Pleurodeles waltl (Iberian ribbed newt): 138268617
Help
Entry
138268617 CDS
T10800
Symbol
FDPS
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl00900
Terpenoid backbone biosynthesis
pwl01100
Metabolic pathways
Module
pwl_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
138268617 (FDPS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pwl01006
]
138268617 (FDPS)
Enzymes [BR:
pwl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
138268617 (FDPS)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
138268617 (FDPS)
Prenyltransferases [BR:
pwl01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
138268617 (FDPS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Pfc11_Rna14-15-ID
Motif
Other DBs
NCBI-GeneID:
138268617
NCBI-ProteinID:
XP_069074548
LinkDB
All DBs
Position
12:663699507..663731870
Genome browser
AA seq
409 aa
AA seq
DB search
MWPRLLWTRRPHCCASWGRQMPVPRRGQTSLSWFKAGICGNPPKEQLTSKAPTTLRMSVN
GTKQSSSADKQEFVGFFTQIVRDLTEDDLQHLEIGEAIVRLKEVVEYTTPGGKNHRGLTV
LAAYRELAGPELQKSGNLQCVLTVGWCIELLQAFFLVADDIMDYSVMRRGKPCWYKKDGV
GLNAINDSFLLEACIYRLLKKYCRQQPYYLNLLELFLQTTYRTELGQSLDIFTAVPGKVD
FSLFTDQRYKAIVKYKTAFYSFYLPVAAAMYMAGIEGEEEHEHAKAILLEMGEFFQIQDD
FLDCYGDPTVTGKIGTDIQDNKCSWLVVEALKRVSPEQRQTLEENYGCDDAEKISRVKQL
YDDLNMRTVYLAYEEQSYSNLQQLIETHAKTLSKNIFRSLAALIYKRQK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtggccacgcctactgtggaccaggcggccccactgctgcgccagctgggggaggcag
atgcctgtccctcgacggggccagaccagcctatcttggttcaaagctggcatctgtggg
aacccgccaaaggagcagctgacgtccaaggcgcctacaactctgagaatgagtgtgaac
ggtacaaaacagtcttcttcagctgacaaacaggaatttgtcggcttctttacgcagatt
gtgcgtgacctcacggaagatgatctgcagcacctagaaattggagaagccattgtgcga
ctcaaagaggtggtggagtacacaacaccaggtgggaaaaaccatcgaggcctgacggtc
cttgcggcctaccgcgagctggcggggccggagttacagaagtcgggcaacctccagtgt
gtgctgactgttggatggtgtattgagctgctccaagcgttctttctggtggctgatgac
atcatggactattcagtgatgcggcgagggaagccctgctggtacaaaaaggacggcgta
ggcctcaatgccatcaatgactccttccttcttgaagcatgcatataccgcctccttaag
aagtactgtcgccagcagccctattacctcaacctgcttgagctcttcctgcagactacc
tacaggacggagcttggccagtccttggatattttcaccgcagtgcctggcaaggttgat
tttagcctgttcacagatcagaggtacaaagccatagttaaatacaaaacggccttctat
tcgttctacctgccagtggctgcagccatgtatatggctggcattgaaggagaggaagaa
catgaacatgcgaaagccatactgctggagatgggcgagtttttccagattcaggatgat
ttcctggactgctacggtgaccccactgtgacgggcaagattggcacagacattcaggat
aacaagtgtagctggctagtagtggaggccttgaaacgtgtttcacccgagcaacggcag
actctggaggaaaactatggctgtgacgatgctgagaagatatcaagagtgaagcagtta
tacgatgacctgaatatgcggactgtgtacctggcgtatgaggagcagagttacagcaac
cttcagcagcttattgagacccacgccaagaccttgtccaagaacatcttccggagcctg
gctgccttgatctacaagcgtcagaaatga
DBGET
integrated database retrieval system
