KEGG   Pleurodeles waltl (Iberian ribbed newt): 138267460
Entry
138267460         CDS       T10800                                 
Symbol
WDR18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
pwl  Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:pwl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pwl03009]
    138267460 (WDR18)
Ribosome biogenesis [BR:pwl03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    138267460 (WDR18)
SSDB
Motif
Pfam: WD40 WD40_alt WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C NBCH_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_WDR75_2nd Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_IP5PC_F Beta-prop_DCAF12 Beta-prop_Nup120_160 Beta-prop_EIPR1
Other DBs
NCBI-GeneID: 138267460
NCBI-ProteinID: XP_069072506
LinkDB
Position
12:complement(22038716..22198581)
AA seq 432 aa
MPAPPGPELALSSDSGLPLSACAAWELQSGSALGSFRGAGSGPRALALLGGEHLLGAQPG
KSCINVWELRRPDQLQQKIICPGPVNCLAASPNGLYLAAGMAESIYLWEVSSGALLAILS
RHYQDLTCLCFTDDSSHFLSGAKDSLALVWSLYSVLNTEQSQLAEPLHVWSRHTLPITDL
HCGAGGALARAATSSLDQTAKLWSISSGDLLMSILFDVRVMAVTLDPTEYHMFCGGSDGS
IFQVDLCARPVQRDRAFQTEKESSRMFRGHRNQVTCLSVSMDGQLLLSGSHDETVRLWDI
QSKQCLRTVAHKGPVTNAVITPAPASMFSTDTRPSVPLPRFSKHLQGADTSDEQGGGRVT
LRLGLHQQGSAETYLQKTDRLHGLMCDPLDKSDLGDSEQLKVRVTELEDEVSTLRKINKD
LFDFSARIITKP
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgccggcacccccgggcccggagctggccctgtcctcggactccgggctcccgctctcg
gcctgcgcggcctgggagctgcagtcgggctcggccctcggctccttccgcggggcgggc
tcggggccccgggccctggcgctgctgggcggggagcacctgctgggggcgcagccgggc
aagagctgcatcaacgtgtgggagctgcggcgcccggaccagctgcagcagaagatcatc
tgcccagggcccgtgaactgcctagcagcgtctccgaatggcctctacctggcagcagga
atggctgagagcatctacttgtgggaggtctcttccggagcgctcctggccattctgagc
agacactaccaggacctcacttgcctctgtttcactgatgacagcagccacttcttgtct
ggggccaaagacagcctggcactagtctggagcctctacagtgtcctgaatactgagcag
tctcagcttgcagagccacttcatgtctggtcccggcacacccttcccatcacagacctg
cactgtggtgctggcggagccctggcgagagcagccacatcgtccctcgatcagacagcc
aagctttggtccatctcctccggggacctcttgatgtccattttgtttgacgtgagggtc
atggcagtgaccctggaccctacggagtaccacatgttctgtgggggcagcgatggctcc
atattccaggttgatctctgtgctcggccggtgcagcgggaccgagccttccagactgag
aaggagagcagcaggatgttcagagggcacaggaaccaggtgacgtgcctgtccgtgtcc
atggatggtcagctgctactgtccgggtctcacgatgagacagtccggctgtgggacatc
cagagcaagcagtgtctccggactgtggcgcacaaaggtcctgtgacgaatgcggtcatc
acccctgctccggccagcatgttcagcacggacactcggcccagtgtccccctcccccgc
ttcagcaagcacctgcagggggcagataccagcgacgagcaggggggcggccgagtgacc
ctacgactgggcctgcaccagcagggttcggcagagacttacctgcagaaaacagaccga
ctgcatggcctgatgtgtgaccccctggataagagtgacctaggtgactcggagcagctg
aaggttcgagtgaccgagcttgaggacgaggtcagcaccttaaggaagattaacaaagac
ctgtttgatttctccgcccggattatcaccaagccttaa

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