Pleurodeles waltl (Iberian ribbed newt): 138268221
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Entry
138268221 CDS
T10800
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138268221 (CTCF)
03036 Chromosome and associated proteins [BR:
pwl03036
]
138268221 (CTCF)
Transcription factors [BR:
pwl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
138268221 (CTCF)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
138268221 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-met
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2HE
zf-C2H2_6
A24_N_bact
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
138268221
NCBI-ProteinID:
XP_069073773
LinkDB
All DBs
Position
12:complement(567204628..567577565)
Genome browser
AA seq
731 aa
AA seq
DB search
MEEEMVAAMMDESESFMKGKERKTYHRRREGGQEDEVCGMVQTQMDGNEVAHEINSNVQM
VMMEQLDPTLLQMKTEVLEGGIPQEGDPTVDDTQIITLQVVNMEEQPINLGELQLVQVPM
SMNVSDGTATVEGLHAAFEHEINKDGLQDGEPMICHTLPLPEGFQVVKVGANGEVETLEQ
TELQPQEENSWHKDPDYQPPTKKLKRMKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSDV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIELGRKCRYCDAVFHERY
ALIQHQKSHKNEKRYKCDQCEYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHSDHCTGPDGTDGENGGEEPEPMPKKGK
RGRKRKMRSRKENSSDSEENAEPELDDHEEEELLPVEIEAEPEIEPMTPLSPPTKKRRGR
PPGKSNQSKPVQPAAIIQVEDQDTGAIENIIVEVKKEPGLDPLEDARAQPSAVEVPNGEL
TPEMILSMMDR
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagatggtggcagccatgatggatgagtctgaatccttcatgaaaggcaaa
gaaagaaaaacctatcatcgacgcagggaaggggggcaagaggatgaagtatgtggcatg
gtacaaactcaaatggatggaaatgaagtggctcacgaaatcaacagcaatgttcagatg
gtaatgatggaacagctcgatcccacactacttcagatgaagactgaagtcctggaggga
ggaatcccccaggaaggtgatcccactgtggatgatactcagatcatcacattgcaggtt
gtcaatatggaagaacagcccataaaccttggagagcttcagcttgtccaagtaccgatg
tcgatgaatgtctctgatggcactgccacagtagaagggcttcatgctgcttttgaacat
gaaattaataaagacggccttcaggatggagagcctatgatctgtcataccttgccttta
ccggaaggattccaggtagtgaaggtgggtgcaaatggtgaagttgagactttagagcaa
acagaacttcagccccaggaagaaaatagctggcataaggatccagactaccaaccgcca
accaaaaaactaaagagaatgaaaaaaagcaaactccgttatacagaggaaggcaaagat
gttgatgtgtctgtgtatgactttgaagaggaacagcaggaaggtttgctttctgatgtt
aatgcagagaaagttgttggaaacatgaaaccacctaagccaacgaaaattaaaaagaaa
ggtgtaaaaaagacattccagtgtgagttgtgcagctatacttgtcccaggcggtctaac
cttgatcgacacatgaaaagccacaccgatgaaagaccgcacaaatgtcatttatgtggt
agggctttcagaacagtcacgctcctgcggaatcacttaaacacacacacaggtactcgg
ccacacaaatgcacagactgtgatatggcctttgtgaccagtggcgagctggttaggcat
cgacgttacaaacacactcacgagaagcctttcaagtgctccatgtgtgattatgcaagt
gtggaggtgagcaaattgaaacgccacatccgttctcacactggagagcgccctttccaa
tgcagcttgtgtagctatgccagcagagatacatataaactgaaacgacacatgaggacc
cactccggtgagaaaccatatgaatgttatatttgccatgcccgatttactcagagtggc
acaatgaagatgcacattttacagaagcatacagagaatgtggccaaatttcattgtccc
cactgtgacacagtgattgcaaggaaaagtgacttgggtgtccatttgagaaaacagcat
tcctacattgagctaggaagaaagtgtcgttattgtgatgctgtgttccatgagcgatat
gccctcatccaacatcagaagtctcataagaacgagaaacgctataagtgcgaccagtgt
gaatacgcatgcagacaagagcgccatatgataatgcataaacgaacacacactggagaa
aaaccatacgcctgtagccattgtgacaaaactttccggcagaagcagctgctcgatatg
cacttcaaacgctaccatgaccctaacttcgtccctgctgcttttgtgtgttcaaaatgt
ggaaaaacatttacacggaggaacaccatggccaggcattctgatcactgcactggtccg
gacgggacagatggagaaaatgggggtgaagaaccagagccaatgccaaagaaaggaaag
cgagggcggaagagaaagatgcgatcaagaaaagagaattcatctgacagtgaggaaaat
gcagagcctgaactagatgatcatgaagaggaggagctgctgccagtagaaattgaagct
gagccagagatcgagcccatgactcctttatcaccacctacaaagaaacgaagaggtcga
ccaccaggaaaatcaaatcagtccaaaccagtccaacctgcagcaatcattcaagtggaa
gaccaggacactggtgccatcgagaacattattgtagaagtaaagaaagaaccaggtctt
gaccctttggaagatgcacgagcgcagcctagtgcagttgaggttcccaatggggagctt
acgccagagatgatacttagcatgatggaccggtga
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integrated database retrieval system
