Pleurodeles waltl (Iberian ribbed newt): 138267551
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Entry
138267551 CDS
T10800
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03040
Spliceosome
Brite
Enzymes [BR:
pwl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138267551 (DHX38)
Spliceosome [BR:
pwl03041
]
Complex C
Other components
Step II factors
138267551 (DHX38)
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Other DBs
NCBI-GeneID:
138267551
NCBI-ProteinID:
XP_069072698
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Position
12:complement(233824829..234826543)
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AA seq
1252 aa
AA seq
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MEEDTSLHRLEGINAEEQIGGLVIKKKCASVEQHVFKTPAPRTSLLGLDILAAQKRKERE
QREEEAQEDKKKSKVSSFKDWDEGKEDQGTDEDTMDKANRSSKKDRHYRSVRVETPTYTG
GVNEEFLERSRQRERERREHGVYASSKEEKERKKDRNRDRDSDRRRDREERDRGRHSGSS
RYDREGNSERSSERNSERSSERGSERSSRRNEPESPRHRPKDAPTPSRSSWEEEDSGYGS
SRRSQWESPSPTPPNRDSDRNHRGSSMRDSERRDRESSRSVKNRYNDETPLPTPSYKYND
WADDRRHLGSTPRLSRGKGKRENGEDGINFENEDERQQWEDDQRQADRDWYMMDEGHDEF
HNPLAYSSEEYVKKREQHLQKQTQKRISAQRRQINEDNERWETNRMLTSGVVHRLEVDED
FEEDNAAKVHLLVHNLVPPFLDGRIVFTKQPEPIVPVKDPTSDLAIIARKGSQLVRKHRE
QKERKKAQHKHWELAGTKLGDIMGIKKEEEADTKPQTEDGTVDYRTEQKFADHMKEKSEA
SSEFSKKKSLLEQRQYLPIFAIQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHKDGYT
DYGMIGCTQPRRVAAMSVAKRVSEEMDVNLGEEVGYAIRFEDCTSEKTVIKYMTDGILLR
ESLREADLDHYSAVIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASF
FGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQIHLSGAPGDLLIFMPGQEDIEV
SSDQIVERLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVD
GIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAFK
NELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGAMDN
TGSLTATGRLMVEFPLDPALSKMLIVSCDMGCSSEILIIVSMLSVPAIFYRPKGREEESD
QIREKFAIPESDHLTYLNVYLQWKNNNYSTIWCNEHFIHAKAMRKVREVRAQLKDIMVQQ
RMSLSSCGTDWDIIRKCISAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPD
YIVYHELVMTTKEYMQCVTSVDGEWLAELGPMFYSIKHAGKSRQENRRRAKEDVSAMEEE
MALAEEQLRARKEEQEKKNILGSTRAVKIYTPGRKEQGEPMTPRRTPARFGL
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggatacctctctgcatcgccttgaaggcattaatgcagaagagcagatcgga
ggtctggtcatcaaaaagaaatgtgcatctgttgagcagcatgtgtttaaaactcctgct
cctcggacttccctactaggtttggatattctggcagctcaaaagcggaaggagcgtgag
caaagggaagaagaggcacaggaagacaaaaaaaagtcgaaggtgtcctctttcaaagac
tgggatgaagggaaagaggatcagggcacagatgaagacactatggacaaggccaacaga
agtagcaaaaaagatagacattatcgctctgttagagtggagacgccaacatatactggt
ggggttaatgaagaattcttagaacggagtcgacagcgggagcgtgaacggcgtgagcat
ggagtatacgcttcctctaaagaagaaaaggaacggaaaaaggatcggaatcgagaccga
gactctgataggagaagagaccgagaagaacgagacaggggtaggcatagtggaagcagt
agatacgacagagaaggcaattccgagaggagcagcgagaggaacagcgagcggagcagc
gaacgaggtagtgagcggagcagccgaaggaatgagccagaaagccctcggcacagaccc
aaagatgcaccaactccatcacgttctagctgggaagaggaggacagtggctatggaagc
tctagacgctcccagtgggagtctccttcgcccactcctcctaatcgagactcggatcgc
aaccatagagggtcttctatgcgtgacagtgaacggagggatagagaaagttccaggtct
gtaaagaatcggtataatgatgaaactccactacccacaccatcttataaatataacgac
tgggcagatgaccggcggcatctaggaagcacacctcgattgtccagaggaaaaggcaaa
cgagagaatggagaagatggaattaattttgaaaatgaggatgaacgtcagcaatgggag
gatgaccagaggcaagctgacagggattggtacatgatggatgagggccatgacgagttc
cacaaccctctagcatactcttcggaggagtatgtgaaaaagcgggagcagcacttgcag
aaacagacacagaaacgcatctctgcacagagacgtcaaattaatgaggataacgagcgc
tgggagaccaatcgaatgttgaccagtggagtggtccatcggctggaggtggatgaggac
tttgaagaagataatgcagccaaagttcaccttcttgtgcataaccttgttcctcctttc
ttggatgggcgcattgttttcaccaagcagccagaaccaattgttcccgtgaaggacccc
acttcagatttggcaataattgcccgcaaaggcagccagttggtacgaaaacacagagag
cagaaggaacgcaagaaggcacaacacaagcactgggagcttgcaggcactaaacttgga
gacataatgggcatcaagaaagaagaggaggcagatacaaagccccagacagaagatgga
actgtggattacaggacggagcagaaatttgctgatcacatgaaggagaagagtgaagcc
agtagtgagttctccaaaaagaagtctctgctggagcagagacagtatttacctatcttt
gccatccaacaggagctcctaaccatcatcagggacaacagcattgtcattgtggtgggt
gaaactggcagtggaaagaccacccagctgacccagtatctgcataaggatggttacaca
gactatggaatgattggatgcacccagccccgtcgagtggctgctatgtctgtagccaaa
cgagtcagtgaagagatggatgtcaaccttggtgaggaggttggctatgccatccggttt
gaagactgtacgtctgagaagactgtgataaagtacatgacggatggtatactgctacga
gaatctctgcgggaagctgacctagatcattacagtgctgttataatggatgaagctcat
gagcgatcccttaatacagatgtgctctttggtcttttgagggaggttgtagcccgacgc
tcagacctaaaattgatagtgacgtcagccacaatggatgcagagaagtttgcttctttc
tttggaaatgttcccatatttcacatccctggacgcacttttcctgtcgatattctcttt
agcaagacccctcaggaggactatgtagaagcagcagtcaagcaagccttacagattcac
ctgtctggtgcacctggtgatctcctcattttcatgcctggacaagaagatattgaggtg
tcttctgatcagattgtggaacgattggaagaactggagaacgctcctgcgctggctgtg
ctccccatctattcccaacttccatctgacctccaggccaagattttccagaaagctcca
gatggtgttaggaagtgcattgttgccactaacattgcagagacgtcattgacagtggat
gggatcatgtttgttattgattctggttactgcaagttaaaggttttcaaccctagaata
ggcatggatgccctccagatctaccccattagtcaagccaatgccaaccaacgatcagga
cgtgctggaaggacaggaccaggacagtgctttaggctgtacacacagagtgccttcaag
aatgagctgctaaccaccaccgttccagaaatccaacgcaccaacctagccaatgtagtg
ctgctgctcaaatcccttggtgtccaggatttattgcagttccatttcatggacccgcca
cccgaggacaacatgctgaattccatgtatcagctgtggatcctgggagcaatggacaat
acagggagcctaactgcaactgggcggctgatggtggagtttcccttggatccagccctt
tccaaaatgctgattgtgtcatgtgacatgggctgcagctctgagattctcattattgtt
tccatgctttctgtgcctgccatcttctacagacctaagggccgtgaggaagaaagtgat
cagatcagggagaagtttgctattcctgagagcgatcacctgacctatctgaatgtgtat
ctacagtggaagaacaacaactattcaaccatctggtgcaatgagcatttcattcatgcg
aaagccatgaggaaggtgagggaagttcgtgcccaactcaaggacatcatggtgcagcag
aggatgagtctgtcatcatgcggtacagactgggatatcatcaggaagtgcatcagtgct
gcctactttcaccaggctgctaaattgaagggtatcggagaatatgtaaatatccgcact
ggcatgccctgtcacctgcatcctacaagctcgttgtttggcatgggctacaccccagac
tacattgtgtaccatgaactggttatgaccactaaggaatacatgcagtgtgtaacctct
gtagatggtgaatggttggctgagctggggcccatgttctacagtatcaaacatgctggc
aaatcacgccaggaaaaccggcgacgtgctaaagaggatgtgtctgccatggaggaagaa
atggcattagctgaagagcagcttcgagctcgcaaggaagagcaggagaaaaagaacatc
cttggcagtacaagggcagtgaagatctacacccctgggcgcaaggaacaaggggagccc
atgacaccacgtcggactcctgcccggtttggtctgtaa
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