Pleurodeles waltl (Iberian ribbed newt): 138268195
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Entry
138268195 CDS
T10800
Symbol
RFWD3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138268195 (RFWD3)
Enzymes [BR:
pwl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138268195 (RFWD3)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138268195 (RFWD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
Beta-prop_THOC3
Beta-prop_WDR5
zf-C3HC4
WD40_CDC20-Fz
zf-C3HC4_2
EIF3I
Beta-prop_WDR3_1st
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
WDR55
zf-RING_5
Beta-prop_EML_2
zf-RING_11
zf-C3HC4_4
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
WD40_2
zf-RING_Vps41
Myo5a
WD40_Prp19
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
DUF7837
Beta-prop_SPT8
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
138268195
NCBI-ProteinID:
XP_069073724
LinkDB
All DBs
Position
12:complement(553925453..554190970)
Genome browser
AA seq
753 aa
AA seq
DB search
MAQEEMEVDLSPVYNSVRLDIPRTYSGHIDSASHLPSSYLDPPLPIQLSQHAHPILLEGT
RENETIDDDDVIVMDPVQVQVQPPDVRLLAAAVRQIGERRILRVRQQASERRNGQQQRTT
RSSRPLDRSQAPLDSYFQLNRPREAHVVPPAETVPILVEVPLPEDDDGSSSDATVELSDE
EEDDGDVHGAEGEVEQEASTAVPNVGAVVEVQPDVSQASSSSSAHPDTSSPPLNVQHKQR
TPLKRVDPIPTVPSVADEDEGDTCAICFESWTNAGQHRLSALRCGHLFGFTCIDRWLRGQ
AGKCPQCNKKAKRSDIVVLYARTLKAVDTSEQERMKSTLEQEQTLRRKAELESAQCRLQV
QVLTDECGRLRKQVQELRTLMAQHSSSSSQQPSSSRVGVFNSLSSSQTQSQHKYNFEKAI
LISQTGNCRVMSYSDRLSCLAVSQPSPQATLMPGCGIKKISAANMKSSQYVPIHSKQIRG
LAFSNQTDGLLLSAALDNTVKLTSLLTNTVVQTYNAGRPVWSCCWCEDDTNYIYAGLING
SVLVYDLRDTSSSVRELVPQGSRCPVVSLSYLPRMASAAFPCGGVLAGTLEGACFWEQNN
AQYRPHLLPLEAGGCTDIQTESSTRHCLVTYRPGKSHSSVRCVMMELTTSRLVGSDEDVT
CSCYPVQTFTAGPTCKLLTKNAIFESPSKDGSILVCAGDEATNSAMLWNAGSGSLVQKLQ
TDLPVLDICPFEVNQTSMLATLTEKMVKVYKWE
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggaggaaatggaagtggatcttagtccagtatataattcggttcgtttggat
attccaagaacatactctggccacattgactcagcatctcacttgccatcatcctatttg
gatcctcctttacccatacaattgagccaacatgcacaccccatcttgctcgagggtaca
agggagaacgagaccattgatgatgatgatgtaattgtgatggatcctgtccaggtacaa
gttcagcctccagatgtgcgacttttggctgcagcagtacggcagattggggagaggcgt
atcctaagggtgcgacagcaagcttcagagagaaggaatggccaacagcaaaggaccacc
agatcgagtaggcctttggacaggtcccaggcaccactggactcttatttccaacttaac
cggcccagggaggcccatgtggtgccacctgcagagactgtgcctatcctggtggaagtg
ccactcccagaggatgacgatggcagcagctcggatgctacagtggaactgtcagatgag
gaagaagatgatggtgatgtccatggtgcagagggtgaagtggagcaggaagcctcaaca
gccgtgcctaatgtgggagcagtagtggaggtgcagcctgatgtatcccaagcttcatct
tcctcctctgctcatcctgacaccagcagcccacctctcaatgtccaacataaacagcgg
actcctctgaagcgggtggaccccatccctactgtaccctcagttgcagatgaagatgaa
ggggatacctgtgccatttgctttgagagctggacaaatgcagggcagcaccgcctctca
gccctacgatgtgggcacctttttggcttcacttgtattgacaggtggttacggggacag
gcaggaaagtgtccacagtgcaacaagaaagcaaaacgttcagacatcgttgtgttgtat
gcccgaacactaaaggctgtggacaccagcgagcaggaacgtatgaaaagtactttagaa
caggagcaaactcttagacggaaagcagagttggaatccgctcagtgtcgtctacaggta
caggtcctcacagatgaatgtggtagactacgaaaacaagtacaggaacttcgaacgttg
atggcccaacatagctccagctccagccaacaacccagcagctcccgtgttggtgttttc
aactccttgtcatcgtcgcagacgcagagtcagcacaaatacaattttgagaaggctatc
ctcatttcacagactggtaactgccgtgtcatgtcatactcggaccgtctaagctgcctt
gccgtgtctcagccgtcacctcaggccacacttatgcctggctgtgggatcaagaagatt
agtgcagccaacatgaagagtagccagtacgtaccaatccactctaagcagatccgtggg
ctggcattcagcaaccaaacagacggcttgcttctctctgctgctctggacaatacagtc
aaactgaccagcttattgacaaatactgtggtacagacttataatgctggccgaccggtt
tggagctgctgctggtgcgaggacgatacaaactacatctatgcaggtctgatcaatggc
tctgtgcttgtatatgacctgagggacaccagttcgtctgtgcgtgaattagtgcctcaa
ggatccaggtgtccagttgtgtcgctgtcttacctgccacgcatggcctctgctgctttt
ccttgtggtggagtcttggctggtacacttgaaggcgcttgcttctgggagcagaataat
gctcagtatagacctcacctacttccactggaagctggagggtgtactgatatccagact
gaaagcagcacccgacactgccttgtgacctacaggccaggcaagtctcactcatctgtc
cgttgtgttatgatggagctgaccactagccgtttggtgggttcagatgaggatgtgacg
tgttcctgttacccagtgcagactttcactgctggacctacctgcaaacttctcacaaag
aatgcaatttttgagagccccagcaaggacggcagcatcctggtatgtgcaggagatgaa
gctactaattctgccatgctttggaatgctggaagtggttctctggtccagaagctgcaa
acagacctgccagtcctggacatatgtccattcgaagtgaaccagaccagtatgctggcc
acactgactgagaaaatggtgaaggtatacaaatgggaatga
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