Pleurodeles waltl (Iberian ribbed newt): 138267374
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Entry
138267374 CDS
T10800
Symbol
HCN2
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pwl04040
]
138267374 (HCN2)
Ion channels [BR:
pwl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
138267374 (HCN2)
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Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
IFT20
Motif
Other DBs
NCBI-GeneID:
138267374
NCBI-ProteinID:
XP_069072377
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All DBs
Position
12:complement(26688328..26977477)
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AA seq
901 aa
AA seq
DB search
MDGRGGSASPGSGVMKGCVAPPDPEDGPRRCSGGRRSTGGSGGALGKGSPNGECRRELGG
SDGPPRDRPKVSFSAETRSGSPPGPEEAPPAGAPFMQRQLSSMLQPGLNKFSLRMFGSQK
AVEREQERVRRAGAWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITFFKEETTTPWIIF
NVVSDTFFLMDLVLNFRTGIVFEDNTEIILDPEKIKKKYLRTWFVVDFVSSIPVDYIFLI
VEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMRI
INLIAMMLLLCHWDGCLQFLVPMLQDFPSNCWVSINNMVNDTWSELYSFALFKAMSHMLC
IGYGRQAPESMTDIWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYM
SFHKLPADFRQRIHDYYEHRYQGKMFDEDSILEELNEPLREEIVNFNCRKLVASMPLFAN
ADPNFVTAMLTKLKFEVFQPTDYIIREGTIGKKMYFIQHGVVSVMTKGNKEMKLSDGSYF
GEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKN
SILMHKVQHDLSSGVFNNQENEIIQEIVRYDREMAQHAELHQQQAGIYNPPQPPAPSAIA
TLQQAVAMSFCPQMASPLVGPMGLGSPRMVRRLQYAQGVPSPFSVSPALLQQPLQQQSLQ
HLQQLHQQQWRPQPPQQQPLPASAVSSPPSQSPLANRTFAYAPRGQSGSQVSLTQQRPSG
SPQRLAVHKSTQALHTSSLSQESRPLSASQPSLPHGHPQTPTHSPPRSTRDSTSSIAGPS
SAFRGPVPARVALSHQMSAGSVYAGAATPGGGQQDSGGDRKDSIVSAPDTDPVKSRLPSN
L
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcggggaggcagcgcttctccggggagcggagtgatgaaggggtgcgtagcc
cccccagatccggaggacggcccccggagatgcagcggggggcggcggagcaccgggggc
tccgggggggccctggggaagggcagcccgaacggggagtgccggcgggagctggggggc
tcggatggcccccccagggaccggcccaaggtgtccttctcggccgagacccgcagcggc
tcgcccccgggcccggaggaggcgcccccggccggggcccccttcatgcagcgccagctg
agctccatgctgcagcccgggctcaacaagttctcgctgcggatgttcgggagccagaag
gcggtggagcgggagcaggagcgggtgcggcgggcgggggcctggatcatccacccctac
agcgacttccggttctactgggacttcaccatgctgctcttcatggtagggaacctcatc
atcatcccggtgggcatcaccttcttcaaggaggagaccaccacgccctggatcatcttc
aacgtggtgtcggacaccttcttcctcatggacctcgtgctcaacttccgcaccgggatc
gtcttcgaggacaatacggagatcatcctggaccccgagaagatcaagaagaaatacctg
cgcacctggttcgtggtggactttgtgtcctccatcccggtggactacatcttcctgatc
gtggagaagggcatcgactccgaggtgtacaagacggcccgcgcgctgcgcatcgtgcgc
ttcaccaagatcctcagcctcctgcggctgctcaggctctcgcgcctcattcgctacatc
caccaatgggaagagatatttcacatgacctatgacctggccagcgccgtgatgcggatc
atcaacctgatcgccatgatgcttcttctgtgccactgggacggctgtctgcagttcctg
gtgcccatgctgcaggacttccccagcaactgctgggtgtccatcaacaacatggtgaac
gacacgtggagcgagctgtactccttcgcgctcttcaaggccatgagccacatgctgtgt
atcggctacggccgccaggccccggagagcatgaccgacatctggctgacgatgctgagc
atgatcgtgggcgccacctgctacgccatgttcatcgggcacgccacagcgctcatccag
tccctggactcctcgaggcgccagtaccaggagaagtacaaacaagtggagcagtacatg
tccttccacaagctgcccgctgacttccgccagagaatccacgactactacgagcaccgg
taccagggcaagatgtttgatgaggacagcatcctggaggagctgaacgagcccctcagg
gaggaaattgtaaactttaactgcaggaagctggtggcctcaatgccgctctttgccaac
gcagaccccaacttcgttactgccatgctgaccaagctgaagtttgaggtgttccagccc
acggactacatcatccgcgagggcacaatcggcaagaagatgtatttcattcagcacggg
gtggtcagcgtcatgactaagggcaacaaggagatgaagctctccgatggatcctacttt
ggagagatctgcctgttgacaagggggcgccggactgccagtgtgagagccgacacctac
tgccgcctctactccctctccgtggacaacttcaacgaggtgctggaggagtaccccatg
atgagacgggcgttcgaaactgtggccattgacagactggaccggatcggtaagaagaac
tctattctgatgcacaaagtccagcacgacctgagctcgggggtcttcaacaaccaggag
aacgagatcatccaggagatcgtccgctacgaccgggagatggcgcagcacgccgagctg
caccagcagcaggctggcatctacaaccccccgcagcccccggcgccctccgccatcgcc
accctgcagcaggcggtggccatgagcttctgcccgcagatggccagtcccctggtgggc
cccatgggcctggggtccccgcggatggtgaggcggctgcagtacgcacagggggtgccc
agccccttctcggtctccccagccctgctccagcagcccctgcagcagcagtccctgcag
cacctgcagcagctgcaccagcagcagtggcgcccccagcccccccagcagcagcccctg
ccggcctccgcggtgtccagtcctccttcccaaagccctctggccaaccggaccttcgcc
tacgcccccaggggccagtcgggctcgcaggtgtcgctgacccagcagaggccctcgggc
tccccgcagaggctggcggtgcacaagagcacacaagccttgcacaccagcagcctgagc
caggagtcgcggcccctgtctgcctcccagccctccctgccacacggacacccccagacc
cccacccacagccccccacggtccaccagagactccaccagctccattgcgggcccgtcc
tctgccttcaggggcccagtcccggcccgagtggccctctcccatcagatgtcggcgggc
tctgtctatgcaggagcggccacccctggaggggggcagcaggactctgggggcgaccgg
aaagattccattgtgagcgcccccgacacggacccggtgaaatccagactgccttccaac
ttgtga
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