Pleurodeles waltl (Iberian ribbed newt): 138282386
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Entry
138282386 CDS
T10800
Symbol
RTTN
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
Cilium and associated proteins [BR:
pwl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
138282386 (RTTN)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138282386
NCBI-ProteinID:
XP_069075997
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Position
2_2:392122358..393101125
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AA seq
2233 aa
AA seq
DB search
MDVSALLKKLGHQLVEIRERALKNLLCKLDHNLISYADLVQEKSLFVLLLEWFNFPNVPM
KEDVLKLLNKLVKHPSAAQWLVEIGAVEFFSQLRCSVEPDLQAAVDGILDGLFVLNPQEL
TGYLTEYNQEPPQPLGSYTVLPPEDEIVAGYFHQDNQDSQSTEIPLKKPVVVCQGVKCLK
ISTFPWLTLTTTDRHVLSSNESSIRSNNHRLVWNTCELLQDVIMQDFPAEIFLQRPRIVQ
SLLSLLKLAFGRDGKHYLALNAVSCLHQLCICLRTRLKFHRDHNFFCSKQDNVSQNSSVS
YGPEAQAVPNSQNPSPGSSCSPRPSVIGRTGQRLRGDGQDWDDASSSGRSSQPQINSRTS
TASPLNMGHIEMPMIENEDILELQFQQISLPQFCVSVLEFAVPLLRTGSRKTTMQVLELL
TENMLLIGEALSDEVWEDCSPIGQELRGKLLVSLDSLGESVHYHKSNTGSEQPGPLLMHH
RTAFLSISLLTVRLLQTLLPVEKASEILPDSLKSALFILSMDMPFCLTYPNVHESTTAYL
EQLNPENYSIYKQAAITVHSIECTCTFMTNVKKQGEKNLPELLELAEQALNSLSYHQHYP
LIHEFIHVCSDIWKSAQATTSLLAGSQKVFLRLLSHSVSSVKREVYRCCLDTVKECLGIQ
NVTKTVSSICHGVHFLLQPRVLYEISTFGLQDSSNEVNSAAKGILLYLLQGRLMMTALTW
NKFMEALHPVIAVLQGYANPEDPLGNCILTLSEKTSDKGGSILPKTVRLATVLRLLFCKK
QSVRSLALKYLTFHLMSEEGSSLKRPKLQGTVLSSAVNLFILDKPLELKLDDTGTSFFKA
ETVKKVYEILISETVDLALRKSAAEQLAVIMQDVTMHEVVKNLGVVEKILNFLTECINQD
GKIMECMVLPCLTLLRKLVYADAAVRLSLAQQTSVLLTLIRVSLLMQNESTILTEVAAVL
CLLLFDDVSKADAWSDGISIDYSTAPPFSLPAAVVRRFHLPVRVTGHHVVSPYCVPLPLS
DDYLASKPVSDMLKMAWNLSWYHGIDGVLLKPTDSGTETQEFLYTLRLSTEDIVIMRVTH
TASGLQECLDSITHAVSHGEVKTAVARMSFYLLNDRLSLKCSVDSSMSTLKCLPWHTVLN
RFWQVLPASIEDEKLLADVISFLTKLLRDQRKASDVEDLTWILERLLKHNPNPLLDLLEQ
IESQGKHESDDAQIAVRHHLQKQLVLFFNTLLASFLAVTDRKCLILAGAFRTQLALKLLQ
CLRVTDAPHFYGLPSLERTLRGMVHVTALPGWSTYSPTFEPFTICTKYLTGLLEVISSFY
VEWGGNAQSYMGKGVTKSTVLCLLHLSHEMMTQVKNTEWVSLWSLPYDNGNEEQTSTPLG
LAWLIPLWVDRDPEVRFTSLSIGSSVASVEEGCIALADSCQNISGGLWGTVLNILLDHTE
CSMVRREAAYILQNLLVIPMPADMEETEGCSWQGPCVHDDESGLSLVGKPALQALLHHCH
FYEHLNQMIKHCYLNGHTFDVRDNFASWTPQNYSYGLDDTVLFWRAPSNLSNGSQGSQST
STTTIFPLSPSVGSEIEQVPVPPISTTSVPDTRLISQGHTDIIKTTSPSPEHSRLSAVLN
EQYAIVTPPLMSAVCGLLSNLLFVAPKETAFSLNQTHTLTALNSIVSADFIERCVLDLKA
LQPMLHHTENLKSQLSFLLEYVSSFSGLLQSCLMVDSNLVIQEELLKPLLANTFFVLSMR
FNTRQDSELTSTVHQTWADLFAFVVTLLRKSGPICFPSVITALGKNWTAIFETVSECVHL
SVSAPHLYSSCLQFLSVLFAEEGKNHLHEEPSSILPSLLDEISSSGYRLCELLLKSYEGK
SSDDVLRRVCVAALMSLLAVSKSAQNHALEVDLIGSCMEQMKHCHAQLNLDYLRPGKTAN
KKKEDGLIKELKIVTQLLRNCLYQNEKCKAAALEAHLVPVLHSLWPWILMDDPLMQAVLH
LLCVYTADYPAGGASLCCVVASVNVMPTSQRGPSSNSLMYNIVKLASQLSSENSTVQQMA
FTLLSNLVVTHDCKGVMQKSNFLQNFLSLSLPKGGSKSLGTLANLWLKLLLNMSFSEDGQ
QMIMRLNGSLDLLLEMSKHKQKGMLPMALLVLHNLCFHAASKPKILANDKAVSILATCLE
SDHTIQQKIGASALWALLHNYQKAKVILKNPSVKRRVEDAVSLTKKIGMEQEENELTAYY
LKCLANLSQLLNS
NT seq
6702 nt
NT seq
+upstream
nt +downstream
nt
atggacgtctccgcactactcaagaaactgggtcatcagctggtggagatcagagaacga
gccctcaagaatctcctgtgtaaattagaccacaacttaatttcatatgctgacctggta
caagaaaagtcgctgtttgtgctcctgttagaatggttcaattttcccaatgtaccaatg
aaagaagatgtattgaagctattgaataagctggtaaagcatccctctgcagcccagtgg
ttagttgagattggggcagttgaattcttttctcagctacgatgcagtgtggagccagat
ctacaggctgcagttgatgggatcctggatgggctctttgtactcaatccacaagaactt
acaggatatcttacagagtacaatcaagagccaccccaaccacttggaagctacacagtt
ttgcctccagaagacgaaatagttgctggatattttcatcaggataaccaggatagtcaa
tcaacagaaattccactaaagaaacccgtggtagtctgtcaaggtgtgaagtgtctgaaa
atatccacgtttccatggctgaccctcaccacgacggacaggcacgttctgtcttcaaat
gaaagctccataagaagtaataaccatcgtctagtctggaatacgtgtgagcttttacag
gatgttatcatgcaagattttcctgctgaaatcttcctccagaggccaaggattgttcag
agtcttctctcgctgctgaagctggcttttggaagagatggaaagcattacttggctctg
aatgctgtttcttgcctccaccagttgtgcatatgcttgaggaccaggctcaagtttcac
agagatcacaatttcttctgcagtaagcaagataatgtttcccagaactcttctgtatcc
tatggaccagaagcacaagctgttcctaattctcagaatccatcccctggaagtagttgt
agtcctcgcccttctgtgattgggcgaacaggacaaagactgagaggcgacggccaggat
tgggatgatgcgtcttccagtggaagaagttcccaaccgcaaataaactccagaacatcc
actgcctctccgctaaatatgggccacatcgagatgccaatgatagaaaatgaggacata
ttggaactgcagtttcaacaaattagccttcctcagttctgtgtttcagtgctggaattt
gctgtacctcttctcagaactggcagcagaaagacgactatgcaggttttggagttgctt
actgagaacatgctgctcattggtgaagcactgtcagacgaagtttgggaggactgtagc
ccaattgggcaagaactgagagggaagctgctcgtgtctctggattcgctgggtgaaagc
gtacactaccacaagagtaacacaggttccgagcagcccggacctctgctgatgcaccac
aggacagcattcctaagcatctctcttctaacagtacgactactacaaacactcctccca
gttgaaaaggctagtgagattcttcctgacagcttaaagagcgccttgtttattctctcc
atggacatgcccttctgtttgacttatcccaacgtccatgaatctactacagcctacctg
gagcagctaaatcctgaaaattacagcatttataaacaagctgctatcactgttcattcc
attgagtgtacctgcacctttatgaccaatgtgaagaaacagggagagaagaatcttcca
gaattgttagaattagcggagcaagctctgaacagcctttcgtaccatcaacactatccc
ttgattcacgaattcatccacgtttgctccgacatttggaaatctgcacaggcgaccaca
tctctgctggctgggagtcaaaaagtgttccttcggttactgtcacattctgtgtcatct
gtgaaaagggaagtttatcggtgctgtttggatactgtgaaggaatgtttgggtatacaa
aatgtcaccaaaactgtctcttccatttgccacggagttcattttcttctgcaaccaaga
gtactgtatgaaatctccacctttggactgcaggattccagtaatgaggtaaactctgct
gccaagggaattctgctgtacctgcttcaggggcgattaatgatgacagcattgacctgg
aacaagtttatggaggcactccaccctgtgattgcggttctgcagggttatgcaaatcca
gaagatcctctaggcaattgcatcctgactctaagcgaaaaaacctctgacaaaggagga
agcattctcccaaaaactgttagacttgcaaccgttttgcgacttctgttttgcaaaaaa
caatctgtgcgttctctggcgctgaagtatttaaccttccatttaatgagtgaagaagga
tccagtctgaagagacccaaattgcagggtacagttctgtccagtgctgtgaatttattt
attcttgataaacctttggaattaaagttggacgatacaggaacatcattttttaaggcc
gagactgtaaaaaaagtatatgaaatcctgatctctgaaactgtggacctagctttgaga
aaatctgccgcggaacagctagccgtaattatgcaagatgtcacaatgcatgaagttgtt
aagaatctgggtgttgtagaaaagatcttgaactttttaactgagtgcatcaatcaggat
ggcaagataatggagtgtatggtgttgccatgcttgacactgttaagaaagcttgtatat
gcagatgcagcggttcgtctgtccttagcccagcagacctcagttcttctcacgttgatc
cgagtgtcattgctaatgcagaatgaaagcaccattctcacagaagttgctgcagtactt
tgtctcttgctatttgatgatgtttctaaagcagatgcatggtcagatggcatttcaatt
gattattctacagcacctcctttcagtctccctgcagcagtggtcagacgttttcatctc
cctgtaagagtgacaggtcatcatgtagttagcccatactgtgtgcccctacctttatct
gatgactacttggcttcaaaaccagtgtccgacatgctaaagatggcctggaatctttca
tggtaccatgggattgatggagtcctattaaaaccaactgactctggtaccgaaacgcaa
gaatttttatacacattgagattatctacagaagacattgttataatgcgggtcacacac
actgccagtggacttcaagagtgcttggactctattacccatgcggtgtcccatggggaa
gttaagactgcagttgcaagaatgagtttttatcttttaaatgacagactctctctaaag
tgcagtgtcgactcgagtatgtcaactttgaaatgcttgccgtggcacaccgtactaaac
agattttggcaggtgcttcctgctagcattgaagatgaaaagcttctggctgatgtgatc
agtttcctaactaagctcttaagggaccagaggaaagcttcagatgtggaagatctgacc
tggattctagagcgtcttctcaaacataacccaaatccacttttagatttgctggagcag
attgaatcccagggtaaacatgagtctgatgatgcacagattgcagtaagacatcatctt
caaaaacagcttgtgttgtttttcaacacactattggccagctttttggctgtgactgac
aggaagtgcttgatacttgctggcgccttcaggactcagcttgctctaaagctgctccag
tgtctacgtgttacagatgcgccccatttctatgggcttccctctctggagagaacgctg
agaggaatggtacatgtcactgccctgccagggtggagcacatattcacctacctttgag
cctttcaccatctgtacgaaatatctgactggccttcttgaggtgatatcgtctttttat
gttgaatggggaggaaatgctcaatcctatatggggaaaggtgtcacaaaaagcacagtt
ttgtgcctgcttcacttgtcccatgagatgatgactcaggtgaaaaacacggaatgggtg
tctttgtggtccttaccttatgataatggcaatgaagagcagacgtctactccactaggc
ttggcttggctgattccactgtgggtggacagagatccagaggtgaggtttaccagcttg
tcgattggatcctctgtagcatctgtcgaggaaggatgcatcgcattagccgacagctgc
cagaacatatctggaggactgtgggggaccgtgctaaacattctgttagaccatacagag
tgcagcatggtgcgaagagaggctgcatacattcttcagaacctgcttgttattccgatg
ccggcagatatggaagagacagagggctgctcttggcaggggccatgtgtccacgatgac
gagtccgggctgtcgctcgtaggaaaacctgctcttcaggccttgttacaccactgccac
ttctatgaacatttgaaccaaatgattaaacactgctacctcaacggtcatactttcgat
gtccgtgataactttgcaagttggactccgcagaattattcatatggattggatgacacg
gttctgttctggagggctccgtccaatttgtccaatggttcacaaggttctcaatccaca
tccactactacaatttttccattgtccccatctgttgggagtgaaattgaacaagttcct
gtccctccgatatcaaccacttcggtgccagatactagactgatatcccaaggtcacact
gacattattaaaactacatctcccagcccagaacattctcgactgtcagctgttttgaat
gagcagtatgccatagtgacgccgcctctcatgtctgcggtttgcggcctattaagtaat
ttgctgtttgtggcacctaaagagactgcattttccctaaatcaaactcatacactaaca
gctcttaacagcattgtgagtgctgactttattgaaagatgtgtcttagatttaaaagct
ttacaacctatgctgcatcatacagaaaatttaaagtctcagctttcgttcctgcttgaa
tatgtgtcttcgttctctgggctcctgcagtcatgccttatggtagattccaatcttgtg
attcaggaggaattgctaaaacctcttctggcaaataccttcttcgtcctctccatgcgt
tttaatactcgacaggactctgaattaacatccacagttcaccaaacgtgggcagacttg
tttgcctttgtggttactctgttgaggaaaagtggccctatttgttttccatctgtaata
actgctcttggaaagaactggactgcaatatttgagactgtttctgaatgcgtacatttg
tctgtgtctgccccacacttgtactcctcctgcttgcagttccttagtgtcctgtttgct
gaagaaggaaagaatcatctccatgaagaaccaagttcaatactgccttctctcctagat
gagatttcttcatcaggatacagactttgtgaattattacttaagagttatgaaggaaag
tcctctgatgatgtgttgagacgagtgtgtgtcgcagctttaatgtcactgctggcagtc
agtaaaagtgcccaaaaccacgctttggaagttgacctaattggcagctgcatggaacag
atgaaacactgccacgcacagctgaatctagattatttaagacctggaaaaacagcaaac
aaaaaaaaggaggacggtctcataaaagagctgaagattgttacgcagctgctaagaaac
tgcctttatcaaaatgaaaaatgcaaagctgcagccttagaagctcatcttgttccagta
ctgcattctctttggccatggattttgatggatgatccactgatgcaagcagttctgcat
ttgctttgtgtctatacagctgactatccagcaggcggtgcctcactttgttgcgtagtt
gcatcagtaaatgtcatgcccacttcacagaggggcccatccagcaactctttgatgtac
aatattgtgaaactggcttcacagctttcttcagagaacagcacagttcagcaaatggct
tttactcttctttctaacctggtggtgacacatgattgtaaaggtgtaatgcaaaagagc
aactttctccagaacttcctctctctgtcactgccaaaaggaggaagtaagagtcttggt
accctagctaatctgtggctgaagctgctgctgaacatgtctttttcagaggatggccag
caaatgatcatgaggctgaatggcagtttagacttattgctagaaatgagcaagcacaaa
cagaagggcatgctaccgatggctcttcttgttctccataacctctgctttcatgcagct
agcaaacccaagatcctggctaatgataaagctgtatccattctggccacttgtctggaa
agtgatcataccattcagcagaaaattggagcttctgccctatgggctttgctacacaat
tatcagaaggcaaaagtgattttgaaaaatccatctgtaaaaagaagagtggaagacgct
gtctccttgacaaagaaaattggtatggagcaagaagaaaacgagttgactgcttattat
ttgaaatgccttgctaatctatcacagcttctgaacagctaa
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