Pleurodeles waltl (Iberian ribbed newt): 138282502
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Entry
138282502 CDS
T10800
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138282502 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pwl01009
]
138282502 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138282502 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
pwl03029
]
138282502 (RB1CC1)
Protein phosphatases and associated proteins [BR:
pwl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138282502 (RB1CC1)
Membrane trafficking [BR:
pwl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
138282502 (RB1CC1)
Mitochondrial biogenesis [BR:
pwl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
138282502 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
SpoIIID
Motif
Other DBs
NCBI-GeneID:
138282502
NCBI-ProteinID:
XP_069076263
LinkDB
All DBs
Position
2_2:complement(620840969..621327504)
Genome browser
AA seq
1610 aa
AA seq
DB search
MQQFLNEHTKARSTDPGDIIMKLYVFLVNTGTTLTFDTELAVQTVADLKHAIQTKYKISV
QQQILVVNGGECMAPDRRVCSYSAGTDTNPIFLFNKEMILCDRPPVIPKTTFSAENEMEL
KVEESLMMPAVFHTVASRTQLAVEMYEIAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDC
THSYQKLLLRFENAYSGYLQSIDDIKLKLTNLGAAVSVMAKIPLLECLTRHSYRMCLGRL
ISSAELEGTESLDSEKSSDVVLFSEEPQMNKSHLASLSKPVEQSARESIGPESVGEARDS
QTSEEMCDENLPSFNVSLLDWINVQDRPNDVESLVRKCFESMSRLDPRIIHPFLAEGRQT
IAKLDNQSMKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLP
DLCLSHANQLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQ
ALFRLLTELLERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYRAWANALVKDGKHLYEA
EKTKRETFGKLFRKSFLRNRLFRGLDSWPSSFCTRKPRKFDSELPDISLTDLQFLQSLCP
PEVQLFLRLPLLCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASSGQPSPQS
VKTPRIETTAGINTTSSRTPPSLSLQGPLCQPLDLPGPLEELSPDSIDAHTFDFETITHP
NIEQSLKQGSLDLDSLAESPESDFMSAVNEFVVEENPMSPNVSDPQSPEMMVESLYSSVI
NAIDSRRMQDTKVCQKDGGVENVSLKVKLEKCKVAALESQLNLRNIKEDLVHFRTHVEKE
QCDFTGTLKCVSVEIRNIIERVKVSLETILKENHQKELQSIENRYEIKLKTLREDGEINE
HKINQLKEDLKSLEAVLRNRDYEFALVKNENEAFVCLQNEKDQKLIGLENTTRDQHCLIL
ELKSAEEKALQDFAKLQAEHNEKIRLLKADYESQEKSCLMEFEQKLHDRHTQELEKITAD
HATLLEKLKSENLKRLEEMQESHVTIVIEKEEQLQDLKQRVSELSDLRCKLEVEMALKEA
ETDEIKLLLEENTVQQQKTLKSLIDKETECLRQEISRLTQKIQENNDEYQLGLAEMRTLM
TIEKDQCISELVDRHEEETNLLRAELSKVSSLYQETCEGEKRLQEQIIELNTKLDDDVKA
LRTQKEEETSALRGQLEQCQATLHRLKEDKELLLVTQEQDRTALLQNFTSEKEEAVQAAV
KEFELQREAVEKELLEKVQQLEKQVNQRPADELLSGDSASLVSELQQRLEEEKCSFLEQL
ECQGKKMNEEMQNLKTSLIAEQQTHFNTVLTRERVKKESIINDLTEQLKTLTQQQGRDKD
LIETLSEDRACLLEEKKKLEEEISNLRSSTFLQTACPVSVSESGGACAPDFGMEMERLIC
EAAGPEEERIDSALETSMMTVQENMQMLSEEKQRIMLLEKTLQLKEEENKRLNQRLMSQS
MSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAVLDLKPGE
CASGASRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagtttctaaatgaacacactaaagcacgcagcacggatcctggagacatcatc
atgaagttatatgtgtttctcgtaaacaccggaacgacccttacttttgacacagagctg
gcagtacaaacggtagctgacctcaaacatgccatccagacaaaatataaaatatctgtt
caacaacagatcttggttgtcaatggcggggagtgtatggctccagacagaagggtctgc
agttacagtgctggcacggacacaaatccaatatttctattcaataaggagatgatactg
tgtgaccgtccaccagttattccaaaaaccacattttctgcagagaatgaaatggagttg
aaagttgaagaatctctcatgatgcctgcagtttttcacactgtagcatccagaacacag
cttgctgtggaaatgtatgaaattgccaagaagctttgctcgttttgtgaaggtctggtc
cacgatgagcaccttcagcatcagggttgggctgctatcatggccaatttagaggattgt
acgcactcctaccaaaagctgctactcaggtttgaaaacgcatattcgggttatctacaa
tctatagacgacatcaagctgaagcttactaacttgggggcagcagtttctgtaatggcc
aagattccactgctggagtgcctaaccagacatagctacagaatgtgcctagggagactg
atttcttctgctgaactcgagggaactgaaagcctggactctgaaaagtctagtgatgtg
gtgcttttttctgaagaacctcaaatgaacaagtcacatttagcatcactttccaagcca
gtagaacaatctgctagagaaagcattggcccagaaagtgttggggaggctcgggactct
cagacctctgaagaaatgtgtgacgaaaatctgccttcttttaatgtttccttgttagac
tggataaatgtacaggacagaccaaatgatgtggagtctttggtcaggaagtgttttgag
tctatgagcagattggatccacgaataatacatccttttttggcagaaggtcgacaaact
attgccaaattagataatcagagtatgaaagccattaaaggacttgaagataggctctat
gctctggatcagatgatagccagctgcagcaggctggtgaatgaacaaaaagaacttgct
cagggatttttagccaaccagaaaagagcagaaaacttgaaagatccttctgtgctgcct
gatttgtgtctaagtcatgcaaatcaattgatgataatgctgactaaccataggaagctt
ttggacataaaacagaagtgtaccactgccaaacaagaacttgcaaataacctacaagtc
agattaaagtggtgttgctttgtgatgcttcatgctgatcaagatggagaaaaactgcaa
gccttgtttcgactcttaacagagctactagagcgagtgaagattgtagaggctctcagt
acagttcctcagatgtattgtttggctgttgtggaggttgtaagaaggaaaatgtttata
aaacactacagagcgtgggccaacgctttagttaaagatggcaaacatctctacgaagct
gaaaaaacaaaaagggaaacttttgggaaactttttagaaaatcttttttaagaaatcgt
ctgttcaggggtcttgactcttggccttcatccttttgtactcgaaagcctcgaaagttt
gacagtgagcttccagatatctcgttaacagacttgcagtttctgcagtctctttgtcct
ccagaagttcagctattcctcaggttacccttactttgtgactttgaacctctacaccag
catgttctcgcattacataacttggtaaaagctgcgcagagtttggatgagatgtcacag
accatcacagacctcctcagcgaacaaaaggcttccagtggtcagccttcaccacagtca
gtgaaaacaccaaggatagaaacaacagcaggaattaatactacctcttcacgaactcct
ccatcactcagtcttcagggtccgttatgtcaacctttagatctccctggtccattagaa
gaactgtctccagacagcattgacgcccatacttttgattttgaaacaatcacccatcca
aacatagaacagtctcttaaacaaggatctcttgacttggactccttagcagaaagccca
gagtcggattttatgtctgctgtgaatgagtttgttgttgaggaaaatccaatgtctcca
aatgttagtgatccacagagtccagaaatgatggtggaatcattgtattcatcagttatt
aatgccatagacagtcgacgtatgcaggacacaaaagtgtgccaaaaggatggtggtgta
gaaaatgtgtccttaaaagttaagttggaaaaatgtaaagttgctgccctagaatcccaa
ttaaatttaaggaatatcaaagaggaccttgttcacttcaggacacatgttgaaaaagaa
cagtgtgactttactggtaccctaaagtgtgtatcagtagaaattagaaacattattgag
agggtgaaggtttctcttgaaacaattttgaaagaaaaccatcaaaaagaactgcagtct
atagaaaacaggtatgaaataaagctgaaaacattaagggaggatggggaaataaatgaa
cacaaaattaatcaattaaaagaagatttgaagagtcttgaagcagtcttgcgaaataga
gattatgagtttgctttagtgaagaatgaaaatgaggcttttgtatgtctgcagaatgag
aaagatcagaagttgattggtttggaaaacacaacaagagatcaacattgtctaatcctg
gaattgaaatctgcagaggagaaggcattgcaagattttgcaaagcttcaagctgaacac
aatgagaaaataagacttttgaaagcggattatgagagccaagaaaaaagttgtcttatg
gaatttgaacagaaattacatgacagacatacacaagagctcgaaaagataacagctgac
catgcaacccttctagagaaattgaaaagtgaaaatctgaaaagacttgaggaaatgcag
gaatcacatgttacaattgtaattgaaaaggaagagcagctgcaagacttaaaacaaaga
gtctctgaactgtctgacttaaggtgcaaattggaagttgaaatggcactgaaggaagcg
gagacagatgaaattaaactcctgctggaggaaaacacagtccagcagcagaagactttg
aagtcactgattgacaaagaaacagaatgtttaaggcaagagataagtaggttaactcag
aaaattcaggaaaacaatgatgaatatcaactgggcctagctgaaatgagaactttaatg
acaattgaaaaagaccaatgtatttcagaactggtggatcgtcatgaagaggaaaccaac
ttgctacgtgcagaactgagtaaagtgtcttctttatatcaagaaacctgtgaaggggaa
aaaagactgcaagaacaaataatagaactaaacactaaattggatgatgatgtgaaagca
cttagaactcaaaaagaagaagaaacatctgctctgcgtgggcaattagaacagtgccaa
gctactctccatagacttaaagaggacaaagaattactgctggtaacccaagaacaggac
agaacagcgcttctccaaaactttactagtgaaaaagaggaagctgtccaagcagctgta
aaagagtttgagttacagagagaagctgttgaaaaagaactgttagagaaagtacagcaa
cttgaaaagcaagtgaatcaaagacctgctgatgaattattgagtggggattcagcaagc
ttggtatcagaacttcagcagaggcttgaggaggaaaaatgttcatttttggaacagctt
gaatgtcagggtaaaaaaatgaatgaagaaatgcagaacctcaagacatcgctgattgca
gaacaacagacacattttaacacagtacttacaagagaaagagtgaaaaaagaaagcatc
ataaatgatctgactgagcaactgaaaacgcttacacagcaacaaggtcgagacaaagat
ttgattgaaacactttctgaagaccgtgcttgtttactagaggagaagaaaaagttggaa
gaagaaatcagtaatctgcgaagcagcacttttcttcagaccgcctgtccggtttcagtt
tctgaatctggtggagcctgtgcccctgactttggaatggagatggagaggctgatctgt
gaagctgctggaccagaagaagagaggatcgattcagccctagaaaccagcatgatgact
gttcaggaaaacatgcaaatgttgtcagaagaaaagcagaggataatgttacttgaaaaa
actttgcagttgaaagaagaagagaataagcgtttgaatcaaagattgatgtctcagagc
atgtcatctgtgtcttctagacattcagaaaaaatagccattcgtgacttccaggttggt
gatctcgtactcattatcttggatgaacgtcacgacaattatgtgctatttactgttagc
ccaaccttgtacttcctgcattcggagtctcttgctgtgctggacctcaaaccaggtgag
tgtgcttccggtgcatctcgaagaccctgggtgttaggaaaagtcatggaaaaagagtat
tgtcaagcaaaaaaggcacaaaaccgattcaaagttcctttgggaacaaaattttacaga
gtgaaagctgtgccatggaacaagaaagtatag
DBGET
integrated database retrieval system
