Pleurodeles waltl (Iberian ribbed newt): 138267072
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Entry
138267072 CDS
T10800
Name
(RefSeq) cohesin subunit SA-2-like
KO
K13055
cohesin complex subunit SA-3
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
138267072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pwl03036
]
138267072
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Meiosis-specific proteins
Cohesin complex and associated proteins
138267072
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
RVT_1
HEAT_EF3_GNC1
AHSP
Motif
Other DBs
NCBI-GeneID:
138267072
NCBI-ProteinID:
XP_069072021
LinkDB
All DBs
Position
12:complement(101470346..102611218)
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AA seq
1241 aa
AA seq
DB search
MTLKILFFFFFLQVCKRSRKTGGNVEKRRGPVRVVGTAQAGAPLQPSDIFEAVKLSKSAM
QSVVDDWLDIYKQDREAGLLDLINFIMQACGCKGVVSQEMLQKYQNAEIIHKMTEKFDEE
SADYPLSMTSSPWKKFKANFCEFIVTVVRQCQYNILYDEFLMDTLISLLTGLSDSQVRAF
RHTSTVAALKLMTALVDVALNLTVHKDNNQRQYDSERSKAIDKRATERLEALLLKRKELQ
ENLEDIENMMNAIFKGVFVHRYRDSIPEIRTACMEEIGVWMKSYSYSFLNDGYLKYIGWT
LNDKQGHVRLTCLKALQGLYSQKDMAGKLELFTSRFKNRMVSMVLDKEDDVSVEAVNLLT
LIMQNMEDVLTSEDCENVYPLVFASNRAVASAAGEFLFKKLLSLTVFQEVPKGPNQLESL
PFFLLLVAFFLESEYHEHAAYLVDSLWDSAAPFLKDWEGLTDLLLEETSEEDELNDQQEG
ALIEILVSTMRQAVEGHPPVGRVSGKKALSAKERKVQSDDKVKLTQHMILVLPQLLAKFS
ADTEKVAILLRAPHFLELEIYCTSRLEKYLDLLLKQIQEIVEKHTDQEVLEAAARALYVL
GNEELAIYNRVNIAVSQLIDRLVDRFQQEVEEIMQASEVDEDEIYNMSATMKRISVFHNA
HNMTRWELFNPCCQLLKRGIDTGEIPKQIMVPALKCAHFFILWELCQASTTRPKKEQLNT
LKQRLCMFSSLCENCLSDVDPGVREQAFVLLSDLLLMFSHQMTKSGQDFLQTLVYTPDAS
LQTELAGFLIDNVFIDLESDEDEALKIEILHKRRNLLAGYCKLIIYNVLDLNSATDVFKH
YVKYYNDYGDIIKETLSRTRQINKVQCARTLLLTLQQVFAEMVEDHGPSVIRSTQAFMDI
RDLGRRFAIMFGPDQLRNREPVVILHKEGIKFAFKDPPPAGADNVPQNLAFLDILCEFSF
KLLKQDKKVLLQYLEKTCESLPSTEKDSEPWIPLLAYRRSLSTEEETLSVVSRIGSKGST
MRQKKGPIPSAKRRRIDGELGHSAWFFTTENFKMLTLAQVFSALDQGDWMVALDLQDAYF
RIPILPVKTLPAVQKELEVDEEEAGTWLGQETLPSLTQEEQMKLNKSIYPREIKAVLKGC
NGGKAAGLDGIQVEFYNILGESIIPAMSELFEGIFGNGKHNLASWNKAIISLVLKPGKSP
VKCESYRPISLLNSDYKIFAKILLDRLSGKINGLIHPDQKG
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgactttgaaaatacttttctttttttttttccttcaggtctgtaagcgctcaaggaag
acaggtgggaatgtcgaaaaacggagagggcctgtcagagtagttggcacagctcaggct
ggggctcccttacagcccagtgacatctttgaggcagtaaagttatcgaaaagtgcaatg
cagtctgtcgtcgatgattggcttgatatttacaagcaggaccgggaggcaggacttctg
gatttgatcaatttcatcatgcaggcatgtggatgcaaaggtgtggtctcccaggagatg
ttgcagaaatatcagaatgctgagatcatccacaagatgactgaaaaatttgatgaggag
agtgccgactaccctctttctatgaccagtagtccgtggaaaaagttcaaagccaatttc
tgcgagttcattgtcaccgtggtgcggcagtgccagtacaacatcctgtatgacgagttc
ctcatggacacgctgatctccctgctgactggcctgtccgactcccaggtgcgcgccttc
cgccacaccagcaccgtggcagccctgaagttgatgactgcccttgtggatgtggctctt
aatctgactgtgcacaaagacaacaatcagcgacagtatgactcagagaggagcaaagcc
atcgacaagagggccactgagcggctggaggcgctgctgctcaaacggaaagagcttcag
gagaatctggaagatatcgagaacatgatgaatgctatattcaagggagtctttgtgcat
cgctacagggactccatcccagagattcgaacagcgtgcatggaagagataggcgtctgg
atgaagagttacagctactccttcttaaatgacggatacttgaaatatatcggctggact
ctgaatgacaagcaaggacatgtgcgtctcacctgcctgaaagcgttgcagggtctatac
agccaaaaggatatggcaggaaaactagagctgtttactagtcgcttcaagaacagaatg
gtatctatggtactggataaggaggatgatgtttctgtggaagctgtcaatctgctgact
ctcatcatgcagaacatggaggacgtgctcaccagtgaggattgcgagaatgtataccca
cttgtttttgcatcaaatcgggcagtggcatcagcagctggagaatttctttttaaaaag
ctcctcagtctgactgtattccaggaagtgcctaaggggcccaaccagttggagtccctg
cccttcttcctgctgcttgtggcattctttttggagagtgagtaccatgagcatgctgca
tatttggttgacagcctttgggatagtgcagctccattcttgaaggactgggagggacta
acagatctactgctcgaagaaacctctgaagaagatgaattaaatgaccaacaggaaggt
gccttaatagagattctggtgtccaccatgaggcaggcagtagagggtcacccacctgtt
ggcagagtttctggaaagaaggctctctcagcaaaggagaggaaagtccagtcagatgac
aaggtaaaactgacccagcacatgatcctggtactgccacagctcctggctaagttttca
gctgatactgagaaggtggccatcttgctgcgtgcgccgcacttcttagagttggagatt
tattgcaccagccgattggagaaataccttgacctcctgctgaagcagatccaggaaatt
gtggagaagcatacagatcaagaagtgctagaagcagccgctcgtgcgctgtatgtcctt
ggtaatgaggagctggctatctacaaccgcgtcaacattgctgtcagtcaacttattgac
cgccttgtggacagattccagcaggaagttgaggagataatgcaggccagcgaagtggat
gaagatgaaatatacaacatgtccgctacaatgaagcgtatctctgtcttccacaatgct
cacaatatgactaggtgggaactcttcaatccatgctgtcagctgctgaagagagggata
gacacaggagagatccccaaacagattatggtaccagctctcaaatgtgcccatttcttc
atcctgtgggagctgtgccaggcttcaaccacacgccccaagaaggagcaattgaacaca
ctgaagcagagattatgcatgttttcgagcctctgtgagaactgtctctctgatgtagac
ccaggagttagagagcaggcctttgttctgcttagtgacttactgctgatgttcagtcac
cagatgaccaagagcggccaagacttcttacagactttggtctacactccggacgcatcc
ctgcagactgaattggcgggctttctcatagacaatgttttcatcgacttggagagtgat
gaagatgaggctttgaagattgagatacttcacaagcgcagaaacctactagctggatac
tgcaaactaataatttataatgtgcttgatctgaactctgccactgatgttttcaaacac
tatgtgaagtattacaatgactatggtgatatcatcaaagaaactctgagcagaacccgt
cagatcaacaaagtgcagtgtgccaggacccttcttctcaccctgcaacaggtttttgca
gaaatggttgaggaccatggaccatctgtaatccgctccactcaggccttcatggatata
agggacctgggccgccgctttgccattatgtttggaccagatcagttacggaaccgtgaa
ccagtcgtcattcttcacaaggagggcattaagtttgctttcaaggaccctcctcctgct
ggtgcagacaacgtcccacagaacctggcctttctggatatcctatgtgaattttcattc
aaactgctgaagcaagacaagaaggtcctcctacagtatttggagaagacatgcgaatca
ctgccatcgacagagaaggacagtgagccctggattccacttctggcatacagacgctca
ctgagtacagaggaggagactttgtctgtagtcagtcgaataggcagcaaaggctccact
atgcgccagaagaagggcccaataccatctgccaaaagaagacgtatagatggtgagtta
ggtcactctgcatggttctttactactgagaatttcaagatgctcactttggctcaggtc
ttttctgccctagaccaaggagactggatggtagcattggacttgcaggatgcatatttt
cgtattcccatcttgcctgttaagacgttacctgcggttcagaaagagttagaggtggat
gaggaagaggcaggtacctggttagggcaagagaccctcccgagtctcacacaagaggag
cagatgaaattgaataaatcgatttacccgagggaaataaaggcagttctgaaaggatgc
aatggaggtaaagcagcaggcctagacggtatccaggttgagttctacaacatcctgggg
gagtcaatcataccagctatgtcagaattgtttgaagggatctttgggaatgggaaacat
aatctggcctcatggaataaggccattatctcactggttctgaagcctggcaaaagcccg
gtgaagtgtgaatcctataggccaatatcattattaaatagcgactataagatcttcgcc
aaaattctgttggatagattaagtggaaagataaacggtctgatacatccggaccagaaa
ggttaa
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