Pleurodeles waltl (Iberian ribbed newt): 138277117
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Entry
138277117 CDS
T10800
Symbol
MYO5B
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
138277117 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138277117 (MYO5B)
04131 Membrane trafficking [BR:
pwl04131
]
138277117 (MYO5B)
03029 Mitochondrial biogenesis [BR:
pwl03029
]
138277117 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pwl04812
]
138277117 (MYO5B)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
138277117 (MYO5B)
mRNA cycle factors
P-body specific factors
138277117 (MYO5B)
Membrane trafficking [BR:
pwl04131
]
Others
Actin-binding proteins
Myosins
138277117 (MYO5B)
Mitochondrial biogenesis [BR:
pwl03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
138277117 (MYO5B)
Cytoskeleton proteins [BR:
pwl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
138277117 (MYO5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
NPHP3_N
Myosin_N
AAA_16
AAA_22
Ac76
Motif
Other DBs
NCBI-GeneID:
138277117
NCBI-ProteinID:
XP_069075319
LinkDB
All DBs
Position
1_1:complement(145613856..146456813)
Genome browser
AA seq
1820 aa
AA seq
DB search
MSVFELYTRYTRVWIPDADEVWKSAEIVKDYKDGDTSLHLKLEDESLYQYPLDPKSNQLP
FLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYG
EDVIYAYMGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYF
ATVGGSANETNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDRRYHIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASANLPEFKDLSLTCAEDYFYTTLGGDTVIEGVD
DADDFEKTRQAFTLLGVKESHQMSIFKIIASILHLGNVEIRSERDGESSSIPNQDEHLNI
FCDLLGLEHDQMENWLCHRKLVTTSETYVKTMSVQQAMNARNALAKHIYAQLFNWIVQHV
NKALYTTSKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHTSSNHFKK
PRMSNVSFIVIHFADMVEYQSDGFLEKNRDTVYEEQINILKASKYQLVADLFHDEKDPAP
PVPKGKINIRAAKPALKAANKDHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDEKL
SFSFDPKRAVQQLRACGVLETIRISAAGYPSRWTYHDFFNRYRVLMKKRDIHQTDKKLIC
KTLLESLVRDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRAATIMIQKTVRGWLQRVKYR
RMKVAAVTIQRYTRGHLARRLADFLRKTRAAIVFQKQYRMLGVYRAYQRIRKAAITIQAF
TRGMFVRRVYHELLLQHKASIIQKHARRWMARRRFVLFRSAAIVIQCYFRRMKARQALKQ
LKIEARSAQHLKKLNIGMENKVVQLQRKIDDQNKEYKNLSEQLSSVTSSYSQELEKMQKE
LQRQRQTQEGENQLASLQEEIEQLRGDLAKARSERKILEDTYTTEKGLLQKRVSDLEEEN
ALLKDEKEELNNKILCRSEDEFTQTTVKENLEMKKEMEEERSRYQNLVKEYSRLEQRYDN
LREEVTLIKQTPGHRRNPSNQSSLESDSNYPSISTSEIGDTEDTMQLVEEAGLENAAMDM
TLFLKLQKRVRELELERKKLQAHLDKKEELENKKSQVIETTEDNNPDRDTDLAYNNLKRQ
ELESENKKLKNELNEVRKAIADRANQSNSSNHSQDGYNILLNQLKSANEELEVRKEEVLI
LRTQIVNAAHHKEQGGSMESGINSNASWPNSDKHVDPEDAIEAYHGVCETNRLLEAQLQA
QSRQHEEEVELLTGRIETLKEDMEKQQHVLLQALQLSPEAQVEFGIQHEITRLTNENLDL
KELAEKLEKNERKLKKQLKIYMKKVQEFEATQVTQGQAEKKRHEFTRQVTVQRKEKEFQG
MLEYYREDEAILIRNLISDLKPQQVSATVPCLPAYILFMCIRHADYINDDQKVHSLLTST
INGIKKVLKKHSDDFQMTSFWLANASRLLHCLKQYSGDEGFMTQNSPKQNEHCLANFDLT
EYRQVLSDLSIQIYQQLIKIGEGMLQPMIVSAMLENESIQGLSGVRPTGYRKRSSSMIDG
DHSYSLEAVVRQLNLFNSIMCDHGLDPEIIQQVFKQLFYMINAVALNNLLLRKDVCSWST
GMQLRFNISQLEEWLRGKNLHQSGAVQTLEPLIQAAQLLQLKKKTTEDAEAICSLCTVLT
TQQIVKILNLYTPLNEFEERVTVAFIRNIQAHLQDRNDPPNLLLDFKYMFPVLFPFNPSS
ITMDSIHIPASLSLDFLNKV
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtctttgagctctacacccggtacacaagggtttggattccggatgcagatgaa
gtgtggaaatcggcagaaattgtcaaagattacaaagatggagacaccagccttcacctg
aaactagaagatgaatcgctgtatcaatatccactcgaccccaaaagtaaccagctcccg
ttcctgcgtaacccggacattctggtgggagagaatgacttgacggctctcagctatctt
cacgagccagcagttctgcataatttaaaggtccgctttctggagtccaaccacatctac
acctactgtggtattgtgcttgttgccataaatccgtacgaacaattgccaatctatgga
gaagatgtcatctacgcgtacatgggccaaaacatgggtgacatggatccccacatcttc
gcggtggcagaagaagcctacaagcagatggccagggatgagaagaaccagtccattata
gtgagtggggaatctggtgctggcaaaaccgtgtctgccaagtatgccatgcggtatttt
gccaccgttggaggctctgccaatgagactaacgtcgaagagaaagtcctggcatccagt
cccatcatggaggccattgggaatgctaaaaccaccaggaatgacaacagtagtcgattt
gggaaatacattcaaattggttttgatcgaagatatcatatcattggtgccaacatgagg
acatacctgctggaaaaatcaagggtcgtattccaggcagaagaggaaagaaactatcac
attttctaccaactgtgtgcttctgccaaccttccagagttcaaagacctgtcacttacc
tgcgcagaagactatttctacacaactctgggaggcgacacagtcattgaaggagtggat
gatgctgatgactttgagaaaacccgtcaggccttcactttgcttggcgtaaaggagtct
catcagatgagtatcttcaagatcatcgcatccatcctgcacctcggaaatgtagaaatt
cgctcggagcgagatggagagtcgagtagcataccaaatcaagatgagcatctgaatatt
ttctgtgacttgcttgggctggagcatgaccagatggagaactggctatgccatcgcaag
ctggtgacaacgtcggagacctatgtaaagaccatgtctgtgcagcaggcaatgaacgcc
aggaatgctctagccaagcacatctacgctcagttgttcaactggattgtacagcatgtc
aataaagctctgtacacgactagcaagcagcattccttcatcggtgtccttgacatctat
gggtttgagaccttcgaagtgaacagcttcgaacagttctgcatcaactatgcaaatgaa
aagctccagcagcagttcaattcgcatgtcttcaagttggagcaggaggagtacatgaag
gaacaaatcccgtggacgctgatagatttttacgacaaccagccctgcatagacctgatt
gaagcaaagctcggcattctggatctcttggacgaggagtgtaaggtacccaaaggaact
gaccaaaactgggcacagaagctgtacgacagacatacgagcagcaaccatttcaagaaa
ccccggatgtcaaatgtttccttcattgtcattcatttcgcagacatggtcgaatatcag
tctgatggattcctggagaaaaaccgagacactgtatatgaagaacaaatcaacatactg
aaggccagcaagtatcagctggtagctgacctcttccatgatgagaaggatcctgctcct
cctgttcctaagggaaaaatcaacattcgggccgccaaaccagctctgaaagcagcaaat
aaagaccacaagaaaaccgtaggacatcagttccgaaactccttgcatcttcttatggag
acactcaatgccactaccccacattatgtccgctgcatcaagccaaatgatgagaagctt
tccttcagtttcgatccgaagagagctgtccagcagctgagggcctgtggtgtgttggag
acgatccgtatcagcgcagctggctacccgtccaggtggacctaccatgacttcttcaac
aggtaccgggtcctgatgaagaagagggacatccatcaaaccgataagaagcttatatgc
aagaccctgctggagagcctcgtgagggatcctgataaattccagtttggtcggaccaag
atattcttccgcgcaggccaggtggcctacctggagaagctccgcgccgacaagttccgt
gcagccaccatcatgattcagaagacggttcggggctggctgcagagggtgaagtacagg
aggatgaaggtggctgctgtaaccatccagaggtatacgcgaggacacctggcgcgcaga
ttggcagatttcctccggaagacacgagctgctatcgttttccagaagcagtaccgaatg
ctgggggtgtaccgtgcctaccagagaatccgcaaggccgccatcaccatccaggctttc
acccggggcatgtttgtcaggagagtctaccacgagctcttgttgcagcacaaggcgagc
atcattcaaaagcacgcgcgacgctggatggctcgcaggaggtttgttctgttccggagc
gctgccatcgtcatacagtgctacttcaggcggatgaaggcgcggcaggcgctgaagcag
ctgaagatcgaggcacgctcagcgcagcacctgaagaagctgaatatcggcatggagaac
aaggtggtccaactgcagaggaagatcgatgatcagaacaaggaatataagaacctgagc
gagcagttatcctctgtcactagctcctacagccaggagctggagaaaatgcagaaggag
ctgcagcggcaacggcaaacccaagagggcgagaaccaactggcaagcctgcaggaggaa
attgagcagctccgcggtgacctagcgaaagcgcggagcgagcgcaagatcttagaagac
acgtacacgacagagaaagggcttctacaaaagagagtatcagatctggaagaggagaac
gccctcttaaaggatgaaaaggaggagctcaacaacaaaattctctgtcgatctgaagat
gaatttactcagaccacagtaaaggaaaaccttgagatgaagaaggaaatggaagaggag
cgatcgcggtaccagaacctcgtgaaggagtactcgaggctggagcagagatacgacaac
ttgagggaggaggtgacacttataaagcaaactccaggccacaggaggaatccgtccaac
cagagcagcttagagtcggactccaattacccctccatttcgacttccgagatcggggac
acagaagacaccatgcagctagtggaggaggccgggttggagaacgctgccatggacatg
accctgttcctaaagctacagaagagggtgcgagagctggagctggagaggaagaagctg
caagcacacctggacaagaaagaagaactagaaaacaagaaatctcaggtgatagaaaca
acggaagacaataatccggaccgtgatactgatcttgcgtacaacaatctgaagaggcaa
gaactggaatcagaaaataagaaactgaaaaatgagctcaatgaagtgaggaaggccatc
gcagaccgtgccaaccagagcaactcatccaatcatagccaggatgggtataacatttta
ttgaatcaactgaaatcggccaatgaggagctggaggtgcggaaggaagaggtgctcatt
ttgaggactcagattgtgaatgcagcccaccataaggagcaaggagggagtatggaatcg
ggcattaactcaaatgcaagctggccaaacagcgacaaacatgttgacccagaagatgca
attgaggcctaccatggtgtctgcgagactaacagactcctggaggcgcagctccaggct
caaagccgacagcacgaggaggaggttgagctcctcacagggcgcatcgagactctgaaa
gaagacatggagaagcagcagcatgtcctgctgcaggctctccagttgtcacctgaagct
caggtggagtttggcatccagcatgaaatcacccgtctcacaaatgaaaatctggatctt
aaggagttagctgaaaaactagaaaagaatgaaaggaagctaaagaaacaactgaagata
tacatgaagaaagtacaggaatttgaagcgacacaggtgacacaaggtcaggcggaaaag
aaacgtcatgaattcaccagacaggttacggtccagaggaaggaaaaggaatttcaggga
atgctggagtactacagagaagatgaagcaatccttattagaaacctcatttcagatctt
aagcctcagcaagtgtctgccactgtgccatgccttcccgcctacatcctcttcatgtgc
atccgacatgcggattacatcaatgacgatcagaaggtgcattcgcttctcacctccacc
atcaacggcattaagaaggtgctcaagaaacacagcgatgactttcagatgacatccttc
tggttagccaatgccagtcgcctcttgcattgcctgaaacaatacagtggggatgaggga
ttcatgacccaaaattcgcccaagcagaacgagcactgccttgcaaactttgacctcacg
gagtaccgccaagtgctgagtgacctctccatccagatctaccaacagctcattaagatc
ggggaagggatgctgcaaccaatgatagtatcggccatgttggaaaatgagagcattcaa
ggtctatcaggtgtgagacccacaggctacaggaagcggtcatccagcatgatagatggg
gaccactcttacagccttgaagcagtcgtcaggcagctgaacctcttcaacagcatcatg
tgcgatcacggcttggaccccgagatcatccagcaggtcttcaagcagctcttctacatg
atcaatgcggtggcgctcaacaatctcttgctgaggaaggacgtctgctcctggagcact
ggcatgcagctcaggtttaacataagccagctggaggagtggttgcgtggaaagaacttg
caccagagtggagctgtgcagaccttagaacccctaatccaagctgcacagctccttcag
ctgaagaagaaaacgactgaggatgcggaggctatttgttcattgtgtactgtgttaacc
acccaacagattgtaaagatacttaatctttacacgccgctaaacgagtttgaagaacga
gtaacagtcgccttcatcagaaatattcaggcacatttgcaagatcgaaatgacccgccg
aatctactgttagactttaagtacatgttccctgttctatttccattcaacccctcatca
atcacaatggactctattcacatcccagcttctctcagcctggactttttgaataaagta
tga
DBGET
integrated database retrieval system
