Pleurodeles waltl (Iberian ribbed newt): 138268560
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Entry
138268560 CDS
T10800
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138268560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138268560
Enzymes [BR:
pwl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138268560
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138268560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
Baculo_IE-1
zf-C3HC4_4
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
138268560
NCBI-ProteinID:
XP_069074419
LinkDB
All DBs
Position
2_1:778102924..778109978
Genome browser
AA seq
402 aa
AA seq
DB search
MAVSASPSKQIRTMKDLLYETEIHLLECKVCFEKFSQQQEHRPRNLPCGHIICQECVCSL
ALPRNPRLECPFCRKACRASETSDCLPVLHLIEILSSVVTDPFPSAAGDAVGGHVESLAP
AGCTLNLAFGGWGKLINPTGLAVCQNSGCVVVAHDGKKRINVLSSTGTCIQQFGVKGEFS
CDVKYALDVAVTLDGYIVVTDAGDRSVKVFDFNGRSKLVIKESFCLPWGVDINSQNEMLV
TDSDAGALCLVVADFRKGTLKKNLKIFTNLCHPRGVAVCPSNGAIVVIEHLKAAGRNATT
TRIKIFSSALKLIGQVDSFGFGLLLSSELHATAVAFDRQANILVADAHNRVVFGLGKLEE
FPSFRPIVTHGLSYPVALTCTADNSLLVLDSGDHSVKISSRR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgtccgcgagtccgtcaaaacaaatccggacaatgaaggatctgctgtacgaa
acggagatccatctattagaatgcaaagtctgctttgaaaaattcagccagcagcaggaa
cacaggcccaggaacttaccctgtggccacattatctgtcaggaatgtgtttgctctcta
gccctgcccaggaatccaaggctagagtgcccgttctgtcgtaaggcctgcagagcctct
gaaaccagcgactgccttcctgtgctgcacctcatagagatcctgagctctgtggttaca
gaccctttcccctcagcagcaggcgatgcagtgggaggccacgtggagagtctcgcgcca
gctggatgcacgcttaacctcgcctttggaggctgggggaagctaatcaaccctacaggc
ctagcggtgtgtcagaactctggctgtgtggtggtggcacacgatggaaagaaaagaatc
aatgtcttgagctccactggcacgtgcattcagcagtttggggtcaagggagagttcagc
tgcgacgtcaaatacgcactcgacgtggcagtcactctggacggctatatcgtggtcact
gatgcaggggaccgttccgttaaggtgtttgatttcaacggaaggagcaagttggtcatc
aaagagagtttctgcctgccttggggtgtggacatcaactctcaaaatgaaatgttggta
acggactccgacgctggtgctctttgcctcgtggtggctgacttcagaaaagggacgctg
aagaagaacctgaaaatctttacaaatctctgtcacccgcggggagtagcagtttgtcca
agcaatggcgctattgttgtaatagagcacctgaaggccgcggggaggaatgccaccact
acacggataaaaatcttcagcagcgccttgaaactcatcggccaggtagacagcttcggc
ttcggcctcctgctgtcgtctgagctgcatgcgactgcagtggcctttgaccgacaggca
aatatcctggtggcagacgcacataaccgggttgtgtttggtctagggaaactagaagaa
tttccatcctttagacccattgtgactcatgggctttcttatccagtggctctgacatgc
acagccgataattctttacttgtattagacagtggagaccattctgtgaaaatatcttca
aggcgctga
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