Pleurodeles waltl (Iberian ribbed newt): 138282555
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Entry
138282555 CDS
T10800
Symbol
TRIM55
Name
(RefSeq) tripartite motif-containing protein 55 isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138282555 (TRIM55)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138282555 (TRIM55)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
138282555 (TRIM55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
Spectrin_SESTD1
Motif
Other DBs
NCBI-GeneID:
138282555
NCBI-ProteinID:
XP_069076363
LinkDB
All DBs
Position
2_2:709213531..709680927
Genome browser
AA seq
533 aa
AA seq
DB search
MSTSLNYNSLTKEQQTMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCASDIFQASNS
YLPTRGGTTVASGGRFRCPSCRHEVILDRHGVYGLQRNLLVENIIDIYKQESTRPERKSS
EQPMCEEHEDEKINIYCLNCEVPTCSMCKVFGVHKDCQVAPLSQVFQGQKSELTEGIAVL
VGSNDRIQAIISQLEETCKAVEESCRRQKESICEKFDFLYAVLEERRSEMTQMITREQEQ
KLEHVRSLIKKHGDHLETVSKLVESGIQFMEEPEMALFLQNAKALLQKITEATKVLQLEK
IEPGYENMNNFIVNLSREERIIREIDFERDDDDYEEGAEGEEFEDVHTESSGEEEEGAER
VSLEQPLTIATPSTVSASPLVEETTSPTPAAAAQGEVAASGVQLSAKSDVPELSTAEATA
DALVHPNSPKIQTRQASSPTPVQKIDRPAEGGPPVPMKVKVEVETSDVTEATKQPPPATG
NNMDTNTAPGSNQTGSEAVSPAVTAQAAAGSEGASGEQGHHLFSFSWLNSLTD
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctctctgaattacaattccctgaccaaagagcagcaaacaatggacaaccta
gagaagcagctgatctgccccatctgccttgagatgtttagcaaaccggtggtgatcctc
ccgtgccagcataatttgtgtcggaagtgtgcaagtgacatatttcaggcctcaaattcc
tacttgccaacaagagggggcaccacagtggcatctggtggccgatttaggtgtccctcc
tgcagacatgaagtgattctggacagacatggagtgtatggactccagagaaatcttctg
gtggagaacataattgatatctacaagcaagaatctaccagacctgaaaggaaatcatca
gaacagcctatgtgtgaagagcatgaagatgaaaaaatcaatatttattgtttaaactgt
gaagtgccaacatgttccatgtgcaaagtatttggtgtgcacaaggactgtcaggttgca
ccactttcacaggtttttcaaggacaaaagtctgagctcacggagggcattgccgtgtta
gtgggaagcaacgacagaatccaagccatcataagccagctggaggaaacctgcaaggct
gtggaggaaagctgccggagacagaaagagagcatctgcgagaagtttgatttcttgtac
gcggtgctggaagagagaagaagcgagatgacccagatgatcacaagagaacaggagcag
aagctggagcatgtccgctccctcatcaagaagcacggcgatcatttggagactgtgtcc
aaactggtggagtcaggcatccagttcatggaggagccagaaatggcgctcttcttacag
aatgcaaaagctttgttgcaaaagatcacagaagccacgaaagtattacagctggaaaaa
attgagcctggatatgaaaatatgaacaatttcatagtcaacctcagtagagaggaacgg
ataatccgagaaattgattttgaaagagatgatgacgactatgaggaaggagctgaaggt
gaagagtttgaagacgtccatacggaatcttcgggagaagaagaagaaggtgcagagagg
gtgtcactggaacagcctctgacgattgcaacacccagcacagtgtctgcttcacctcta
gtcgaggagacaacatcaccaaccccagcagctgctgctcagggcgaagtcgcagctagt
ggtgttcagctaagtgcaaagtctgatgtgccagaactgtcaacagcagaggcaactgcc
gatgccttggtccaccctaattcgcctaaaatccaaacaaggcaagcaagcagccctacg
ccagtgcaaaagattgaccgtccagcagagggaggacctcctgtccccatgaaggtgaag
gtggaggtcgagacgtcagatgtcacagaagcaacaaagcagcctcctccagcaacagga
aacaacatggacacaaacacagcaccaggcagtaatcagactggatctgaggctgtttcc
ccagcagtgactgctcaggctgcagcaggcagtgaaggggcgagtggagagcaggggcat
cacctgttctccttctcctggctgaactccttgaccgactga
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