Pleurodeles waltl (Iberian ribbed newt): 138266875
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Entry
138266875 CDS
T10800
Symbol
CHRNB1
Name
(RefSeq) acetylcholine receptor subunit beta
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
138266875 (CHRNB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pwl04040
]
138266875 (CHRNB1)
Ion channels [BR:
pwl04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
138266875 (CHRNB1)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
138266875
NCBI-ProteinID:
XP_069071691
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Position
12:696781800..696828422
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AA seq
496 aa
AA seq
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MAGRALLTLALCLGALAGTKALEGEAKLLAALFKDYNVYVRPVKTAHEKALVRIGMTLSH
LISLNEKNEELTTKVYLNLNWKDYRLSWTPSEYENMETLRVPSDKVWLPDIVLMNNNDGN
FDIALPVDVLVSHDGEVSWSPPALYRSSCSIAVKYFPFDWQNCSMIFRSYTYDTTEMTLE
LAVDEKGREVKEVVISENTFVENGQWEIRHKAACKNTLSGDPLYEDISFYLVIRRKPLFY
IINIIIPCILITILAIFVFYLPPDAGEKMTLSIFALLTLTVFLLLLADKVPETSLSVPII
VNYLMFTMILVTFSVILSVVVLNLHHRSPNTHAMPLWVRRIFIHLLPRYLHLQRPKPEPP
LKIAPSPLLGKRETAVKATRANDEYFIRKPCSDFIFPKLNRYHIDPFSTDMRKFIDGPSH
CLVLPPDLKSALTAITYVAEQLQGQEDYDALKEDWQYVAMVVDRLFLWTFIVFTSLGTLA
IFLDASFHHPPDVAFP
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcgtgcgttgctcacgctggcgctgtgcctcggggcgctagcaggcaccaag
gccctggagggagaggcaaagctgttggcagcacttttcaaggactacaacgtgtatgtg
agaccggttaagacggcccatgagaaggcactggtgcggataggcatgaccctgtcccat
ctcatcagcttgaatgagaaaaatgaggagctcaccaccaaggtctacttgaatctgaac
tggaaagattaccggctgagctggaccccgtctgaatatgagaacatggagacccttcga
gtgccctcggacaaggtctggctgcctgacatcgtcttaatgaacaacaatgatgggaat
tttgacatcgccctgccggtggatgttctggtgtcgcatgatggcgaggtcagctggtcc
ccgcctgcgctgtatcgcagcagctgcagcattgcggtgaagtacttccccttcgactgg
cagaactgcagcatgatattccgctcctacacctatgacacgacggagatgacactggag
ctggcagtggacgagaaaggccgagaggtgaaggaggtggtcatttctgaaaacaccttt
gtagagaacggtcagtgggaaattcgccacaaggccgcatgcaagaacacgctatccggg
gacccgctgtacgaggatatcagcttctacctcgtgatccgacgcaagcccctcttctac
atcatcaacatcatcatcccctgcatcctgatcacgatcctcgcaatcttcgtcttctac
ctcccacctgacgcaggtgaaaagatgactctgtccatcttcgcgctgctgaccctcact
gtcttcctgcttctgctggccgacaaggtgcccgaaacctccctgtccgtgcccatcatc
gtcaactacctgatgtttaccatgatccttgtcaccttctccgtcatcctgagtgtggtg
gtgctcaacctccaccaccgctcgcctaacacgcacgccatgccactgtgggtgcgcagg
atcttcattcacctccttcctcgatacctccacctgcagaggcccaaacctgagcctccc
ctgaagatcgcgccctccccactgctgggaaaacgcgagactgctgtcaaagccaccagg
gccaacgacgaatacttcatccgtaaaccgtgcagcgacttcatctttcccaaactcaac
aggtatcacattgatccgttttccacagatatgcgaaagttcattgacggtcccagccac
tgcctggtcctaccaccagacctgaagtctgcgctcacggcgatcacgtatgtggccgag
cagctgcagggacaggaggactacgatgctctgaaggaggactggcagtacgtggccatg
gtggttgaccggctcttcctatggaccttcatcgtcttcaccagcctgggcactctcgcc
atcttcttggacgccagtttccaccacccgcctgatgttgcgttcccatga
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