccaacagcaggagctt
ctcctgaagttacttcagcatagccagcaacagagttctccacccctttggaacagccac
tccaagagcatatccatgaaggcagtccttgagcttcagcagcaggagaatgagcgcctg
ttgcagaagcaacagcgggtgcagcaacgagtgcatggaggtcttaccatgagcagctca
ggcatggctagcatgtcttcccagtggggggagtccagccccttgtggggaggccatgag
aagaacagtagccttggtccctgggaggagggactgaagaatgctggtgctggcatgaga
agcattgggctcaagaatagccgaagcagcccgtccctgagtgattcttacggtatcccc
agccgccagagccggaagaagactgaagaggaagagaaacttctcaagttactgcaaggc
attcataagccacaggacggctttacacagtggtgtgaacagatgctgcatgctcttaac
acctccaacaacctggatgcggcaacttttgtctcattcctaaaagaagtagaatccccg
tatgatgtgcatgactacatcagatcctacttgggggacacccttgaagccaaagagttt
gccaagcagttcttagagcgccgtgccaaacagaaagccaaccagcaacgacagcaggaa
tctccgtggcttagtcccagcagcctccagtccatgtttcaggcaaaccataactcgaag
cagccatcctttgacagcagccaagctagcaagatgaaaaagcggcccgtgatgcttcac
gctgatcccagtattttgggctactcgctacacagctcttcgggaggcgaaatggagaca
gttgaggactactga
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