Pleurodeles waltl (Iberian ribbed newt): 138268034
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Entry
138268034 CDS
T10800
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pwl04812
]
138268034 (KATNB1)
Cytoskeleton proteins [BR:
pwl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
138268034 (KATNB1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Katanin_con80
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_VPS8
NBCH_WD40
Beta-prop_HPS5
Beta-prop_IFT140_1st
ASA1
Beta-prop_NOL10_N
PAC11
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
CFAP251_N
WD40_RFWD3
Beta-prop_Vps41
RMC1_N
Beta-prop_IFT140_2nd
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
138268034
NCBI-ProteinID:
XP_069073461
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All DBs
Position
12:513607903..514041969
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AA seq
665 aa
AA seq
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MTALKMQEFVAHKGNVSAVALGKASGRLLATAGDDFCVNVWNVNKPNCIMSLTGHTTPVE
ALRFNVSEEWLVAGSQSGSLRLWDLKAAKSVRPLPGHKANICSLDFHPFTEIVASGSVDS
GIKIWDIRRKGCIFRYKGHTQPVRCLRFSPDGKWLASCADDHTVKLWDLTVGKVLADFTE
HTGPVNIVEFHPNEFLLASGSSDRTIRYWDLEKFQIVGCTESGTNAVRSMLFDPDGGCLY
SGSQDSLRVYGWEPERCFDMVPVNWGKVADMGLCLNHLIGVSFATSVATTYKVDLNRVVK
TASARQEVAQDEQPLSHPTPKGASLRRIYERPSTSSSKPQRFKQNSDNERRSPSSEDDRD
EKESMTEIQNPEDYNEIFQPKTAISRTPPRKTDPFPAPVEDVSSCLQLINEKSGRTIESI
VKEIVKPSIPVEVLTPAPKKANPEHLQQAPIASSTPNERVPESPIISITRTEPVGLKASD
FLPPSNKNQSEVVDEDAMSQIRKGHDTMCMVLTSRARHLDSVRAVWSTGDIKTSVDSAIR
VDDLSVMVDVLNIVNQKASLWKLDLCTSVLPQIEKLLQSKYESYMQTGCASLKLILQRFL
PIITDILSAPPSVGVDISREERLEKCQQCHMQLCNISKVIKSKTVQSGRQSSAFRELQLL
MASLE
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctttgaagatgcaagagtttgttgctcataaaggcaatgtgtctgcagtggcg
ctgggtaaggcttcggggcgcctcctggccactgcaggggatgacttctgcgttaacgtg
tggaatgtcaacaagccaaactgtattatgagcctgacaggccacaccacaccagtagag
gctctacgttttaacgtttcagaagaatggctcgtagcagggtcacagtctggttctctt
cgtttgtgggatttgaaagctgccaaatctgttcgaccgttaccagggcacaaagccaat
atctgtagcctggattttcacccctttacagaaattgtagcttctggttcagtggactct
ggtattaagatctgggacatcaggagaaaaggttgcatttttcgatacaagggccacaca
caaccagtgcggtgtctccgattcagtcctgatggaaaatggttagcgtcatgtgcagat
gatcacactgtgaagctctgggacctgactgtgggcaaggttttggcagacttcacagaa
catacaggaccagttaacattgtggaatttcatccaaatgaatttcttcttgcttctggc
agctctgatagaacaattaggtactgggatcttgagaagttccagattgttggctgcaca
gaaagtgggacaaatgcagtcaggagtatgttgtttgaccctgatggtggctgcttgtat
agtggttcccaggacagtctgcgagtttatggatgggagccagaacgctgctttgacatg
gttcctgtgaattggggcaaagttgctgatatgggcttgtgcctaaatcatctgattggt
gtctcctttgccacttctgtcgccactacttataaggtggatctaaaccgggtggtaaaa
acggcatctgcccgacaagaggtggcccaggatgaacagccactttctcatcccacgccc
aagggagcctcgcttcgacgtatctatgagaggccatccacctccagcagcaagccacag
agattcaagcagaactctgacaatgagcgccgcagccccagcagtgaggatgaccgggat
gagaaggaatccatgactgaaattcagaatcccgaagactacaatgagatcttccaaccc
aaaactgctatctctcggaccccaccacgaaagactgatccatttcctgccccagtggaa
gatgtttcttcatgtttgcaactaatcaatgaaaaaagtgggcgaacaatagaatctatt
gtgaaggaaattgtgaagcccagtataccagttgaagttttgacaccggcaccaaagaag
gcaaatccagagcatctgcaacaggctcctatagcctcctcgacccctaacgaacgggtt
cctgaatctcccatcatctccatcacccggactgaacctgttgggctgaaggcttctgac
ttcctcccgccgtcaaacaaaaaccagtcagaggtggtggatgaagatgctatgtcacag
atccgcaaaggacatgatacaatgtgcatggtacttaccagcagagctcgacacctggac
tctgtgcgggccgtttggagcacaggggatatcaagacttctgtggactctgcaatcagg
gttgatgacttgtcggttatggtggatgtactgaacatagtcaatcagaaagcgtctctg
tggaaactggatctttgcacatctgttctgcctcaaattgaaaagctgctccagagtaaa
tatgaaagctacatgcagactggttgtgcatcactaaaactgatcctgcaaagatttctg
cccatcatcacggacattctatctgcaccaccctcagttggagtggatatatccagagaa
gagaggcttgagaagtgtcaacaatgccatatgcagctttgtaacatcagtaaggtgata
aaaagcaaaacagtacaaagtggccggcaaagcagcgccttccgtgagcttcagcttctc
atggcgagcctggagtga
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