Pleurodeles waltl (Iberian ribbed newt): 138279448
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Entry
138279448 CDS
T10800
Symbol
DCC
Name
(RefSeq) netrin receptor DCC isoform X1
KO
K06765
deleted in colorectal carcinoma
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
138279448 (DCC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pwl04515
]
138279448 (DCC)
Cell adhesion molecules [BR:
pwl04515
]
Immunoglobulin superfamily
DCC/UNC5 family
138279448 (DCC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
Ig_3
I-set
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
V-set
Fn3_VIN3
Ig_Rha78A_N
C2-set_2
fn3_SORL1
Interfer-bind
Protocadherin
Sp38
V-set_CD47
EphA2_TM
Arylsulfotran_N
FAM176
GH101_dom-5
Motif
Other DBs
NCBI-GeneID:
138279448
NCBI-ProteinID:
XP_069075509
LinkDB
All DBs
Position
1_1:155179050..156236189
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AA seq
1449 aa
AA seq
DB search
MEPSLGLLAARKLALVLLGFALLSSDAQVHSSQVKSFISLRFLSEPSDAVTMRGSNVLLN
CTAESDQGNLVIKWRKDGVFLNLGADERRQLLPNGSLLIQNIIHSRHHRPDEGLYQCEAS
IDGIGSIISRTAKVTVAGPLRFLSQTESVTAFLGDTALLKCEVVGEPMPSVHWQKDQEDM
IFSPDDTRLVVLPSGALQISKIQAGDSGSYRCLAKNPGSSRTGNEAEVRILSESGLHRQQ
VFLQRPTNVLAIEGQDAVMECSVSGFPTPSIMWMFGDEVILTRSKKYSLIGSSNLLISNV
TSDDAGTYTCVVTYRNENSTAAADLSVMVPPRYLNHPSNLYAYESMDIEFECAVSGKPPP
TLKWTKNGEVVIPSDYFQIVGESNLRILGLVKSDEGFYQCLAENDAGNVQTSAQLIIPEP
ALPSSSVLPSAPRDVVPVLVSSRFVRLSWRPPAETKGNIQVYTVFFSRDGANRERALNTS
QPGSLQLTVGNLSPEQTYLFRVVAYNEWGPGESSLPAKVATQPELQVPGPVENPQAVSTS
PTSILISWEPPAYANGPVQGYRVLCTETITGREQNIEVDGLYYKLEGLRKFTEYSLRILA
YNRYGPGVSSEDITVVTLSDVPNAPPQNISLEVVNSRSIKVSWLPPPSGTQNGFITGYKI
RHKKTTRRGEMETLEPNNLWYLFTGLEKGSQYTFQVSAMTVNGTGPSSDWFTTETPENDL
DESQVPDQPSSLHVRPLTTSIVMSWTPPLNPNIVVRGYIIGYGVGSPYAETVRVDSKQRY
YSIENLEPSSHYVISLKAFNNAGEGVPLYESATTRSMTDPIDPLEVDFYPLLDDFPTSVP
DISTPMLPPVGVQAVALTQDAVRVSWADNSVPKNQKSTEVRFYTVRWRTSYSSSAKYKSA
DTTALSHTVTGLKPNTMYEFSVTVTKGRRSSTWSMTAHATTYESAPSSTPKDLTVITREG
KPRAVIVSWQPPLEANGKITAYILFYTLDKNSPIDTWVMESISGDRLTHQIMDLSLDTVY
YFRMQARNSKGVGPLSDPIPFRTPKVEHPDKMANDQGRHGDGAYWPVDNNLIGRNSIDES
PIGQIRPPHGSVTPQKNSNLLVIIVVTVGAITVVVVVIVAVICTRRSSAQQRKKRATHSA
GKRKGSQKDLRPPDLWIHHEEMEMKNIEKPSGSDPSGRDSPRQSCKDLTPVSHSQSESQL
SSKNTSHSGPDTEEVGSSMSTLERSLAARRATRAKLMIPMDSQPNNPSVVSAIPVPTLES
AQYPGILPSPTCVYPHPQFTLRPVPFPTLSVERGFAAGRTISEGPSTQQSSMLPQAQLEH
SNNEDAPSRTIPTACVRPTHPLRSFANPLLPPPMNAIEPKVPYTPLLSQTGSNIPKSQVK
TASLGLGGKARSPLLPVSVPTAPEVTEEGHKHPEDPSSVRVYEQDDLSEQMASLEGLMKQ
LNAITGSAF
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggagcctagccttggattgttagcagcaaggaaactggctttggtattactcggattt
gccttgctcagctcagatgctcaagtacacagttcacaggttaagagtttcatatcattg
cgcttcctgtcagagccctcggacgctgtcaccatgcgggggagtaacgtgcttttgaac
tgcacggcggagtctgatcaagggaatcttgtgatcaagtggaggaaggatggagtgttt
ctgaatcttggtgcagatgaacggcggcaactactgcctaatggctccctcctgatacaa
aacataattcattcccggcatcataggccggatgaaggtctttatcaatgtgaggcttct
atagatggaattggctccatcatcagccggacagctaaagtcactgtagcagggccattg
cgtttcctttcccaaacagagtcagttacagccttcttgggggacacagctttgctgaaa
tgtgaagtggttggagaaccgatgccctctgtgcactggcaaaaggaccaggaggatatg
atcttcagcccagatgacacaagattggttgttttgccgtctggagcattacaaattagc
aaaattcaggcaggagacagtgggagctatcggtgtctggcaaaaaatcctggcagttca
aggactggaaatgaagctgaggttcgaattttgtcagaatctgggttacataggcaacaa
gttttcctgcaaagaccaacaaatgttctagcaattgaagggcaggatgcagtaatggaa
tgctccgtttccggattccccacaccgagtataatgtggatgtttggagatgaagttatt
ctaacaaggtcgaagaagtactccttgattggcagcagtaacttgcttatctcaaatgtt
acgagtgatgacgctggcacgtacacgtgcgtggtcacgtacaggaatgaaaacagcact
gcagcagcagacctctctgtaatggttccaccacgatatttaaatcatccttcaaaccta
tacgcatatgagagcatggacattgagtttgaatgtgccgtctctggaaagccgccacct
acgttgaagtggacaaagaatggggaggttgtcattcccagtgactactttcagattgtg
ggagaaagcaacctgaggattcttggccttgtaaagtcggatgagggattttaccagtgt
ttagctgaaaatgatgctgggaatgtacagacgagcgcacaactaatcatcccagagcct
gctctccccagctccagtgtccttccctctgctccccgagatgtggtccctgtcttggtc
tcaagccggtttgtgcgtctcagctggcggccgcctgcagaaaccaaaggaaatattcag
gtgtacactgtattcttctccagagacggtgccaacagggagcgagctctgaacacatcc
cagccggggtcacttcagctgactgtggggaacctgagcccagagcagacctacttgttc
agagtggtggcctacaatgaatgggggccaggagagagctctctgccggcaaaggtagcg
acacagcctgagctgcaagttccaggtccagttgaaaacccacaggctgtttctacctcg
cctacctcaatcctcatttcctgggaaccgcctgcttatgcaaacggcccggttcaaggt
tacagagtcttgtgtacagagacaattactggacgagaacagaatatagaagttgatgga
ctatattacaaactagaagggctgagaaaatttacagaatactctctgcgaattctagct
tacaatcgttatgggccaggcgtctccagtgaagacattacagttgtaactctttcagat
gtaccaaatgctccccctcagaacatctcactggaagttgtcaactcacgaagcatcaaa
gttagctggcttccaccgccttcaggcacacaaaatggatttattacaggttataaaata
cggcacaagaagacgacccgcaggggtgagatggaaactctggagccaaataacctctgg
tacttgttcacaggtcttgagaaaggaagtcagtatacttttcaggtctcagccatgaca
gtgaatggtaccggaccctcctctgactggttcactactgaaacgccagagaatgatctt
gatgaatctcaggttcctgatcagccaagctctcttcatgtccggccattgactaccagc
atagttatgagttggactccaccactcaaccccaacattgttgtgagaggatacattatt
ggctatggtgttggcagcccttatgcggagacagtgagagtggacagcaagcagagatac
tattccattgaaaatttggagccgagttcccattatgtaatttccttgaaagccttcaac
aatgcaggggagggagttccactatatgaaagcgcaaccacgagatccatgacagatccc
attgaccctttagaagttgatttttatcctttgcttgatgatttccccacctcggtccca
gatatctccacccccatgctccctccagtaggtgtgcaagctgtagcccttactcaggat
gcagtcagagtcagctgggcagacaactctgttccaaagaaccagaagtcaacagaagtt
cgcttttacacagttcgttggaggaccagctactcttctagtgcaaaatacaagtctgca
gatacaacagccctcagtcacactgttacgggtctgaagccaaacaccatgtatgagttc
tcggtcacagtaacaaaaggtagacggtcaagcacatggagtatgactgcacatgccacc
acatatgaatcagccccttcttccactcctaaggacttgacggtaattacacgggagggt
aaacctcgagctgtcattgtcagctggcaacctccactggaagccaatggcaagattaca
gcttacatcctattttacacattggacaaaaattcacctatagatacctgggtgatggag
tccattagtggtgacagactcacacatcaaataatggatctcagcttagacactgtctac
tactttcgaatgcaagcacgtaattccaaaggagttggacccctctcagaccccattcct
ttcagaacacccaaagtggagcaccctgacaaaatggctaatgaccaaggtcgacatgga
gatggtgcatattggcctgtagataataacctaattggtaggaacagcatcgatgagtct
ccaattggtcagattcgacctcctcatggtagtgtgacccctcagaaaaacagcaacctg
ctggtgatcatcgtggtcactgtaggtgccatcactgtggtggtcgtggtaattgtggcg
gtgatatgcacgaggcgctcctcagcacaacagagaaaaaaacgtgcaacacatagtgct
ggcaaaagaaaagggagccagaaggaccttagacctccagacctctggattcatcatgaa
gagatggagatgaagaacattgagaaaccatcaggctctgatccctctggaagggactcc
ccaagacaaagctgtaaagatcttactccagtgagtcacagccagtcagaatctcagctc
agcagcaaaaatacttcacattcagggcctgatacagaggaagttggaagcagtatgtct
acattagagcgctcgcttgcagcccgcagagcaacacgtgccaagctgatgattccaatg
gactctcagccaaacaatccctccgtagtcagtgcaattccagtgccaactctggaaagt
gcccagtacccaggaatccttccgtccccaacgtgtgtctacccacatccacagtttaca
ctgcgtcctgtgccattcccaactctgtctgtagaaaggggatttgcagcaggtcgaaca
attagtgaaggcccatccacacaacagtcatcaatgttaccacaagcacagctggaacat
tcaaacaatgaggatgcacccagcagaaccatccccactgcctgcgtccggccaacgcat
cctctccgcagctttgcaaaccctttactacctccaccaatgaatgcaatagaacctaaa
gtcccttacaccccacttttatctcaaacagggtcaaacattcctaaatcccaagtaaaa
acagcatcactgggattgggaggaaaggcaagatctcctctccttccagtttctgtgcca
acagcaccagaagtaacagaagagggccacaaacatccagaagacccttccagtgtaagg
gtatatgaacaagatgacctgagcgaacagatggcaagcttggagggtttaatgaagcaa
ttgaatgctatcacaggctctgctttctag
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