Pleurodeles waltl (Iberian ribbed newt): 138267576
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Entry
138267576 CDS
T10800
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04144
Endocytosis
Brite
Membrane trafficking [BR:
pwl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
138267576 (VPS35)
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NCBI-GeneID:
138267576
NCBI-ProteinID:
XP_069072733
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Position
12:365068516..365430292
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVSDLYELVQYAGNIIPRLYLLITVGVVYVK
SFSQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQTDEEVTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDKEKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSSALEHNTEIVSQEQVDAIMNLVSTLIQDQPDQPAEDPD
PEDFCDEQSLVGRFIHLLHSDDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYRLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMAQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSTCAHLFWSGRNTDKNGEEIHSGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTVQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRMR
REAPESDGPIYEGLVV
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccgactacacagcagtctcctcaggatgagcaggagaagctcctcgacgaggctgtt
caagccgtgaaggttcagtcatttcagatgaagcgatgcttggacaaaaataaactaatg
gatgctttaaaacatgcttccaatatgcttggcgaactgcggacctccatgctgtctcca
aagagttactatgagctctacatggccatttcagatgagttgcactacctggaagtctac
ttgactgatgagtttgccaaggggaggaaagtatctgatctatacgagcttgtgcagtat
gctggaaatatcatcccacgactctacctcttaattactgtgggtgtggtctatgtcaaa
tcattttcccagtcgcggaaagatattttgaaagacctggtagaaatgtgtcgtggggtt
caacatcccttacgaggtctctttctccgaaactaccttcttcagtgtacgcggaatatc
ctaccggatgaaggcgagcagactgatgaggaagttactggagacataagtgattccatg
gatttcgtgctgctgaactttgcagaaatgaacaagttatgggtgaggatgcagcaccag
gggcacagtcgggacaaggaaaaaagagagcgggagagacaggagcttcgaattctagta
ggaacaaatttagtacgtctcagccagctggaaggtgtaaatgtggaacgctacaaacag
attgtgttgcctggtatacttgaacaggttgtaaattgcagggatgcattggcccaggag
tatctcatggagtgcattatacaggtttttccagatgaatttcaccttcagaccctaaac
ccattccttcgggcctgtgcagaactgcaccaaaatgtaaatgtgaaaaacattatcatt
gccttaattgatagactagctttatttgcccatcgggaagatggcccaggaataccagct
gacatcaaactgtttgacattttctcacagcaggtggctacagtaatacagtctaggcaa
gatatgccttcagaagatgtagtgtcattacaagtgtcgctgattaatttagccatgaag
tgctatccagatcgtgttgactatgtggacaaagttctagagagcacagtggaaatcttt
aataaactcaacctggaacatattgccactagcagtgctgtttcaaaagaactcaccaga
cttttaaaaatcccagttgatacttacaacaatatcctgacagttctgaagctgaaacat
ttccacccgctcttcgaatactttgactacgagtcacgaaaaagcatgagttgctacgtc
ctcagcagtgcactggaacataacacagagattgtctctcaggaacaggttgatgccatt
atgaacctggtatcgacgctgatccaggaccaaccagatcagcctgccgaggaccctgat
cctgaagacttttgtgatgaacagagtctggttggacggttcattcacctcctgcactcc
gatgacccggatcagcagtatttgatcctgaacacagctcggaaacattttggggcaggt
ggtaaccagaggattcggtacactttacccccattggtttttgcagcataccgacttgct
ttccgatacaaggaaaattccaaagtggacgacaaatgggagaagaaatgccagaagata
ttttcgtttgcccatcagaccatcagcgctttaattaaagccgagctggcagaattgccc
ttgaggctgtttcttcaaggtgccctggcggcgggagaaattggatttgagaaccatgaa
accgtagcatacgagttcatggcccaggccttctctctgtatgaagacgagatcagcgac
tccaaggcgcagctggccgccatcacgctgatcattggcacgttcgagaggatgaagtgc
ttcagtgaggagaaccacgagccgctgcgtacacagtgcgcactggcggcctcaaagctc
ctcaagaagcccgaccagtgccgcgccgtgagtacctgcgcccacctcttctggtccggc
cggaacacggacaaaaacggggaggagatccacagcggcaaaagagtgatggaatgcttg
aagaaagctttaaaaatagcaaatcagtgcatggatccatccttgcaagttcagcttttc
atagaaatcttgaacagatacatctacttttatgaaaaagaaaatgatgcagtgactgtc
caggttttgaatcagctcattcagaagatcagagaagatctgcccaacctggaatccagc
gaagaaactgaacaaataaacaaacattttcataacacattggagcatttgcgtatgcgg
cgggaagccccagaatccgatggtccaatatacgaaggacttgttgtttga
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