Pleurodeles waltl (Iberian ribbed newt): 138268554
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Entry
138268554 CDS
T10800
Symbol
BCAN
Name
(RefSeq) brevican core protein
KO
K06795
brevican
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pwl00535
]
138268554 (BCAN)
00536 Glycosaminoglycan binding proteins [BR:
pwl00536
]
138268554 (BCAN)
04091 Lectins [BR:
pwl04091
]
138268554 (BCAN)
Proteoglycans [BR:
pwl00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
138268554 (BCAN)
Glycosaminoglycan binding proteins [BR:
pwl00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
138268554 (BCAN)
Lectins [BR:
pwl04091
]
C-Type lectins
Lecticans
138268554 (BCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
EGF
V-set
EGF_2
I-set
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
138268554
NCBI-ProteinID:
XP_069074399
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All DBs
Position
12:652981094..653071612
Genome browser
AA seq
1351 aa
AA seq
DB search
MPFSHRPKSRGAQSPPNNVLCVRGARAVRLCRSLCLWDGSPPARCSLKKLQCTPALPHCK
QPGAAERRERGARAGICSVPSRAARSPRGDRNWIWHFAQRGAMGTILLVFVLIQAMLVSS
SPTGEHSDDGKALRVSIPQHQPIKAVLSGTLTIPCHITYLAPVETSTVSRRVALITPRVK
WTFITDEKEVEILVARGRKVKISEAYRFRVTLPFYAASTSDVTLVLSELGSNDSGIYRCD
VQHGIEDDHDLVEVKVKGVVFLYREGFTRYAFTFAKAQEACSRISAHIATAEQLFAAYQS
GYEQCDAGWIADQTVRYPIQVPREGCYGDMDGHPGVRNYGVVDPEDMYDVYCYVEELHGE
VFLESTPNKFTLEQAENHCRELGAVIATTGQLYAAWNDGLDQCNPGWLADGSVRYPIITP
RERCGGSLPGVKTIFLFRNQTGFPDSSATYDVYCYRGPFNSYTESPEDYLVTQSELVIKD
VITVTEKLQELRLPDVESENEARGSVDSVPIHKDVNGTELEDPHPAIEVSTDNSNHEFHN
ETSDTETIPGPARSRDSGLRPDKNDQDTFFHEEEELKSESTLELGREKPEDVNAFDSAPD
HTTTSDEEKEKVHVESGGSGNYTNESEDENEQMQHEFYVTEIPELSKSLLPHVDVPSTGS
YNSNSPTEASESIGSGYIEEESHINENHNRRMAPSIVPHVSDIDLGGETTTNFVSFVVLN
AHSTEAKEESDKSLQSRHRVSETSEETLKEPGFPTNQPVEKYSKLSLVTSASYRASENFE
NKYPSKKIENYPKNNKETHEAPAILNSNTVATPKSILKETHFETLGEVKDGEFSGESATD
NTQNNTELFDQLNSGKASGLPNEHSVEHENSLGSPNDSEISGESSTQGIIKLFSAGVDAT
TAGSPHKADSGSHSNSASSPKEESEDAAVLQSGTTRAPFVIHEQTITNHEDHLGHDSEHL
AQSIHRPGREPQEVTTMHPIAEPPGNADSHEPSRSGQPSAIRIEDVVANSAFVETDIRDK
QRAGSGNQPFDANVQFEETFITKNYQEPGFSVPRSAAPAIHTVSPSHESTTHSFEHSMES
TSPYLKGTPLTDDPLSTARPLPLLPTERASLGAAATISDDCIPNPCQNGGTCTEEGERIT
CHCLPGHEGTFCEASRGECGQGWDKFHGYCYRHFLTRRSWEDAETNCRDAGGHLASINTP
EEQNFINNKYKEYQWIGLNDRTIEGDFQWSDGNPLLYENWHHGQPDSYFLSGEDCAVIVW
HDGGQWSDVPCNYHLSYTCKMGLVSCGPPPEVVNALRFGKLKKRYEIGSIVRHRCNDGPF
KRKSAIIRCQADGQWEKPKLTCVTRRHRTQH
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgcccttttctcacaggcctaaaagcagaggtgcacaaagccccccaaacaacgtcctc
tgtgtgcggggggcccgagccgtgcgcttgtgtcgtagcctttgcctgtgggacggatca
ccgcctgcgcgctgctctcttaaaaagctgcagtgcacccctgcattgccccactgcaag
cagccgggagcagcagagcggagggagcggggagcgcgcgccgggatctgcagcgtcccg
tcacgagccgcccggagcccccgaggagacaggaactggatctggcattttgcccaaaga
ggggcgatggggaccattttgctggtgtttgtgctcatccaggccatgctggtatccagc
tcaccgaccggggaacattcagatgacgggaaagcgctgcgagtgtctatcccccaacat
caaccaataaaagccgtcctctctggtaccctcaccataccttgccatatcacctacctg
gccccagtggaaacctcaactgtaagccgcagagttgcactgattacaccccgggtgaaa
tggaccttcatcacagatgaaaaggaggtggaaatcctagtggctcggggaagaaaagtc
aaaatcagtgaagcttaccgcttccgagtcaccttgcccttttatgcagcgtctacgtca
gatgtcactttagtcctgtctgaactcggatcaaatgactccgggatatataggtgtgat
gttcagcatggaatcgaggatgaccacgacctggtggaagtgaaagttaaaggagttgtc
ttcctctatcgggagggcttcacacgctacgccttcacctttgccaaagcgcaggaggcc
tgctccaggatcagtgcccacatagccacagcagagcaactgtttgccgcctaccaaagt
ggatatgagcagtgcgatgccggctggattgcagatcaaactgtgagatatccaatccag
gtcccccgggagggctgctatggggacatggacggacaccccggggttcgtaattatgga
gtggtggatcccgaagacatgtacgatgtatactgctatgttgaggagctacatggagaa
gtgtttttggaatctaccccaaacaaattcaccctggagcaggccgagaaccactgtaga
gagcttggagctgtaatagcgaccaccggccagctctatgcagcctggaatgacgggctt
gaccaatgcaaccctggctggttggccgatggcagtgtgcggtatcccatcatcacacca
cgggagcgatgcggcggaagtttgccgggagtcaaaaccatctttctgttccggaaccag
acagggttccctgattccagtgcaacatacgatgtgtattgttaccgaggacctttcaac
tcatacaccgagtctcctgaagattacctagtaacacaatctgaattggttatcaaggac
gttatcacagtgacagaaaaactgcaagagctgaggctgcctgatgttgaatccgagaat
gaggcaagaggttcagtggactctgtgccaattcacaaggatgtcaatggcacggagctg
gaggaccctcatcctgcaatagaagtaagcactgacaactccaaccatgagttccacaat
gaaacatcagacacagaaacaattcctggccctgcacgctcacgtgattctggtttgcgc
cccgataaaaatgatcaagatactttttttcatgaagaggaggaattaaagtcagaaagt
actctagagctgggtcgagaaaagccagaggatgtaaatgcttttgattcagctccggac
cacacaactacgtctgatgaggagaaagagaaggtccatgtagaaagtgggggttcagga
aattatacgaatgaaagtgaggatgaaaatgaacagatgcaacatgaattttatgtgaca
gaaattccagaattatctaagtcactcctgcctcatgtggatgttccttcaacaggaagc
tataactccaacagtcctactgaggcttcagaatcaattggatctggttacattgaagaa
gagagccacattaatgaaaaccacaaccgaaggatggccccttctatagtaccccacgtt
agtgatatcgacctcggaggcgaaacaacaacaaactttgtttcatttgttgttttaaat
gcacactccactgaagctaaagaggaatcagataagtctttgcaatcaagacacagggtt
tctgaaacttctgaggaaactctcaaagaacctggttttccaaccaatcaacctgttgaa
aagtattcaaaattatctctggtaacgagtgcttcatacagggcttcagaaaactttgaa
aataaatatccatcaaagaaaattgaaaactatcctaaaaataataaagagacacatgaa
gctcctgcaatccttaacagtaacactgttgccacgccgaaatctatattgaaagaaacc
cactttgaaacgttaggtgaagtgaaagatggtgaattctcaggggaatctgcaacagac
aatactcaaaacaacacagaactgtttgatcaactaaattccggaaaggcttctgggtta
cctaatgaacattctgtagaacatgaaaattcactgggttcccccaatgattcagaaatt
tcaggagaatcttcaactcaggggatcatcaaactttttagtgctggtgttgatgcaact
acagctggtagccctcacaaggctgattctggatctcatagtaattctgcatcctcaccc
aaagaagagagtgaggatgctgctgttctacaatctgggaccactagggccccttttgtt
attcatgaacaaacaattactaatcatgaagatcacctggggcatgattcagagcatttg
gcccagtcaattcaccgacccggcagggaaccccaggaagtaactacaatgcatcccata
gctgaaccacctgggaatgcagactcacatgagccttcaagaagtggacagccatctgcc
atacgaatagaagatgtggtagctaatagtgcatttgttgaaacagacatcagagacaag
caaagagctggctctggaaaccagccttttgatgcaaatgtacaatttgaggaaactttt
atcacaaaaaactaccaagagccaggtttttctgtacctagatctgctgcccctgccatc
cacacagtatcaccatcccacgagtcaacaacgcactcctttgaacattcaatggaatca
acaagtccatacttgaaggggaccccactaacggatgaccctttgtccacggctcgtcct
ctgcccctattgccaacagaaagggcaagtctaggagcagcagccaccatttcagatgac
tgcatacccaatccatgccaaaatggagggacctgcaccgaggagggagagcgcatcact
tgccactgtcttcctggccatgaagggacattctgtgaagcaagtaggggagagtgcggc
cagggctgggataaattccacggctactgctacaggcacttcttgactcgaagaagctgg
gaggatgctgagactaactgcagggatgctggaggtcacctggccagcatcaacacacca
gaggaacagaacttcatcaacaacaaatacaaggaatatcagtggattggtttgaatgac
aggacgatagaaggagattttcagtggtcggatggaaaccccttgctttatgagaactgg
caccatgggcaaccagacagctacttcctttccggagaagactgtgcagtgattgtatgg
catgatggcggccaatggagtgatgtgccttgcaactaccacttgtcatacacctgcaag
atgggccttgtgtcttgtggtccgccaccggaagtagttaacgcccttcgctttggcaag
ttgaaaaagcgatacgagatcggctccattgtgcgacaccgatgcaacgatggccccttc
aagcgcaagtcggctatcatcaggtgccaggctgatggccaatgggagaagcccaaactc
acctgcgttacacgacgacacagaacccaacactga
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