Pleurodeles waltl (Iberian ribbed newt): 138267178
Help
Entry
138267178 CDS
T10800
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
138267178
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pwl01007
]
138267178
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pwl03016
]
138267178
Enzymes [BR:
pwl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
138267178
Amino acid related enzymes [BR:
pwl01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
138267178
Transfer RNA biogenesis [BR:
pwl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
138267178
Prokaryotic type
138267178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-GeneID:
138267178
NCBI-ProteinID:
XP_069072130
LinkDB
All DBs
Position
12:complement(670795367..671034749)
Genome browser
AA seq
1046 aa
AA seq
DB search
MHFSVLVRRALWVQEPLCRCISNRTKPLPAYIEHRLNTFERLREQHQVQLLGRLQESRAI
RISLPDRTEVDGRSWETTPYQVALQASRSLAESAVAARVNGTLHDLDRPLEEDSEVEFLT
FDSSDGQAIFWHSSAHILGAALEHLYDGLLCHGPNIDNGFFYDMFLNHGTILGTDLPALE
MQCKSLVKEKLPFERISVTRDDLKELFQYNKFKMRIIEEKVKTASTTVYRCGSLVDLCQG
PHVCHTGQIKAFKLVKNSASFWNGDSSQESLQRVYGISFPDGKQLKEWERMQEEASKRDH
RKIGRDQELFFFHAVSPGSCFFLPRGAQIYNTLMKFIKSEYRQRGFQEVITPNIFNSKLW
ETSGHWEHYSKNMFSFQVEDEMFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRN
EVSGALSGLTRVRRFQQDDAHIFCAMEQLEAEIAGCLEFLRAVYSVFGFTFKLFLSTRPE
EFLGQVETWDQAEKTGFKPCEAGHRMMSVTDPHRVCLWCLEYDHDPKSCSKGRATHPKVL
RERSLKFVAARRSTLHRSWSPSKGRSRDRLRGHHHSSSLKSSGHSGKKKKAARHSSTSPH
RSADATREECRCSRLLFAESTSGSALRLPEFPGAGATPAVLKEFYEAMHLIFGQSDPSAM
LSGPGGLEGSPSGSVPAASALAQRVPPDPLWDLCQCQSYHCPAPARSSTLPTMVVPTIDV
DPILIPDDPEPERRQPTPLMTSMGPSHPRLDSDPHYAGYEYEEGLEETLDPLEYQLDNPD
LDWAQELGEASGLDTFADAGMLSPPTVATAEGDSYSMVVSRAAEVLGLELPTAASGRISC
RSCFNMGLPLRSLSSHSMKPSLMSFWIDIQIKDAIGRYHQCATIQLDFQLPIRFNLSYVS
KDGSTSERPVMIHRAILGSVERMVAILAENYGGKWPLWLSPFQVMVIPVGPSVEDYAKEV
HRGVREGGFAVDIDTDSGTTLNRKIRKAQLAQYNFVLVVGEKEKANSSVNVRTRDQVQHG
EHPIQSFLTRLRELQDLRVMNAEELF
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgcacttttctgtcctggtccggagggctctctgggtccaggagccgctttgtaggtgc
atcagcaacaggactaagcctttgccagcgtatattgaacacagactaaatacctttgag
aggctgagagagcagcatcaggttcaactgctgggaaggctgcaagagagtcgggcaatt
agaatctcgttgccagacaggacagaggtggacggtcgttcctgggaaaccacaccatac
caggtcgcattacaggccagtcgttccctggccgagagtgcagtagcagcacgcgtaaat
gggacactccatgatctggaccgtccattggaggaggactccgaagtggagttcctgaca
tttgattcttccgatggacaggcgatcttttggcactctagtgctcatatcctgggagct
gctctggagcacctatacgatggcttgctgtgccatggaccgaacatagataatgggttt
ttctacgacatgttcctgaatcatggcaccatattagggactgacctccctgctctagaa
atgcaatgcaagtccctggtgaaagaaaaattgcctttcgagaggatttctgtgacacga
gatgatctgaaggagctatttcagtacaacaagtttaaaatgcgaattattgaagagaaa
gtgaagacagcgagcaccactgtctacaggtgtggatcgcttgtagacctctgccaaggc
ccccacgtatgccacacaggacaaataaaagcatttaaactggtgaagaattcagcttcc
ttttggaatggggactccagccaggaatctctgcagagagtctacggtatttccttccca
gatggcaaacagctaaaggaatgggagaggatgcaggaggaggccagtaagcgggaccat
cgcaagataggacgggatcaagaattgtttttcttccacgcagtgagtccaggcagctgt
tttttcttgccacgaggtgctcagatctacaacaccttgatgaagttcattaagagtgag
tacagacagcgtggctttcaggaggtgatcaccccaaatatatttaacagcaaactgtgg
gagacatcaggtcactgggagcattatagcaagaacatgttctccttccaggtggaggat
gagatgttcgccctgaagcccatgaactgtcccggtcactgtttgatgtttgaccatcgg
cctcggtcatggagagaattgcccctacgcctggctgattttggggttttgcaccggaac
gaggtctccggtgccctgtccggccttactcgtgtgcgccgctttcagcaggatgatgct
catatcttctgtgcaatggagcagttagaagcggagattgctggctgcttggagttcctg
cgggcggtgtactctgtcttcgggttcacatttaaactcttcctgtctacacgtccagaa
gagttccttggacaagtggagacctgggaccaagcagagaagacgggcttcaagccttgc
gaggccggtcaccgtatgatgtcggtgacggatccgcatcgggtctgtttgtggtgtctg
gagtacgaccacgacccgaagtcgtgctccaagggccgggccacccacccgaaggttttg
agggagcggtccctaaagttcgtggctgcccggcgctcaactctgcatcgttcatggtct
ccctcgaaaggaaggtctcgagaccgtttgcggggtcaccaccactcatcgtcattgaaa
tcttcgggccattcgggtaagaaaaagaaggcggcgaggcattcttcaacttccccgcat
cgctcggccgatgcgacgcgggaggagtgtcgatgctccaggcttctgttcgcggagtct
acttctgggtccgctctgcgcctccctgagtttccgggagccggggcgacacctgccgta
ctcaaggagttttatgaggccatgcacctcatatttgggcagtctgacccctctgcgatg
ctttcggggcctggaggtttggaagggagcccttcgggttccgttccggcagcttccgcc
ttggcccagagggtccctccagatccgctatgggatctgtgccaatgccagtcgtaccat
tgcccggcacctgctaggtcgtcgacgctcccgacgatggttgtgcccacaatcgacgtc
gacccaatccttatccccgacgacccagagccggaacgccgtcagccaacaccacttatg
acttcgatggggccttctcaccccaggttggattcggaccctcattacgctgggtacgaa
tacgaggaaggattggaggagacgctggaccctttagaataccagctagataaccccgat
ttggactgggcacaggaattgggtgaggctagtggtctagatacttttgcagacgctggc
atgctttctcctcctactgttgctacggcggagggagactcttattctatggtggtcagt
agggctgctgaggtccttggcctagagctgccaactgcagcctcaggacgaatctcctgt
cggagctgcttcaacatggggcttccacttcggagcctctcctcccattccatgaagccc
tcactgatgtccttctggattgacatccagattaaagacgccattggccgatatcaccag
tgtgcgacaatccagctagacttccagctgccgatcagatttaacctcagctacgtaagt
aaggatggcagcacctcggagaggccggtgatgatccaccgggcgatacttggttccgtg
gagagaatggtcgccattttagctgaaaactatggtggaaagtggccgctctggctgtct
cccttccaggtgatggtgatcccggttgggcccagcgttgaggactacgcgaaagaggtg
cacaggggcgtgcgagagggcggattcgcagtggatattgatacagactccgggacaacc
ctgaaccgcaaaatccgcaaagcgcagctggctcagtacaactttgtgctagttgtcgga
gagaaggagaaggctaacagctctgtgaacgtgcggaccagggatcaggtgcagcacggt
gagcatcccatccagagcttcttgactcgcctgagggagctgcaagacttgcgcgtcatg
aacgccgaggagctcttctga
DBGET
integrated database retrieval system
