Pleurodeles waltl (Iberian ribbed newt): 138268553
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Entry
138268553 CDS
T10800
Symbol
SNTB2
Name
(RefSeq) beta-2-syntrophin
KO
K24064
beta-syntrophin
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138268553 (SNTB2)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
138268553
NCBI-ProteinID:
XP_069074398
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Position
12:220786370..221156975
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AA seq
498 aa
AA seq
DB search
MAVWTRASKQGLLELLLRERWVRVLAELSGDTLALSAEPGSEGQALPNGTEGSPVGAPGS
PGRGADNSPVRTVRVLKQEAGGLGISIKGGRENRMPILISKIFPGLAAEQSRALRVGDAI
LSVNGCDLREATHDQAVQALKRAGKEVTLEVKFIREVSPYMKKPSLISELSWEGSSHHSP
NASISEDSGSPKHFHNFQDRKVIPLKMCFVARNLTMPDLENRLIELHSPDGRNTLVLRSA
DGATAHSWFMAIHTNIMALLPQVLAELSAMLGAGNPAGSTREVRHIGWLAEQVKPDGGLQ
QWRATVMAVTEKDMLLYDCMPWTKDAWASPSQSYPLIATRLVHSGGSGRGSPSIGSEISF
ATRTGTRQGIEMHIFRVETHRDLSCWTRTLVQGCHAAAELIREISLGCTLNKQQVKLTVH
YENGFTVSREEAGAGSVLYQYPFEKLKMSSDDGIRNLYLDFGGPEGELTLDLHSCPKPIV
FLLHTFLSAKMTRMGMLV
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtggacccgtgcctccaagcagggcctcctggagctgcttctgcgggagcgc
tgggtgagagtgctggctgagctgagcggggacaccctcgcactctccgccgagccgggc
tccgaggggcaggcgctgcccaatggcacggaagggagtcccgtgggcgcccccgggagc
cccggccggggggcggacaactctcccgttcgtaccgtgcgcgtcctgaagcaggaggcc
ggcggcctgggcatcagcatcaagggcggacgcgagaaccgtatgcctatcctgatttcc
aaaatcttcccggggctggcggcggagcagagccgcgcgctgcgtgtgggcgatgccatc
ctgtcggttaacggctgcgacctgcgcgaggccacccatgaccaagccgtgcaagcgctc
aagcgggccgggaaggaagtgaccctggaagtgaaatttatccgggaggtgtcgccgtat
atgaagaagccatctctgatttcagaattatcttgggagggatcctcccatcactccccc
aatgcaagcatcagtgaggattccggatcaccaaagcattttcataactttcaggaccgc
aaggtgatccctctcaaaatgtgctttgttgccaggaatctgaccatgccagatctagaa
aacaggctaatagagctgcactcacccgatggtaggaacacccttgtccttcgctctgcg
gatggtgccacggcacactcttggttcatggccatccacaccaatatcatggctctcctc
ccacaggtgctagcagaactcagtgccatgctcggtgctggcaatcccgcaggcagtacc
agagaagtcagacatattggctggctggctgaacaggtgaaaccggatggaggactgcag
cagtggagggctactgtgatggctgtaacggagaaggacatgcttctttatgattgtatg
ccatggacaaaagatgcttgggcatcaccatcccaaagctaccctctgattgctaccagg
ttagttcactctggtggttctggacgtgggtctccatccattggatcagaaattagcttt
gccacacggacaggcactcgccagggcatcgagatgcacattttcagagtggagacccat
cgggacctctcctgctggacccgtacgcttgtgcagggctgccatgctgctgcagagctc
atccgtgaaatctctttaggctgtactttaaacaaacagcaggtgaaactcactgttcac
tatgagaatggctttacagtatcccgggaggaagcaggtgcagggagtgtattgtaccaa
tatccttttgagaagctaaagatgtcatcagatgacggcatccgcaatctgtatttggac
tttggcggaccagaaggagagctgactctggacctgcattcctgcccgaaaccgattgtt
tttctcctgcacacattcttgtctgccaagatgacccgcatgggaatgctggtctga
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