Pleurodeles waltl (Iberian ribbed newt): 138282456
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Entry
138282456 CDS
T10800
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138282456 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pwl03036
]
138282456 (SS18)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138282456 (SS18)
GBAF(ncBAF) complex
138282456 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
138282456
NCBI-ProteinID:
XP_069076150
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Position
2_2:complement(527473860..527719918)
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AA seq
387 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNPTGPPPAPRPHNMAADGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMPGPGPNQMNMPNNSMNMPPSSHGTMGGYNHSVPSSQNMPVQNQMT
MSQGQPIANYGPRPSMNMQPNQGPMMHQPPSAQQYSMQQGGGQHYQGQQAPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQDDYYADQYSHGGQGPPEGMNQPYYPDGNSQYGQ
QQDTYQGPPQQQGYAPPPQQYPNQQGYPGQQQGYGPAPSAPGPQYPNYPQGQGQQYGGYR
PAQPGPPQPQQQRPYGYDQAQYGNYQQ
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcttttgcagctccgcggcagcgtggaaagggcgagatcacaccggcggca
atccaaaagatgctggatgaaaataaccatcttatacaatgtataatggattatcagaat
aaaggaaagacctctgaatgttcacagtatcaacagatgttgcatacaaatctagtttat
ctagccacaatagcagactccaatcaaaatatgcagtctcttttgcctgctcctcccact
cagaacatgcctatgggtcctggcgggatgaatccaactggcccccctccagctccccgc
ccccataacatggcagcggatgggatggtgggtggggggcctcctgcaccccacatgcaa
aaccagatgaacggccagatgcctgggcctaaccatatgccaatgcctgggcctggacca
aaccagatgaacatgcctaacaattccatgaacatgcctccaagtagccatggcactatg
ggaggttataatcactctgtgccatcatctcagaacatgccagtgcaaaaccagatgact
atgagccaaggacaacccatagccaactatggcccacgaccaagcatgaatatgcaacca
aaccaaggtcctatgatgcatcagccaccttctgcacaacaatacagtatgcagcaggga
ggagggcagcattaccaaggacagcaagctccaatggggatgatggggcaggtaaaccaa
ggaaaccatatgatgggtcagcggcaaataccaccatacagaccaccccaacagggccca
ccacagcagtactcgggccaggatgactattatgctgaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccaaccgtattaccctgatggaaattcgcagtatggacag
cagcaggacacctatcagggacctccacagcagcaggggtatgccccacccccacagcaa
tacccaaaccagcaaggctatcctggacagcagcaaggttatggccctgctccgagtgct
ccaggtccccagtatcccaactaccctcaagggcaaggccagcagtatggaggttataga
cctgcacagccaggtcccccgcagccacaacaacagcggccttacggctatgaccaggct
cagtacggaaactatcagcagtga
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