KEGG   Pleurodeles waltl (Iberian ribbed newt): 138268514
Entry
138268514         CDS       T10800                                 
Symbol
SF3B4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
pwl  Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pwl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    138268514 (SF3B4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pwl03041]
    138268514 (SF3B4)
Spliceosome [BR:pwl03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    138268514 (SF3B4)
 Complex B
    138268514 (SF3B4)
 Complex C
   U2 SnRNP specific factors
    138268514 (SF3B4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 138268514
NCBI-ProteinID: XP_069074333
LinkDB
Position
12:647967204..647990426
AA seq 416 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSVPTPIVTSLGQGTVTPVGIPT
LGTFPPPVPPPGAMPPGLPPALPPMPLPQASTAPGPVTTVAPVQTHPQVPHHFQPGGIPP
PGMPPMQVQHHRPPGMQQHHPAPPGSAAQVPPRPPHGMPHPGPPPMGMPPRGPHFGTPMG
HPGMPPHGMRGPPPLMPPHAFNGPPRPPPYGYRGGPIPPPRPVQRPLVPMRGPMPQ
NT seq 1251 nt   +upstreamnt  +downstreamnt
atggcggccgggcctatttcagagcgaaatcaggatgctactgtgtacgttggtggcctc
gatgagaaagtgagtgaacctcttttatgggagctgtttcttcaagctggaccggtggtc
aacacacacatgcccaaggacagggttacaggccaacatcaaggttatggatttgtggaa
ttccttagtgaagaagatgcagactatgctattaaaattatgaacatgataaaactatat
ggcaaaccaattcgggtaaacaaggcctcagcgcacaacaagaatttggacgttggggcc
aacatcttcattggcaacctggatcctgaaatagatgagaagctgttatatgacacattc
agcgcctttggtgtcattctgcagacccccaaaatcatgagggacccggacactggcaat
tccaagggctacgccttcattaactttgcaagttttgatgcctctgatgctgccattgag
gctatgaatggacagtacctctgcaatcgtcccatcacagtgtcctacgccttcaagaag
gattccaagggagagcggcatggctctgctgcagagcgactgctggcagcacagaatccc
ctgtcacaggctgaccgtcctcatcagctgtttgcagatgcccctcctcctccctctgtg
ccaacacccattgttacatccttgggacagggtacagtcactccagtgggtattccgacc
cttggaaccttcccgccgcctgtgccgccccctggtgcaatgccccctggcctgcctcca
gcacttccaccaatgcctttgccgcaggcttccactgcacctggcccagtgaccacagtc
gctcctgtacagactcatcctcaagtcccacatcatttccagccaggagggatcccaccg
cctggtatgccaccaatgcaagttcagcatcatcgccctccggggatgcagcaacatcac
ccagcgccaccgggttcagcagcacaggtgccgcctcgccctcctcatggaatgccacat
cctggaccccctccgatgggcatgcctcccagaggcccgcactttggcactccaatggga
caccctggtatgccgccacatggaatgcgtggcccacccccgctaatgccaccacatgcc
ttcaatggaccaccaaggccaccaccatatggttaccggggaggacccatcccccctccg
cgaccagtgcagcgaccgctagtcccaatgaggggacccatgccgcagtga

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