Pleurodeles waltl (Iberian ribbed newt): 138282701
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Entry
138282701 CDS
T10800
Symbol
POP1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
138282701 (POP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pwl03009
]
138282701 (POP1)
03016 Transfer RNA biogenesis [BR:
pwl03016
]
138282701 (POP1)
03029 Mitochondrial biogenesis [BR:
pwl03029
]
138282701 (POP1)
Enzymes [BR:
pwl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
138282701 (POP1)
Ribosome biogenesis [BR:
pwl03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
138282701 (POP1)
Transfer RNA biogenesis [BR:
pwl03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
138282701 (POP1)
Mitochondrial biogenesis [BR:
pwl03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
138282701 (POP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
138282701
NCBI-ProteinID:
XP_069076630
LinkDB
All DBs
Position
2_2:869746058..870033876
Genome browser
AA seq
959 aa
AA seq
DB search
MSNAKKKRYANKMRNQPSNVKFPSNDQADRSMQQHYKSGGESFRSQGTDFPTGLHDHKGL
ETPRYITATRFAEARAAEISVMLKTVSRKASNSQVFQSLPKHMRRRAMGHDVKRLPRRLR
EMAKKEMDKMMTQKKEQPKSKCRKARRRHGNLQQEFNRRQLKNIWLETHIWHAKRFHMVK
KWGYCLGDRPTMKSYRACFRAMTTHCLLQDLSYYCCLELVGKEEELLNSLAQLCSSETGP
TFAATQHLSGKREGSLVLYKKEKYPQEVIGPVTFIWKPKDIPASSSECRQLWIWAHPALK
QDVLGELQAVCDCTENTETMDSVGKKRKRMDEEGKIAVPMKKILGDGTRDPLLMYSWKSA
ATGITISDLTMDIVRYRLIGPLSHSVLAEALKAADVHTEMQTSKVDPHAWWSDYCKDFEN
ISLHNRQATTFQLLHAVRSPAEIPSGTVLGLTTGDPRLNLPAKRSKAVPDLTFQDQEKVR
QMTIEGAPVECARTFIWNQAVRDSVTENKIPEQKINRLRRELLVPGSKLELGPSESKIPV
LLIQQPGKVTGEERRGWGAGWDICLPKGWGMAFWISFIYRGARIGGLKEALHHSLCKGTP
YVPNDFPDCPAGAQAAKELEATLLEKYKRRPPAKRTNYVKHGSVAPFLCPWKKLTKDWEA
RHKVETEANVAKIQGSKSFEDEMPCSTSRTLLPEDSACVEMEIIQDSASSQAEGADQQSS
SFCVVRCRRLIKQLSYWCRFPSTQKGQKVHHSIKQEMTPGDTSPLISRYPRSLVWVRLSL
LKKGTPEMHSMICIPLQEDLVQLSRDKVYSGPQEPKHRDIFRHQVMKFKKMKRKLKISKR
KETGGAGSLEATSGNVEANSGSAEDNSKVENINEYEHLTLGLWPDSLPDVSSHCSRVVFG
FVTRGDFSLAVGCGEAVGFVSLTGLLHMLARQPANRKGLVLVRNPGSLQYRFAQIVIDI
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatgcgaagaaaaagagatatgcaaacaaaatgagaaaccagccttccaatgta
aagttcccatccaatgaccaagcagatcgcagcatgcagcagcattacaaaagtggagga
gaatcctttcggtcccagggtacagacttcccaactggcctgcatgatcacaagggtctg
gaaactcccagatatataaccgcaacaaggtttgctgaagcccgtgctgcggaaattagt
gtcatgttgaaaactgtctcccggaaggcatccaactctcaggtcttccagtctttacct
aaacacatgcgaagacgtgccatggggcatgatgtcaaacgtcttccacgacgcctgcgt
gagatggcaaagaaagagatggacaagatgatgactcaaaaaaaagaacagccaaaaagc
aaatgccgcaaagctcgaagacgtcatggaaacctgcaacaagagttcaaccgacggcaa
ctgaagaatatttggctagagactcatatctggcatgcaaagagattccacatggtgaag
aagtggggttactgcttgggagacagacctacgatgaagagttacagagcctgctttcga
gcaatgactactcattgccttcttcaggatctctcctattactgctgcctggagttggtt
ggaaaggaagaagagcttttgaattctcttgctcagttatgcagttcagagacagggcca
acatttgctgctacccaacatctgtctggaaagcgtgaaggttcccttgttctctacaaa
aaagaaaagtatccacaggaagtgattggccctgtcacattcatttggaagccaaaggat
atccctgcttcctcttcggaatgcagacagttatggatttgggcacatcctgctctgaaa
caggatgtgttgggagagctgcaagcagtttgtgattgcaccgagaacacagaaactatg
gatagtgttggcaaaaaaagaaagagaatggatgaagaagggaagatcgcagtaccaatg
aaaaagatcctaggcgacggcaccagagatccacttctgatgtacagctggaaatctgca
gccactggcattacaatcagtgacttgaccatggacattgtgagatatcgattaattgga
cctctctctcattctgtacttgctgaggcattgaaggctgctgatgttcacactgagatg
caaacttcgaaagtggaccctcatgcttggtggtcagattattgtaaggattttgaaaat
atttcgcttcataatcggcaagcaacaacgtttcagctgctccacgctgttagatcgcca
gcagaaattccatcaggcactgtccttggcttaacaacgggtgacccaagattgaattta
ccagcgaaaaggtcaaaagctgtgccagatttaacctttcaagaccaagagaaggtgaga
cagatgaccatagaaggtgcccctgttgagtgtgcgaggacctttatatggaaccaggct
gttcgggacagtgtcactgaaaataaaatcccagagcagaaaatcaatcgtttgaggaga
gagctcttggtgccaggatccaagcttgaactgggtccctctgaatccaagattccagtc
ctcctaattcaacagccaggaaaagtgactggagaagagcgcagaggatggggagctggc
tgggacatctgcctgcccaaaggctggggcatggcattttggatttcttttatatatcga
ggcgcccggattggtggcttaaaggaggctttgcatcactccctttgcaaaggaacacct
tacgtccctaatgacttccccgattgccctgctggagctcaggccgccaaggagctagag
gcgacgctcctggagaagtacaaaagacgaccacctgccaaaaggacaaattatgttaag
catggttctgttgcaccatttctttgtccatggaaaaaattaacaaaggactgggaagcc
cgccacaaagttgagacagaagctaatgtcgcaaaaatccagggaagcaaatccttcgaa
gatgaaatgccctgctccactagtcgaacccttctaccagaagacagtgcttgtgttgag
atggaaataattcaagatagtgcatcctcacaagctgaaggcgcagatcaacaaagtagc
tctttctgtgtagtccggtgcagaagattaataaagcagttgtcgtattggtgtcgcttc
ccttccacgcagaaaggtcaaaaggttcatcattccatcaagcaagagatgacacctgga
gatacatcgcctctcattagccggtacccgcgatcactcgtctgggtcagactctctctt
ctgaagaagggaaccccagaaatgcattctatgatttgcatcccgctgcaggaagatctg
gtgcagctcagcagagataaggtgtacagtggccctcaagaacccaaacacagagacata
tttaggcaccaggtcatgaaattcaagaaaatgaaaaggaagctaaagatcagcaaacgc
aaagaaactggtggtgctggtagcctggaagcgacatctggtaatgtggaggccaattct
ggctctgcagaggacaactcaaaggtagagaatatcaatgagtatgaacatctaactctt
ggcctgtggcctgactctcttcctgatgtttcttcccactgctctcgagttgtgtttgga
tttgtcacccgtggtgatttctcattggctgtgggttgtggtgaagcagttggatttgtc
agtctgacaggcttgctgcacatgctagccagacaacctgctaacaggaaaggacttgtt
ttagtaagaaatccaggatcattgcagtacaggtttgcacaaatagttattgatatttaa
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