Pleurodeles waltl (Iberian ribbed newt): 138267494
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Entry
138267494 CDS
T10800
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138267494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwl03021
]
138267494
03036 Chromosome and associated proteins [BR:
pwl03036
]
138267494
Transcription machinery [BR:
pwl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138267494
Coactivators
SAGA/TFTC/STAGA complex
138267494
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
138267494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
138267494
NCBI-ProteinID:
XP_069072588
LinkDB
All DBs
Position
12:335819448..337061168
Genome browser
AA seq
1079 aa
AA seq
DB search
MAGPSDPLEEMLFSEVDEKAVSDLVGSLESQLTGHGAGAAGVGTWASRGLSSAQQQHRIG
GSVLSLRGATGSNGKSQLLPTVSAQPVAGAHVNSPGSQQQALHVTTSMAPHASVSLMSPS
VPTTALRSSKSPAATLPPVSPSASAIKTSSAPLGSLATPTMSSTPPAASTHFHQPTQHGS
ALHTYPAGAVNSASSNSLNMTIHCSPKTAPPAAHQSPLQANLMYGANQSSVHFQSPQAHI
AAITQNGHCSSVDPVFMQNVDCARRSYAPTSVTHVVNHENLSITHCKLDSQKQPKTSIVQ
LPPAAGASVCKPSTSLPMMMPPTSLTHNTLCSASIVSNNDTLRNTIAPSLHGLGVPASTA
GGMQQNTVAHVMCSPSLSPSLRHAMATPQRIVAPPLIVRPPQQSTIQLPPGFTIPPGMVL
IRTDSGQLVLLPQQALAQAQVQAHVPGPSPRSIPPMLPVTSSCQSYPLSASQQAVHVATS
TVHQVPPIQAKGVQSAVRPACTSAITLQASPVFSHSQVSMTTTGGQNVFRGAAAGGKPGP
QQPTVITGGLTPVSSPKQPTGLPSFPPPPHATAQIPLQPQVIPGSPVPGTTLIVQEVHEN
VKKCKNFLATLIKLASHNSPSPETSRNVKSLVQDLLDAKIDAEEFTSRLQLELKSSPQPY
LVPFLKKSLPALRQSLLNSQQSVVQAQQSQQSMQQAKSLQALPQSNSRQVSTVGMNQTIG
FNHTNNVCTFTGSNTGQLSQVNKAQASHNSEKICHSSQFLSHPPTSSQSTQSRMPLLSQD
SRPQGTAGKTPTIHASRSPGGFCVQVSANQKNKLNDPGGGSFRDDDINDVTSMAGVNLNE
ESARILATNCGLVGTQTHSCKEEHFLAAVPLHERIIKMAKRFGVTDVPTEVVTFISVATQ
LRLRAVVERVTVITRHRMESYKECGWYNPVTDVRSQLKFFEQLERLEKQRKDEEEREVLL
KAAKSRSKQEDPEQARLKQKAKEMQQLELEQIRQRDANRTALDAIGPRRKRRLDSHGPVA
ASAECVGVSSGNRAISGIHSSRHHGRHRIMRVNLRDFIFCLEQERETSRSLLLYRALLK
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcccctctgatcccctggaggagatgctcttctccgaggtggacgaaaaagcc
gtcagcgacttagtgggttctctcgaatcgcagctgaccgggcatggggctggtgcagcg
ggggttggcacttgggcgtctcgggggctgagcagtgctcagcagcagcacagaattggt
ggctcagtgcttagtctacgaggagctactgggagcaacggcaagagccagcttctccct
actgtcagtgctcagcctgttgcaggtgcgcatgtaaacagtccgggcagtcagcaacag
gcacttcatgtcacaacatcgatggctccccatgcaagtgtatcactaatgagcccctct
gtcccaaccacagcgctaagaagttccaaatcaccagcagccactttgccaccggtgagc
ccttctgcctcagctattaagacaagctctgcacccttaggttctctagctacacctacg
atgagctccacgccgcctgctgctagtactcacttccatcagcctactcagcacggctcc
gctttgcatacgtatcctgcaggggcagtcaacagtgcaagcagcaacagtttaaacatg
actattcattgcagtcccaaaacggcgcctcctgccgcccatcaaagtccgcttcaagcc
aacttgatgtatggtgccaaccagtcctctgtccattttcagagcccccaagctcacata
gcagccattacacaaaacgggcattgtagctcggttgaccctgtgtttatgcaaaatgta
gactgtgcaaggcgctcttacgcaccaacgtcagtaacacacgttgtcaaccacgagaac
ctatctataactcactgtaaactagactctcaaaagcagcctaaaacatcaatagtgcaa
cttccccctgcagcaggagcttcagtttgcaaaccctcaacgtctcttccaatgatgatg
cctcccactagcctaacgcacaatactctgtgttctgcctccatagtgtccaacaacgac
actcttcgcaatactattgcaccgtccctgcatgggttgggtgttccagcctctactgct
ggtggcatgcaacagaacacagttgcacatgtcatgtgcagcccatcattgtcgccatca
ctgaggcatgcgatggcgactcctcagagaatagttgccccaccgcttattgtgcggcct
cctcaacaaagcacaatccagttgcctccaggttttactataccacctgggatggtcctc
attagaacagatagtgggcaacttgttttattacctcaacaagctctggcccaggctcaa
gtgcaggcacatgtgccgggtcctagccctagaagcatacctccaatgcttcctgtgaca
agcagctgtcaatcgtatcctctgtcagcatcacagcaagctgtacatgtagcaacatca
acagttcatcaggtccctccaatacaagccaaaggtgttcagtctgctgtcagaccagcc
tgcacttcagctattacgttacaggcaagccctgtgttcagtcactcccaagtatccatg
acaaccactggtggccagaatgtgtttagaggagctgcagcaggaggaaaacctggacct
caacagcctacagtgattacaggagggctaactccagtctcaagcccaaaacagcccaca
ggtctgcctagctttccacctccacctcatgctactgctcagataccactgcaaccacag
gtcatccccggttcacctgttcctggaactacactaatagtgcaggaagtgcatgaaaat
gtgaagaaatgcaaaaatttcttagccactctcataaaactggcatctcataattcccct
tcgccagaaacttcgagaaatgtgaagagccttgtccaggatttgttggacgcaaagatt
gacgcagaagaattcacaagtcgtctgcagttggagctgaagtcttcaccccagccgtat
ttagttccatttcttaagaaaagcctgccagcattgaggcaatctttactgaacagccaa
cagtccgttgtgcaagcgcagcaatctcagcagtcaatgcagcaagccaaatctttacaa
gcacttcctcagtcgaactctagacaggtgtctacagttggtatgaatcaaacaatagga
ttcaaccacactaacaacgtttgcacttttacgggatcaaacaccggtcagctttctcag
gtcaataaagcccaagcaagccacaattccgaaaagatttgtcattcatctcagtttttg
agccacccaccaacatcgtcccagtcaacacagagtagaatgccacttttatctcaggac
agtagacctcaaggcacagccgggaagacaccaacaatacatgccagcaggagtcctggg
ggcttttgtgttcaggtctctgcaaatcagaaaaacaagctgaatgaccctggaggtggt
tctttcagagatgatgatatcaatgatgttacatcaatggctggagtaaatctaaatgaa
gaaagtgctcgaatcttggcaacaaactgtggtttagttgggactcaaacacattcctgc
aaagaggagcatttccttgctgctgttccattacatgagcggatcattaaaatggctaaa
aggtttggtgtgacggatgtaccaactgaggtggtcacctttatttcggtcgcaacacag
ctccgattgcgagcagtagtcgaaagagtgactgtgataacaaggcatcggatggaatcc
tacaaggaatgtggctggtataatccagttacagatgtccggtcgcagttaaagttcttt
gagcagctggaaagactggaaaaacaaaggaaagatgaagaggaacgggaggttttattg
aaggctgcaaagagtcgctcaaagcaagaagatccagagcaagcgagattgaaacagaaa
gcaaaggagatgcaacaattagaactggaacagataagacagagagatgcaaatcgaact
gcattggatgcaattggcccccgaaggaagcgaagactagattcacatggacctgttgct
gcttctgctgagtgcgttggtgtttccagtggaaatcgagctatttctggtatacattca
tctagacatcatggaagacatcgaatcatgcgtgtgaacctcagggacttcattttctgt
ttggaacaggaaagagaaactagccgatcattactgctatacagagctttactaaaataa
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