Pleurodeles waltl (Iberian ribbed newt): 138282587
Help
Entry
138282587 CDS
T10800
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pwl04040
]
138282587 (TRPA1)
Ion channels [BR:
pwl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
138282587 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
138282587
NCBI-ProteinID:
XP_069076449
LinkDB
All DBs
Position
2_2:complement(738836619..739879550)
Genome browser
AA seq
1152 aa
AA seq
DB search
MRKSVKRIFSSAEAAKRQEMYHGLDMEVESSTPTPAKTVFELISDGDVHRVRSFIMKDPS
CLYSLDEVNATPLHYAAARGDIELMQMIVENASDEESKIHGSTSNYTNPRCQTSRNVSSK
LHPDTVSVLNVIDCKGNTPMHWAVESDQVESVRFLLCRGANPNILNCYLMSPLHNSIQFF
RNKLVEVLVNHISTDINLRGELGNTPVIQACAINNPEALEILFTKDALSCLKNQLGSYPI
HTAVMAASEKCLELVLKRGEEKGYSIYEHINFTDNLKNSPLHVAVRTGCLNIVKKCLAFG
AQIDQQETDKATPLHFAATQGATEIVKLMLTSYTGDKSIINIPDGNKETLLHKAALFDYA
DLAEYLISMGANLDILDKESRSPLLLAVTCSAWKTVNLLLSEGANVNIKDQCGRNFLHLT
VLQPGGFKHLNNDFLQLECVKALVSDEDYDGCTPLHYACRQGVPGSVNNLLGLNVSLYSQ
SKDKRSPLHFAACYGRINTCMRLLRDVKDARLLNGGDERGLTPLHLAAQNGHDKIVQMLL
KRGALLLSDYNGWTCLHHAAHGGYTRTMQTLLDTYLCVIDKVDINGNTALHLAAQEGHAK
AVKLLIDNGAAVLLNKESASFIHEAIRRGKKDVAFAAIQTDRLPEIMVTFSHRSHFKCPI
LEMIEHLPEAFTWLLDRCRTESAGDRRSLDFYIEYDFKYLQCPISIKKLSKEEAGITYEP
LISLNAMVRHNRMELLSHPVCKEYLLMKWMAYGFKAHILNLAVYSLGLIPLTLLILNCIN
PYASNSTLVHPPKPLQIKDSYFTRVCMSIVFGMSLFGLIKEIVQIIQQKVKYLMDATNII
DWTIHVTSIIFVSSLWKQSISIGHWQWQSGAMAVFASWVNFLLYLQRFESFGIYIVMFWE
ILRTLLRIVVLFFFLILAFGLSFFILLYPQTTFRSPYFSLMQTFSMMLGDVNYQDGFLHP
LIDDQMPYEVLSFIHLIMFTLLIPVLLMNLLIGLAVGDIAEVQRNAALKRIEMQVNLHTS
LEKKLPYWFLKRVDKTCITVYPNRPRFWGLAVKYDFLQFIFACEECTPEVPMTDTALEVE
LGKQKNRMKDMSSLLQKQHELIKLILQKMEIISEAEDEEEQDQQSCKVTKQALNRKESKW
NCVLKAVKVKAV
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaatcggtgaaaaggatcttcagctcggcggaggcggccaagcggcaagagatg
taccatgggctggacatggaggtcgagagcagcacaccgacccccgccaagaccgtcttt
gagttgatttcagatggagatgtacaccgggttcgaagcttcatcatgaaagaccccagc
tgtctttacagcttggatgaagtgaacgccacacctttacattatgctgctgcacgaggt
gatattgaattaatgcagatgattgtggaaaatgcttctgatgaagagtcaaagattcat
ggatccacttcaaactacaccaatccaagatgccagacttccagaaatgtttcaagcaag
ctccatccagacacagtttcagtgctcaatgttattgactgcaaagggaacacacccatg
cactgggcagtggagagtgaccaggtagagagtgttaggtttctcctatgcagaggagcc
aatccaaacattttgaattgctatctgatgtcacctctacacaactccatacagtttttt
cgcaacaaattggtggaggtgcttgttaatcacatctctactgatattaacctgagagga
gagcttgggaatacgccagttattcaagcatgtgcaatcaataaccccgaagccttagaa
attctgtttaccaaagatgctttaagttgcctaaaaaaccaactgggaagttaccctatc
cacacggcagtaatggctgcctccgagaaatgcctggagctcgtactgaagagaggggaa
gagaaaggatattctatttacgaacacataaactttactgacaatttgaagaatagcccg
cttcatgtagcagtccggacgggatgcttgaatattgtaaagaaatgcctagcttttggg
gcacagattgaccaacaagagactgacaaagccacacctctacatttcgcagcaacacaa
ggagcaactgagatcgtgaagctaatgctcacatcatacactggtgataagtcaatcatt
aatatccctgatggtaataaagaaacactacttcacaaggcagcattgtttgattacgca
gatctagcggagtatttgatatcaatgggtgcaaatttggacatcctcgacaaggagtct
cgatcaccacttctgttagctgttacatgttcagcatggaaaactgtgaatttactgctc
tctgaaggagcaaatgtaaacattaaagatcaatgtggaagaaattttctgcatttgact
gtattgcagcctggaggattcaaacacctaaataatgacttcttacagttagaatgcgtg
aaagcacttgtcagcgacgaagattatgacggctgcacacctctgcattatgcatgcaga
caaggagtgccaggctcagttaataacctgcttggtttgaatgtctccctgtactcccag
agtaaggataagcggtcacccctgcactttgctgcatgctatgggcggataaatacctgc
atgcgactgttgcgagatgtgaaagatgccagacttctgaatgggggagatgaaagggga
ttgactcctcttcacttggctgcacaaaatggacatgacaagattgtgcaaatgcttctg
aaaaggggtgctcttcttctgagtgactataacggatggacatgcttacatcatgctgcc
catggagggtacactcgcacaatgcagacacttctggacacatatttgtgtgtcattgac
aaggtcgacatcaatgggaacacagcgcttcatttagctgctcaagaaggacatgcaaaa
gcagtaaaacttcttattgacaatggtgctgctgtgcttctaaataaggagtctgcctct
ttcatacatgaagcaatacgtcgagggaaaaaggatgttgctttcgctgctattcagact
gacaggttgccagaaataatggtgacattttcccatcgttctcattttaaatgccctata
ctggagatgattgaacatcttcctgaagccttcacttggcttctggacagatgtaggaca
gaatctgcaggggacagaagaagccttgatttctatattgagtacgacttcaagtatcta
caatgtccaatttcaattaagaaattatcgaaagaagaggctggaatcacttatgagcca
cttatcagtctcaatgcaatggttcgtcacaacagaatggaacttctctctcatcctgtt
tgcaaagaatacttactcatgaagtggatggcctacgggttcaaagcacacattttgaac
ttagcagtgtattcattaggactcatcccgctgactcttttaattcttaactgcatcaat
ccatatgcaagtaactcaactttagtccatcctccaaagccattacaaataaaggattcc
tacttcacaagagtgtgcatgagcatcgtgtttggaatgagcctatttggacttattaaa
gaaatagtacaaatcatccaacagaaagtgaaatacctgatggatgccacaaatataatt
gactggacaatccatgttacaagcattatctttgtatcttctttgtggaaacaatccata
agtattggacattggcaatggcaaagcggagctatggctgtttttgcatcctgggttaat
tttctgctttaccttcagaggtttgagagttttggaatttacatagttatgttctgggag
attcttcggaccttgttgcggattgtagtgctgtttttcttcctcatcttggcctttgga
ctcagcttcttcattctcctatatccacagaccactttcagaagcccgtacttttcactg
atgcagaccttttcaatgatgctgggggatgttaactaccaggatggtttccttcatcca
ctgattgatgatcaaatgccgtatgaagtattatcatttattcatctcattatgttcaca
ttgctgattccagttcttctcatgaacctactcattggtctggcagttggagatattgct
gaagtgcaacgcaatgcagcactgaaaagaattgaaatgcaggtcaaccttcataccagc
ttagaaaaaaaactgccttattggtttctaaagagggtcgataagacttgcatcactgta
tatccaaacaggccaaggttctgggggctagcagtcaaatatgatttcctccagtttata
tttgcatgtgaggaatgtacaccagaggtgccaatgacagacacagctctagaggtagag
cttgggaagcaaaaaaacaggatgaaggatatgtcatctctacttcaaaaacaacatgaa
ctaattaaattgatcctgcagaaaatggaaataatttcagaggctgaagatgaagaagaa
caagatcagcaaagttgcaaggtcacgaaacaggcactgaaccgcaaagaaagcaaatgg
aactgtgtgttaaaagcagtaaaagtaaaagctgtttag
DBGET
integrated database retrieval system
