Pleurodeles waltl (Iberian ribbed newt): 138266879
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Entry
138266879 CDS
T10800
Name
(RefSeq) transcription factor Sox-19b-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138266879
Transcription factors [BR:
pwl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
138266879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
138266879
NCBI-ProteinID:
XP_069071698
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All DBs
Position
12:697209168..697221564
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AA seq
280 aa
AA seq
DB search
MYMMEQPLKGHMAGQMQQGLAPEKQRPADPAPDPMDKVKRPMNAFMVWSSSQRRKMAQEN
PKMHNSEISKRLGAEWKLLSDAEKRPFIDEAKRLRATHMKDYPDYKYKPRRKSKAALKKD
SAKYALPAGAMLGHGPGGSPRMEPYAWASGTAYAPMQGDSLAYQQQYHRYDLAGLQYPPG
LSPGQNYLNGGGAYSLQYGAPTQQTSPGMNIKQEPGSHSPGPVATHHRSGLQTGDFRDMI
SMYGLTSSDMSESAGQRAYHASQAHYQNLMLNGTSPLTHL
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgtacatgatggagcagccgctgaagggccacatggctggccagatgcagcaggggttg
gcccccgagaagcagcggcccgccgacccggcccctgaccccatggacaaggtgaagcgg
cccatgaacgcgttcatggtgtggtccagcagccaacggcgcaagatggcccaggagaac
ccaaagatgcacaattctgaaatcagcaagcgcctgggggccgagtggaagcttctaagc
gacgccgagaagaggcccttcatcgacgaagccaagcgcctgcgggccacgcacatgaag
gattacccggactataaatacaagccccggcgcaagagcaaagcggccctgaagaaggac
tcggccaagtacgcgctgcccgccggggccatgctgggccacgggcccgggggcagcccg
cgcatggagccctacgcctgggcctcgggcaccgcctatgcccccatgcagggcgactcc
ctggcctaccagcagcagtaccaccgctacgacctggccggcctgcagtatcctcccgga
ctgtcaccggggcagaactacctgaacggaggcggcgcctacagcctgcagtatggagcc
cccacgcagcagacgtcccctgggatgaatattaagcaggagccggggtcgcactcacca
gggcccgtggcgacccaccaccgcagtggactgcagaccggcgacttccgggacatgatt
agcatgtacggtctgaccagcagtgacatgtctgaatccgcgggccaacgggcctaccac
gcgtcacaggcccactaccagaacttgatgctgaatgggacctccccattgacgcacctc
tag
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