Pleurodeles waltl (Iberian ribbed newt): 138268511
Help
Entry
138268511 CDS
T10800
Symbol
VPS45
Name
(RefSeq) vacuolar protein sorting-associated protein 45 isoform X1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
138268511 (VPS45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138268511 (VPS45)
Membrane trafficking [BR:
pwl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
138268511 (VPS45)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
B12-binding
Motif
Other DBs
NCBI-GeneID:
138268511
NCBI-ProteinID:
XP_069074326
LinkDB
All DBs
Position
12:complement(646915637..647346526)
Genome browser
AA seq
570 aa
AA seq
DB search
MNVVLAVKQYVSKMIEDSGPGMKVLLMDKETTGIVSMVYTQSEILQKEVYLFERIDSMNR
DVMKHLRAICFLRPTKENVDFLIQELRRPKYCVYFIYFSNVISKSDVKSLAEADEQEVVA
EVQEFYGDYIAVNPHVFSLNILGCCQGRNWDPVQLSRTTQGLTALLLSLKKCPMIRYQLS
SDTAKRLAEGVKQVITKEYELFDFRRTEVPPLLLILDRCDDAITPLLNQWTYQAMVHELL
GINNNRIDLSRVPGINKDLREVVLSAENDEFYANNMYMNFGEIGTNIKNLMEDFQKKKPK
DQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSERHLMEVSEVEQELACQ
NDHSSALQNVRRLVQNLRVSEADAVRLVMLYALHYERHNSNNLPGLLMDLKNRGVSDRNR
KLISAVVDYGGKRARGSDLFSPKDAVAITKQFFKGLKGVENVYTQHQPLLQETLDQLIKG
RLKDNLFPYLGPSTLRDRPQDIIVFMIGGTTYEEALTVYNLNRTTPGVRIVLGGTTIHNT
KSFLEEVQASGFQSRSAENIHATARPVSRR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttgtactagcagtgaagcagtacgtatctaagatgatagaggacagcgggccg
ggcatgaaggtgcttcttatggacaaggaaacgactgggattgtcagcatggtatacacc
cagtcagagatcctgcagaaggaagtatacctctttgagcgaatcgattctatgaaccgc
gatgtcatgaaacacctcagggccatatgttttctgagacccaccaaggaaaatgtggat
ttcttgattcaagaacttcgtagacccaagtattgtgtatatttcatttatttcagtaac
gtgatcagcaagagtgatgtcaagtctctggctgaggctgatgagcaggaagtagtggcc
gaagttcaggagttttatggagattacatcgctgtgaatccacatgtgttttcgctaaac
attctgggttgctgtcagggccggaactgggatcctgtgcagctgtccagaaccacccaa
ggactgacagctttgctgttgtctttgaagaaatgtcctatgatacgctaccagttgtcc
tctgacacggctaagagacttgctgaaggagtcaagcaagtcatcacaaaggagtatgag
ctctttgacttccgaaggactgaggtgccaccactactactgatcttggatcgctgtgac
gatgccattacacctcttttaaatcagtggacataccaggcaatggtgcatgaactactg
gggataaacaacaatcgtattgacctttcccgagtacctggaatcaacaaagacctgcga
gaagttgtgctgtctgcggagaatgatgagttctatgctaacaacatgtacatgaacttc
ggagagattgggaccaacatcaaaaacctaatggaagattttcagaagaaaaaacccaag
gaccagcagaaacttgagtccattgcagacatgaaggcctttgttgagaattatcctcaa
tttaagaagatgtccggcactgtgtcaaagcatgttactgtggtgggggaactatcccga
ttggtcagtgagcggcacttgatggaggtgtctgaggtggaacaagagctggcctgccag
aacgatcattcgagtgctctccagaacgtgcgcaggctggtgcagaatctgagggtgtcg
gaggcggatgcagtacgcctggtgatgctctacgctctccactatgagaggcacaacagc
aacaacctgcctgggcttttgatggacctgaagaacaggggtgtctcggatagaaaccgc
aagttgatttctgcagtggtggactatggtgggaaacgggcacgtggcagtgacctcttc
agtcctaaggatgctgtggccatcacaaagcagttcttcaagggactcaagggagtagaa
aatgtgtacactcaacaccagcccctcctgcaagagactctggaccagcttatcaaaggg
agattgaaagataacctttttccatacctggggcccagcaccctccgagacaggccccag
gatattattgtgtttatgatcggtggaaccacctatgaggaagcgttaacagtgtataac
ctgaatcgaacaacacctggagttaggattgttctgggagggacgaccattcacaacact
aaaagttttttagaggaagttcaagcgtcggggttccagagcaggagtgctgagaacata
catgctacagctcggccagtgtccaggcggtga
DBGET
integrated database retrieval system
