Pleurodeles waltl (Iberian ribbed newt): 138267165
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Entry
138267165 CDS
T10800
Name
(RefSeq) nuclear receptor ROR-alpha A-like
KO
K08534
RAR-related orphan receptor gamma
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138267165
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pwl03310
]
138267165
Transcription factors [BR:
pwl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
138267165
Nuclear receptors [BR:
pwl03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
138267165
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
138267165
NCBI-ProteinID:
XP_069072116
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All DBs
Position
12:complement(630943370..631194319)
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AA seq
699 aa
AA seq
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MLLIPGSLVAICIPSLSTSFLRRCSPTSPPSRQSAFLPPASQLTRTPRLPPFPNRASCVT
VYRRRTKETLHAPNTGRSAACHHASPRDTHGPFSCLNCHYTLTLQQAPDPPTAEQSNTNP
ELLSCILLNLRSLHKHATELWDLLNFTCSDIAFLTETWTNPASALAIAIPSGYKLHRKDW
PSCPGRGLAVTHKSSLTQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNMSYSC
SQQQNCQIDRTSRNRCQHCRLQKCLMLGMSRDAVKFGRMSKKQRDCLHAEVQKHRLQQEQ
QNIEVMHAEYPDSLTSGQFNMRSATDIMDDSKCSNTLLSRTRTHLSPNEAEVFPGSHRLN
KGENQQALNHPFSKGSNQDRVKMDIKANGLHTMERHSFLLDLSGARRTPIYEKPEEVDLC
SSSTFFWEMSNSSIMEIENLTQNVLNAHRQTCQFRFEDLQLLRWETFTRNEVYSYQRKSM
EEMWERCAWRITDAIQYIVEFAKKMDGFMQLSQNDQIVLLKAGAMEVLLVRMCRAFNYQN
NTVFFEGKYAGPELFKSLGCGELINNFFTFSQNMCTLGLLEPELALFAALVLVDSSRPFL
QEKDKVEQLQKNLELALKNLMRKSHREGILVKLPPKGKIRSLCIHHMEKLQYFQQMYPII
VHAVFPPLYKELFTIDYYEHEPCRAAPSLPISFSYNSSV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgctcctcatccctggtagcctagtggccatctgcatcccttcactatccacaagtttc
ctgcgccgctgcagccccactagccctccctcccggcaaagtgcttttctgccccctgcc
tctcagctgacccgaaccccacgcctccctccctttcctaacagggccagctgtgtgact
gtgtaccgaaggcgcaccaaagagaccctccatgcaccgaacacaggacgatctgcagct
tgccatcacgcatcaccaagagatacccatggaccattctcctgcctgaactgccactac
actctcaccctacaacaagccccggaccctcccaccgctgagcaatcgaacaccaaccca
gagcttctcagctgcatcctcctcaaccttcgctccctccacaaacatgccacagaactc
tgggacctgctgaacttcacctgctcagacatagccttcctcaccgaaacttggacaaac
ccagcatctgcactggccatcgccatccccagtggctacaaactgcaccgcaaagactgg
ccttcttgcccaggcaggggcctggccgtcacacacaaatcatccctcacacaaattgaa
gttatcccatgtaagatctgtggtgataaatcatcagggattcactatggagtaatcacc
tgcgagggatgcaagggctttttcaggagaagtcaacagagcaacatgtcctactcatgt
tctcagcagcagaactgccagattgacagaacaagtcggaaccgttgccagcactgtcgg
ttgcagaaatgtcttatgcttggaatgtctcgggatgctgtcaagttcggacgcatgtca
aagaaacagcgggactgcttgcatgcagaggtacagaagcatcgactgcagcaggagcag
caaaacattgaggtgatgcatgcagaatacccggatagtctcaccagcgggcagttcaac
atgagatctgctacagacattatggatgattctaaatgttccaacacccttctgtctagg
acaagaacacatctctctcccaacgaggcggaggtcttccctggttctcacaggcttaac
aaaggggagaaccaacaggcactcaatcatccattttccaaagggtccaaccaggaccgg
gttaaaatggacatcaaggcgaatggattacacacaatggagaggcattcctttctgctg
gacctcagtggggcgaggagaacccccatctacgaaaagccagaagaagttgacttatgt
tccagctctacatttttttgggaaatgtcaaactcctctataatggaaatcgaaaatctg
acacaaaacgtcctaaatgcacacagacaaacatgtcagtttcgattcgaagacttacag
ctactgaggtgggagacgttcacccgtaacgaagtttacagctaccaaagaaagtccatg
gaggagatgtgggagcgatgtgcctggcgaattactgatgctatccagtacattgtagaa
tttgccaaaaagatggatggcttcatgcagctgtctcagaatgatcagattgtgttactg
aaagcgggagccatggaagtacttctggtgagaatgtgtcgagccttcaactaccagaac
aatactgtcttctttgagggaaaatatgccgggccagaactcttcaaatcactgggatgt
ggtgagctaatcaacaacttcttcactttctcgcaaaacatgtgcacactgggattgttg
gagccggaactcgccctctttgctgcattggtgcttgttgactctagtcgaccatttctg
caagaaaaggataaggttgaacagctacagaaaaacttggaactagccttaaagaatcta
atgaggaagagccatagagaagggattctggtgaagctacctccaaaaggaaagataagg
agtttgtgcatccaccacatggagaaactgcagtatttccagcagatgtacccgatcatt
gtgcatgcagtattcccaccactgtacaaagagttattcaccatcgactactatgagcac
gagccatgccgagcagctccctcgcttcctatctcgttcagctataattcgtcagtgtga
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