Pleurodeles waltl (Iberian ribbed newt): 138282570
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Entry
138282570 CDS
T10800
Symbol
ARFGEF1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
138282570 (ARFGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138282570 (ARFGEF1)
Membrane trafficking [BR:
pwl04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
138282570 (ARFGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
THAP4_heme-bd
Motif
Other DBs
NCBI-GeneID:
138282570
NCBI-ProteinID:
XP_069076394
LinkDB
All DBs
Position
2_2:complement(718222986..719184483)
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AA seq
1850 aa
AA seq
DB search
MHEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALDEIKDESGKQSPPHGDAKT
GSSTLPPVKSKTSFIEADKYFLPFELACQSKCPRIVNTSLDCLQKLIAYGHLTGNAPDNT
TPGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLGSKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMEKERHRLQHHLQQSPLSHHE
LELPEMSHLAEQSVDHLTQEHDGELEHHANNVDRSLEEEIGTENGFDVSSAENEQTEADL
VITTESISHCGVELCDGEINESEENAQNIVRSIIQDMVNTVVGGLEDTAAISGSVECTIS
TLEDGSDGENVHANGIPGTPISMTYTPSLPDDRLSVSSSDTQESGNTSGSSPGAKFSHIL
QKDAFIVFRSLCKLSMKPLPDGPPDPKSHELRSKVISLQLLLSILQNAGPVFKTNEMFIN
AIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETST
SSFDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELG
MTNMQELSLRKKGLECLVSILKCMVEWSKDQYVNPNSQTTLGQEKPVEQETNDTKHPETI
NRYGSLNSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQY
LQEQGMLGTSQEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVS
ALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLH
SPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSSKP
SVASEKQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAA
FSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMK
QKNIDTIKTLITVAHTDGNYLGPSWHEILKCISQLELAQLIGTGVKPRYISGTVRGREGS
FTGTKDQAPDEFVGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDRIFTGSIRLDGNA
IVDFVRWLCAVSMDELLSPTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVG
CNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRNRSPTIRDMVVRC
IAQMVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTIVFEKHFPATIDS
FQDAVKCLSEFACNAAFPDTSMEAIRLIRHCAKYVSDRPQAFKEYTSDDMNVAPEDRVWV
RGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTYEKHWWTDLFRIVFRIFDNMK
LPEQQTEKAEWMTTTCNHALYAICDVFTQYFEVLSGVLLDDIFSQLYWCVQQDNEQLARS
GTNCLENVVILNGEKFTLEIWDRTCNCMLSIFKTTIPHALLTWQAAVGDNDMVSQSDMRE
KQLDTVSQKSVDIHETVQLRTADNRRQTQPSLGSPGNEMQHLVRPTAKLPEQKIFAALLI
KCVVQLELIQTIDNIVFFPATSKKEDAENLAAAQRDAADFDFHVDTQDQGMYCFLTSQQL
FKLLDCLLESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETSSLACGLRILFRMYM
DKSRAGAWEEVQQRLLNVCSEALSYFLTLTSESHREAWTNLLLLFLTKILKISDDRFKAH
ASFYYPLLCEIMQFDLIPELRAVLRRFFLRIGGVFQISQLPDQELATNEQ
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atgcatgagggcaaaaagaccaagaacatgttcctgacccgggccctggagaagatcctt
gcagacaaggaggtgaagaaggcgcaccactcccagctgcggaaagcctgcgaggtggcg
ctagatgaaatcaaagacgagtctggaaaacaaagtccgccccatggagatgcaaagacg
ggttccagcactcttccaccagtaaaatctaagaccagcttcatcgaagcagacaagtac
ttcttaccgtttgagttggcatgtcagtcgaagtgcccccggattgttaatacatcttta
gattgtctgcagaaactaattgcatatggacatctgactggcaatgcaccagataacaca
acgcctggcaaaaaattaatagacagaataatagaaacaatatgcggctgctttcaaggc
ccacagaccgacgaaggagttcagttacaaataataaaggcattgctcacagcagtaaca
tctcaacacatagaaattcacgaaggaacggtgttacaggcagtgaggacatgctacaac
atctacctaggaagcaaaaatctaataaatcagactacagcgaaagccaccctaacacaa
atgctaaatgttatatttgcacggatggagaaccaagcacttcaggaagctaagcagatg
gagaaggaacggcacaggcttcagcatcacttgcagcagtcacctcttagccatcacgag
cttgagttacctgaaatgagtcaccttgcagagcaaagtgtggaccacctaactcaagaa
cacgatggagaacttgaacaccatgcaaataatgtggataggagccttgaggaagaaatc
ggaacagaaaatggttttgatgtttccagtgcagaaaatgaacagacagaagctgacttg
gtgataacaacagaaagtatctctcattgtggtgtagaattatgtgatggggaaatcaac
gaaagtgaagaaaatgcgcagaatattgtccggagcattatacaggatatggtgaacact
gttgttggaggtttagaagataccgctgccataagtggaagtgttgaatgtaccataagc
actttagaggatggcagcgatggtgaaaatgtgcatgccaatggaatccctggaacacct
atatctatgacatatacaccatcactgcctgatgaccggttgtctgtctcatccagcgac
actcaggaatctggaaatacttcaggatcttctcctggtgctaagttctcccacatttta
caaaaggatgccttcatagtcttcaggtcactgtgcaaactttccatgaaacctctacca
gatgggccaccagatccaaagtcccacgagttgaggtcaaaggttatttccttgcagttg
cttctgtccattctgcagaatgcaggaccagttttcaagacaaatgagatgtttatcaat
gctattaagcagtatctgtgtgttgcactatcaaagaatggagtttcatctgttccagaa
gtttttgaactatctctttcaatcttcctaaccttgctgtccaacttcaagacgcaccta
aagatgcaaattgaggtgtttttcaaggaaatatttctgtacatactagaaacatctaca
agttcatttgatcataaatggatggttattcaaactcttacacggatttgtgctgatgca
cagagcgttgtggacatttatgtaaactatgactgtgatttaaatgctgcaaacatattt
gagaggttggtgaatgatctgtccaagattgctcaagggcggggcagccaagaacttggc
atgacaaatatgcaggagttgagcctgaggaagaagggtttagagtgcttagtatcgatc
ttaaagtgcatggttgagtggagtaaagatcagtatgtaaatcccaactcgcagacaaca
cttggtcaggaaaagcctgtagaacaggagacaaatgacactaaacaccctgagaccatt
aaccgatatggaagtctaaactcactggactccacagcatcatcaggaattggcagctac
agtacacagatgtctggtactgacaatcctgagcagtttgaggtcctaaaacaacagaag
gagatcattgaacaaggaatagatttatttaacaagaagccaaagagaggaatccagtac
ttgcaagaacaaggaatgcttggcacatcacaagaagatattgcccagttcttgcatcaa
gaggaaagactagattctactcaggttggggagtttcttggcgataacgataaatttaac
aaagaagtcatgtatgcatacgtggatcagcatgacttttcaggaaaagattttgtgtcc
gctcttcggatgttccttgaaggcttccgtcttccaggagaggcacagaaaattgatcgt
ctaatggagaaatttgctgccagatatttggaatgtaatcaagggcaaaccctgtttgct
agtgcagatacagcctatgtcctggcatactcgattatcatgttgacaacagatcttcat
agcccacaggttaagaacaaaatgactaaagaacagtacattaagatgaacaggggcata
aatgatagcaaagatcttcctgaagagtacctttcggccatctacaatgaaatagcggga
aagaagatatctatgaaagaaacaaaagaactcacaattcctacaaaatcaagcaagcca
agtgtagctagcgagaagcaaagacgactgttatataatttagaaatggaacagatggct
aaaactgcaaaagcccttatggaggcagtgagccacgtgcaggctccgttcaccagtgca
acacatttagagcatgtgaggccaatgttcaagttggcatggacaccattcctagctgct
ttcagtgtgggcttgcaagactgtgatgatacagaagtagcttcactttgcctggaaggc
atacggtgtgcgatcaggattgcatgcatcttcagtattcagcttgaaagagatgcttat
gtccaggcccttgcaaggtttacattgctcacagtgagctctggtataactgaaatgaag
cagaagaacattgacactatcaagacgcttattacggtggctcatactgatggaaactac
ttaggaccttcctggcatgagattttaaaatgcatcagtcagctcgagttggcacagttg
ataggcactggcgtaaagccacggtacatttctggaacagtacggggaagagaaggttca
tttactggaacaaaggaccaggctcctgacgaatttgtgggcctaggactagttggtgga
aatgtggactggaagcagatagcaagtattcaagaatcgattggggaaacaagttcacag
agcgttgttgtggcagtcgacagaatattcacaggctccattcgactggatgggaatgct
attgttgacttcgtccgttggctctgtgctgtatcaatggatgaactgctttctcctacg
catccccgcatgttcagcttgcagaaaattgtggagatatcgtattacaacatgggccgt
atcagactgcagtggtcgagaatatgggaagtaattggggaccactttaataaggttggc
tgcaatcccaatgaagatgttgcaatttttgctgtagattctttaagacaattgtcaatg
aaattcttagaaaaaggagaacttgctaacttccgattccaaaaggatttcttacgacct
tttgaacatattatgaagagaaacaggtctccaacaattcgggatatggttgtgcgctgt
atagcacaaatggttaattcccaggctgctaacattcgctcaggatggaagaatatcttc
tctgtttttcacttagctgcctcagaccaggatgaaagcatagtggagcttgcgttccaa
acaacgggacacatagttaccatcgtctttgaaaaacacttcccagctaccatagattct
tttcaggatgcggtaaagtgcttgtcagagtttgcatgtaatgcagctttcccagatacc
agcatggaagcgatacgtcttatccgccattgtgcgaaatatgtgtctgacaggcctcag
gccttcaaggaatatacaagtgatgacatgaatgtagctcctgaagacagggtatgggtg
agaggatggtttccaattctctttgagttgtcctgcatcatcaacagatgcaaattagat
gtaagaaccagaggtcttacagtaatgtttgaagtaatgaaaacgtacggccatacctat
gaaaaacactggtggacggatttgttcaggattgtctttagaatttttgataacatgaag
cttccagagcagcagactgagaaagctgaatggatgacaaccacatgtaatcatgcactt
tacgcgatttgcgacgtgttcacccagtattttgaagttcttagcggtgtcctactggat
gacatattttcacagctctactggtgtgtgcagcaagataatgaacagctggctcgttct
ggaacaaactgtttagaaaacgttgtgattctaaacggtgaaaaattcaccttagaaatc
tgggacagaacttgcaattgcatgctaagtatatttaaaacaacaataccacatgcgctg
ctaacttggcaggcggctgttggagacaatgatatggtgtctcagtctgacatgagagaa
aaacagctggatactgtatctcagaaatctgtggacattcacgaaactgttcagctaaga
actgctgataacaggcggcaaactcaacccagtttaggatcgcctggcaatgagatgcag
caccttgtgaggcctacagcaaaacttccagaacagaaaatatttgctgcgctattgatt
aaatgtgttgtacagctggagcttatccagaccattgacaacattgtattcttcccagca
accagtaaaaaagaggatgctgagaatctggcagcagcacagagggatgctgcagacttt
gatttccatgtggacacacaagaccaaggaatgtactgctttctaacatcacagcagctg
ttcaaacttctggattgcttattggaatcgcataggtttgcgaaagcttttaactcgaac
aatgagcaaagaactgctttgtggaaggcgggttttaagggaaagtcaaaacctaacctt
ttgaaacaggagacgagtagccttgcctgtggcctacgtattcttttccgtatgtacatg
gacaaaagccgtgcaggggcgtgggaggaagttcagcagagactactgaatgtgtgcagt
gaagctcttagttacttcttgacactcacatcagaaagtcacagagaagcttggactaac
ctcttactgttattcctgacaaagattctgaagataagtgatgataggtttaaagcccat
gcatctttctactatcctctattgtgtgaaattatgcagtttgacttgattcctgaacta
cgggcagttcttcggaggtttttcctgcgcattggtggtgttttccagatctctcagcta
ccagaccaagagcttgccaccaacgagcagtag
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integrated database retrieval system
