Pleurodeles waltl (Iberian ribbed newt): 138267446
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Entry
138267446 CDS
T10800
Symbol
RFX2
Name
(RefSeq) DNA-binding protein RFX2 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138267446 (RFX2)
Transcription factors [BR:
pwl03000
]
Eukaryotic type
Other basic domains
RF-X
138267446 (RFX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Pox_D5
ThermoDBP-RP_arch
Motif
Other DBs
NCBI-GeneID:
138267446
NCBI-ProteinID:
XP_069072489
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All DBs
Position
12:85890208..86053931
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AA seq
731 aa
AA seq
DB search
MLAELSDLRMQNSEGGSDSGTSVVMRTSSVQAPVVQPVPASQQRVLVQVTGSAPKGAQVQ
QISVPRVQHVPQQVQTVQHVYPAQVQYVDGGETVYTNGAIRAAYSYNAEAQIYAPSSGAS
YFDSQGSAVTTVVSSPTSIPTHSMVGIAMDVGGSQIISSGGAYLIHGSMENTRDSLSHTS
HSSPATLQMAIENLQKNEGITSHRSSLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHC
QEHKLDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRIKPDSPLNRLQEDTQYM
AMRQQPIHQKPRYRPTQKMDGMGDYASHSSHHITPEQSVAAQSQHHQQFIDVSHVFPVFP
PLDLGNMLLPEGIVVDDIKTLQLLYRRHCEATLDVVINLQFQYIEKLWQAFWSAKTSTDG
STHLSPSEEDHEGAMPKDKLIILCKYDPVMKWMRSCDHILYQALVEILVPDVLRPVPSTL
TQAIRNFAKSLEGWLTNAMSDFPQQIIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQN
TSQINQMLSDLNRVDFANVQEQASWVCQCEEGMVQKLEQDFKLALQQQSSLDQWANWLDN
VVTLVLKPHEGSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMF
YLVEHRVAQATGETPIAVMGEFSDLASLSPTLMDKDEMSDLGSDTDMESQMASETPVKRE
RPDLNHTLQEI
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgttggcagaactctcagatttgaggatgcagaattctgagggcggatcagattcaggg
acatctgttgtgatgcgcacatcttcagtccaagcaccagttgtccagcctgttccagca
tcccaacagagggttttggtccaggtaactggctctgctcccaaaggagcccaagtgcag
cagatctctgtccccagagttcagcacgtaccacagcaggtccaaacagtgcagcatgta
tatcccgcacaagtgcagtatgtggatggaggagagaccgtatacaccaacggagcaata
cgggctgcctattcatacaatgcagaagctcagatttatgccccaagtagtggtgcttcc
tacttcgactcccagggtagtgcggtgaccactgtggtatccagtccaacatcaattccc
acacacagtatggtgggtatagccatggatgttggtggaagccagatcatttctagtggc
ggggcgtacctcattcatggctcaatggagaacactcgagattctctatctcacacctct
cattcatctcctgcaacgcttcaaatggcaattgaaaacctccaaaaaaatgaaggcata
acctctcacagaagtagcttgctcaacagccatctccagtggctgttggataattatgag
acagctgaaggtgtcagccttcccaggagttcactatacaaccattatctgcggcactgt
caggaacataagttggacccagtgaatgcagcgtcttttggcaaactaatacgctcggtt
ttcatgggcttgagaacgcggaggctgggaaccaggggcaactccaaataccattactat
ggaattcggataaagccagactctccgttgaacagactgcaggaagatacacagtacatg
gcaatgaggcaacaacctattcaccaaaaaccaagatatcgaccaacacagaaaatggat
ggcatgggagactatgcatcccacagtagtcatcacataacaccagagcaatctgtggca
gctcagagccagcatcaccagcagtttatagatgtgtcccatgtctttcctgtttttcca
cctcttgatttgggaaacatgcttttacctgagggaattgttgtagacgacatcaagacg
ttgcagcttctctaccggcggcactgtgaggctactctagatgtcgtaataaaccttcaa
ttccagtatattgagaagctatggcaggctttctggagcgccaagacgtctactgatggt
tctacgcacctgtcacccagtgaagaggatcatgaaggtgccatgccaaaagacaaatta
atcattctttgcaagtatgatcccgttatgaagtggatgcgaagctgtgaccatatttta
taccaggcattggtggaaatccttgtacctgatgtcctcaggcctgtgcctagcaccttg
acacaagctatccgaaactttgcaaagagtttggaagggtggctgaccaatgcaatgagt
gactttccccagcagattattcagacaaaggttggggtagtaagtgcctttgctcagaca
ttacgaagatatacatccctaaatcacctagcgcaggcagcacgggctgtgctccaaaat
acctctcagatcaaccagatgctcagtgatctcaaccgagtggactttgccaatgttcag
gaacaggcatcttgggtctgtcaatgtgaagagggtatggtacaaaagcttgaacaagac
ttcaaactggcgctacagcaacaaagctctctagatcagtgggccaactggctcgacaat
gtggtgaccttggtcctcaaaccccatgaaggcagccccagctttcccaaagcagctaga
caatttttacttaagtggtccttttacagttccatggtcatccgtgacctgacactgcgc
agtgcggcaagctttggctccttccacctcatccgcctactctacgatgagtacatgttc
tatcttgtggagcatcgcgtggcccaagccaccggagagacgccaattgctgtaatggga
gagttcagcgaccttgcttccttgtctcccacgctaatggataaagatgaaatgagtgat
ctgggaagtgacacagatatggagtcccaaatggcgagtgagacacctgtgaagcgagaa
cgccctgatttgaaccatactctgcaggaaatctag
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