Pleurodeles waltl (Iberian ribbed newt): 138268093
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Entry
138268093 CDS
T10800
Symbol
KARS1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
138268093 (KARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pwl01007
]
138268093 (KARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pwl03016
]
138268093 (KARS1)
Enzymes [BR:
pwl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
138268093 (KARS1)
Amino acid related enzymes [BR:
pwl01007
]
Aminoacyl-tRNA synthetase
Class II (A)
138268093 (KARS1)
Transfer RNA biogenesis [BR:
pwl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
138268093 (KARS1)
Prokaryotic type
Other AARSs
138268093 (KARS1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
138268093
NCBI-ProteinID:
XP_069073568
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Position
12:243669698..243761457
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AA seq
618 aa
AA seq
DB search
MVTRVACRLFRVSLHQAGWAQRGKKEDVLLCQLSTSPSLYRDKALHGKKSELKRRLKAEK
KAAEKEAKQKEQTEKHPVAAGDQPVEDGLLSEEESLDPNQYYKIRTQAIQQLKGTKEDPY
PHKFHVDLSLTEFIEKYNHLQTGEHLTDVTLNVAGRIHAKRASGMKLIFYDLRGEGVKLQ
VMANSKNYKSEEEFASINNKLRRGDILGVRGNPGKTKKGELSILPVEMTLLSPCLHMLPH
LHFGLKDKETRFRQRYLDLILNDHVRQKFIVRAKMITYLRRFMDDLGFLEIETPMMNIIP
GGAVAKPFITYHNELDMHLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEF
TTCEFYMAYADYHDLMDLTEKLLSGMVKHITGDYKIMYHPDGPEGQAFEIDFTPPFRRIS
MVEELEKALGVSLPDTEQFETEEMRKFLDDICLKKEVECPPPRTTARLLDKLVGEFLEVT
CISPTFICDHPQIMSPLAKWHRSKKGLTERFELFVMKKEVCNAYTELNDPIRQRELFEDQ
AKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGLDRLAMFLTDSNNIKEVLLFPAMKP
EDNKKEAAPDTVPEGTSV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggtgacccgggtggcctgtaggctctttagggtgtctctacaccaagctggctgggca
cagcgaggcaagaaggaggatgttctgctctgccaactttctacttccccctctctctac
agggacaaggcacttcatggtaaaaaaagcgagctcaagaggcgcttaaaagcagagaag
aaggcagcggaaaaggaagccaaacagaaggaacagacagagaagcatccagtggcagct
ggagaccaacccgttgaagatggcctgttgtctgaagaggaaagccttgaccctaatcaa
tactacaagattcgaacacaagcaatccaacagctcaagggaaccaaggaggacccatac
ccacataagtttcatgtggatctgtcactcacagagttcattgagaagtacaaccatttg
cagacgggagaacacctcactgatgtgactctcaatgttgcaggtcgaatccatgcaaaa
agagcatctggcatgaaactgatcttttatgatctacggggtgaaggagttaaactgcaa
gtgatggcaaactccaagaattacaagtcggaggaagagtttgcttcaatcaacaacaaa
cttcgtcgaggagatattttaggtgttcgaggaaacccaggaaagaccaaaaaaggtgaa
ctgagcattctgcctgttgagatgacactgctgtcaccctgtctacacatgctccctcac
ctccactttgggctgaaggacaaggaaactcgattccgtcagcgatacctggatttgatt
ctcaatgatcatgtgcgccagaagttcattgtcagagcaaaaatgatcacctacctgcgt
cgctttatggatgacctaggattcctagagattgaaacccctatgatgaacattatacct
gggggcgctgtggccaaacccttcatcacttaccacaatgaactggacatgcatctgtac
atgagaattgcacctgagctatatcacaagatgctagtagttggaggaattgacagagtg
tacgaaattggtcgtcagtttagaaatgaaggcattgacttgacacataacccggagttc
acaacttgcgagttctacatggcatatgcagattaccatgacttgatggacctcacagag
aagctgctctcaggtatggtgaaacacatcacaggtgactacaagattatgtaccaccca
gacggacctgaaggacaagcctttgagattgactttacgcctcccttccggaggatcagt
atggtagaagaattggagaaagccctgggagtatcacttccagacacggagcaatttgag
accgaagaaatgcgcaagtttttggatgatatttgtttaaagaaagaagttgagtgccct
ccaccaaggacaactgccagacttctggacaagctggttggtgagttcctggaagtaacc
tgcattagtcccaccttcatctgtgatcatcctcagatcatgagccctcttgctaaatgg
catcgttcaaagaagggactgacggagaggtttgagctttttgtaatgaagaaggaagtg
tgcaatgcttacactgagctgaatgatcccatccgacagagagagctgtttgaggatcag
gcaaaggctaaagctgctggtgatgatgaggccatgttcattgatgaaaatttctgcact
gctttggagtatgggttgccacctacggctggctggggaatgggccttgatcggcttgcc
atgttcctcacggactcgaacaatatcaaggaagtgctactgtttccagccatgaaaccg
gaagataataaaaaagaggcagcgccagacacagtccctgaaggcacctctgtatga
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