Pleurodeles waltl (Iberian ribbed newt): 138268693
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Entry
138268693 CDS
T10800
Symbol
TAF6
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138268693 (TAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwl03021
]
138268693 (TAF6)
03036 Chromosome and associated proteins [BR:
pwl03036
]
138268693 (TAF6)
Transcription machinery [BR:
pwl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138268693 (TAF6)
Coactivators
SAGA/TFTC/STAGA complex
138268693 (TAF6)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
138268693 (TAF6)
STAGA complex
138268693 (TAF6)
TFTC complex
138268693 (TAF6)
SAGA complex
138268693 (TAF6)
SLIK complex
138268693 (TAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Histone
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
138268693
NCBI-ProteinID:
XP_069074701
LinkDB
All DBs
Position
12:672463935..672490660
Genome browser
AA seq
676 aa
AA seq
DB search
MAEEKKLKLGNTLFPTESMKVIAESIGISQVPEETCQLLTEEVSYRIKEITQDALKFMSV
GKRQKLTTCDIDSALRLKNVEPLYGFTANEFIPFRYASGGGRELYFYDEKEVDLSDIINT
PLPRVPLDVCLKAHWLSIEGVQPAIPENPPPAPKEQQKAEATEPLKAVKPGQDEGSPLKG
KGQNAITPDGKGKEKKPPVLEGGPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAE
ALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYL
HELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLIAQICKNFSTTTNNIQSRITKTFTK
SWVDDKTAWTTRYGSIAGLAELGHDVVKALIVPRLQVEGERIRGVMEGPIVTNIDKIGAD
HVQSLLLKHCAPVLAKIRSPPDNQDQYKADYGFLGPLLCTHVVKARAQAAMQAQQVNRTT
LTITQPRQTLTLAQGAQPQNPSRTPSIIKVPSSITPIVQTLVSARPSTPTQPSPPPTKFI
VMSSTSGSSNPQQVITFSTTASGSSTSPVTTTVPSIQPIVKLVSTSQTTPSSTSTGNVQK
YIVVSLPTAADGKTPQPQGTLQQPSPTASASLALTGLPALTAVKQERSESPPAAAYITGA
SAAFGKTNGSDASQPS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggagaagaagctgaaactgggcaacaccctcttccccaccgagtcaatgaag
gtcattgctgaatccattggcatctcgcaggtaccggaagagacctgccagctgttgact
gaggaagtcagctaccggatcaaggagatcacccaggatgccctgaaattcatgagtgtg
ggaaagaggcagaaactgacaacttgcgacattgactctgccttaagactgaaaaatgta
gagccactttatgggttcactgcaaatgaatttatcccctttcgatatgccagtggagga
gggcgagagctgtacttctatgatgagaaggaggtggatctcagtgacatcataaacacc
ccactgccgcgagtaccgcttgatgtgtgtctaaaagctcactggctgagcatcgaaggg
gtgcagcctgctattccggagaaccctcctccagcccccaaagagcagcagaaagcagaa
gccacagagccattgaaagcagtaaagccagggcaggacgagggcagcccgctgaagggt
aaagggcagaacgctatcactccagatggcaaagggaaggaaaagaagcctccagtgctg
gaaggagggcctttacgcctcaaaccacgtagcattcacgagctgtctgtggagcaacag
ctgtactacaaggagatcacagaggcatgcgtgggatcctgtgaagccaagcgggcagaa
gcgctccagagtattgcaacagatcctggtctctaccaaatgcttcccaggttcagcacc
ttcatttctgagggggtgcgggtgaatgttgtgcagaataacctggcactattgatctac
ctgatgaggatggtgaaagcactgatggataaccccaccctctacctggagaagtatctg
catgagttgatcccagcagtgatgacctgtattgtcagccgacagctctgcctacgccca
gatgtggacaaccactgggctctccgagactttgcagctcgactcatcgctcagatctgc
aagaatttcagcactacgacgaacaacatccaatcccggatcaccaagacatttacaaag
agctgggtggatgataaaacggcctggactacgcggtacggttccattgctggtcttgca
gaactgggacatgatgtggtaaaagcgctcatcgtgccacggttgcaggtggaaggagaa
aggatacggggagtaatggagggtcccattgtaacaaacattgacaagattggagcagac
catgttcagagcttgttgttgaagcactgcgctccggtactggctaagatcagatcccca
ccagacaaccaggaccagtacaaggctgactacggtttcctgggtccccttctctgcacc
catgtggtgaaggcccgggcccaggcggcgatgcaagcccagcaggtgaatcggacaact
ctgaccatcacccagcccaggcagactctgacactggcacagggcgcgcaaccccagaac
ccatcacggacgccaagcatcatcaaggtgccaagctccatcacccctattgtgcagacg
ctggtgtctgcgcgcccctccactccaacgcagccttcgccgccgccaaccaagttcatt
gtgatgtcttctacctcgggcagcagcaacccgcagcaggtgatcaccttcagcaccaca
gcttccggctcctccacctccccggtcacgactactgtccccagcatccagcccatcgtc
aagctggtgtccacatcccagaccacgcccagcagcacgtcgaccggcaacgtccagaag
tacatcgtggtgtccctgccaacagcggccgacggcaagaccccgcagccccagggcacc
ttgcagcaaccgtctcccacagccagtgccagcttagcccttacaggactccctgcactc
acagccgtgaaacaggagcgcagcgaaagcccaccagcagccgcctacatcactggagcc
agtgccgccttcggcaagacgaatgggtcagacgcttcgcagccgtcctag
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