Pleurodeles waltl (Iberian ribbed newt): 138267581
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Entry
138267581 CDS
T10800
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03018
RNA degradation
pwl03040
Spliceosome
Brite
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138267581 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
138267581 (LSM4)
Spliceosome [BR:
pwl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
138267581 (LSM4)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
138267581
NCBI-ProteinID:
XP_069072737
UniProt:
A0AAV7L7X1
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Position
12:complement(52419708..52439229)
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AA seq
141 aa
AA seq
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MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVLSKGRGRGSGGMQQQQKQQKGRGVGGAGRGVFGGRGR
GAPGGGRGQQEKKPGRQSGKQ
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctttatcattactgaagactgctcagaaccaccctatgttggtggaattgaaa
aatggagaaacgtataatggtcatctagtgagttgtgataactggatgaacatcaatctc
cgagaagtgatctgtacctccagggatggcgacaaattctggaggatgcccgaatgctac
attcgaggtagcacgattaagtacctgcgaatcccagatgaaattattgacatggtgaaa
gaggaagtactctccaagggccggggccgtggtagcggtggaatgcaacagcaacagaag
cagcaaaaagggaggggagttggaggcgctggtcgaggtgtgttcggaggacgtgggaga
ggtgccccaggtggtggcagaggacagcaggagaagaaaccaggcagacaatctgggaag
cagtga
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integrated database retrieval system
