Pleurodeles waltl (Iberian ribbed newt): 138282785
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Entry
138282785 CDS
T10800
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pwl00535
]
138282785 (COL14A1)
Proteoglycans [BR:
pwl00535
]
Extracellular matrix (ECM) proteoglycans
Others
138282785 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
vWA_SIBA-E
VWA_3
Motif
Other DBs
NCBI-GeneID:
138282785
NCBI-ProteinID:
XP_069076780
LinkDB
All DBs
Position
2_2:976036234..976479614
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AA seq
1882 aa
AA seq
DB search
MMQTRHRLRACFLLSFVAVITHFSTDVHGQVSAPTRLKYNVLSEDRIQISWKALKGKFEG
IKLLVTPKEGGKTNQLTLKASATRAIIDGLDPDQIYLVKVLAFNDNEESKQTHGQFRIRD
LVNKRNETAPKKLKVDETGRGNEGQPQENQFTCKTPAIADIVILVDGSWSIGRFNFRLVR
NFLEGLVSAFNVGSDKTRIGLAQYSGDPRIEWHLNAFNTKDAVVDAVRNLPYKGGNTLTG
LALTYILENSFKPEVGLRPGIPKIGILITDGKSQDDVIPPAKSLRDTGIELFAIGVKNAD
INELKEIGSEPHNTHVYNVADFNIMHTIVESLTKTVCTRVEEQEREIRGTSTATMGAPTN
LVTSEVTARGFRISWTHAPGKVEKYRVVFYPTRGGQPEEVVVDGTVSTAVLRNLMSLTEY
QLAVFAIYISAASEGLRGTETTLALPMASDLELYDVTHNSMRVKWNGVAGATGYMMLYAP
LTEGLTTDEKEMKVGELVTDVELSGLSPLTEYTVTVYSMFGEEASDPLTGQETTLPLMPP
RNLRFSNIGHSTAAATWDPPSKKVNGYRIMYVKTDGTDTNEVEVDRISTYLLEKLASLTE
YTVAIFSIYDEGQSEPLTGSFTTKKVPSPQVLNIHEISTDSFRAIWKPFSNDVVMYRLTW
IPLNGGKPEEIVLNGEVNDYLVDGLEQRTEYEVSLSAIFTDETESDAVAVLATTIARQTT
TTPATTTTTARQVTAVIRTGIRNLVIDDETTSSLHLKWQISDSNVRQYRVTYVSSRGDRG
EEVAIVPGRQNNLILQPLLSDMEYKISVTPIYSSGEGVTISTTGRTLPLSAPRNLKITDE
WYNRLRITWDAPKSPTMGYRIVYKPINVPGPALETFVGDDVNTILILNLLSGTEYNLKVF
ASYSTGFSDALTGVAKTLYLGVTNLETYQVRMTSMCAQWQIHRHATAYKIVMESLVDGKR
QESLIGGGTSRHCFYELRPNTEYKISVQAQLQEIEGPPVSVMSTTLPVPTAAPTLAPTTQ
APSTIPPAREVCKAAKADLVFLIDGSWSIGDDNFNKVIQFVYSTAGALDRIGTDGTQVGI
AQFSDDARTEFKLNSYENKETLLEAIQKIAYKGGNTKTGRAIKHVRDALFTVESGMRKAI
PRVLVVITDGRSQDDVNKVSKEMQLEGFSIFAIGVADADYGELVSIGSKPSARHVFFVDD
FDAFKKIEDELITFVCEAASATCPLSLIHGNSLAGFKMMDMFGLVEKEYSALDGVSMEPG
TFNSFPCYRLHKDSLVSQPTKYIHPEGLPSDYTITFLIRILPDTPQEPFALWEILNKAYE
PIVGVILDNGGKTLTFFNYDYKDEFQTVTFEGPEIGKIFYGSFHKIHVVISKTTSKIIID
CKQVGEKPINAAGNISTDGIEVLGRMVRSKGANERSAPFQLQMFDIVCTTSWGNRDKCCE
LPALRDEESCPTLPHSCSCSQDSKGPAGPVGPPGGPGIRGPKGQQGESGQTGPEGVRGEP
GSRGPQGPPGPQGPSGHSIQGPTGPAGEKGDKGDMGLPGQQGIPGGSGSPGRDGTQGPRG
VPGKDGSTGPPGPPGPMGGPGAPGAPGVPGTIGPQGDIGPTGSQGLKGERGERGDTQSQT
MVRAVARQVCEQLIQSHMARYSAVLNQIPSQSTSVRTIVGPPGEPGRQGSPGPQGEQGPP
GRSGFPGSPGQPGTPGERGLQGEKGEKGSQGVGTQGPRGPPGPAGPQGESRVGSPGPPGQ
PGQRGPPGHAGPPGSQGPSGAPGYCDPSSCGGYGVGGGYGDPTDQDNPVVQMPHSSYQVY
DPEDLYDIEQSPYLVPGPYGHPNPYVQQSFNQPELPQPEFTPVQEEMEETEVRSPGISRY
PRSISEKKRTVPLLQKRNKKES
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagacaagacacagactgcgggcctgcttccttctgtcctttgtagctgtgatc
acacatttctccacagatgtgcatggccaagtgtcagcaccaacaagattgaaatataat
gttttatcagaagacagaatccagatttcatggaaagccctgaaaggaaaatttgagggc
attaagcttctggttacaccgaaagaaggtgggaaaacaaaccaacttactctcaaagcg
agtgcaaccagggcaattattgacggccttgaccccgaccagatctatcttgtgaaagtt
ctggcatttaatgacaatgaggagagcaaacagacccacgggcagttccgaattagggat
ttggtaaacaaaagaaatgagacggctccaaagaaattgaaggttgatgaaacaggacga
gggaacgaaggccaaccacaagaaaaccagttcacgtgcaaaacgccggcaatcgccgat
attgttatcttggtggacggttcatggagcattgggagattcaacttcagactggttcga
aatttcttagaaggcctggtttctgcattcaatgtgggaagtgataaaacaagaattggt
cttgcgcagtacagcggcgaccctcgcatagaatggcacctgaatgcatttaatactaag
gatgctgtggtggatgcagtccggaatttaccttacaagggcggaaacacattaacaggt
ttggcattgacatatattttggaaaatagcttcaagcctgaagtaggcctgcggcctggg
atcccaaagatcggcattttgatcaccgatggcaaatctcaagatgacgtcatccctcct
gccaaaagtttacgtgacactggcatcgaattgtttgctattggtgtgaaaaatgctgac
ataaatgaactgaaggagatcgggtcagagcctcacaacacccatgtctataatgtggct
gatttcaacatcatgcacaccatcgtggagagcctgacaaaaaccgtgtgcacgagggtg
gaagaacaggagagggaaatacgaggaacatcgactgccaccatgggggcacctacaaac
ctggtcacatcggaagtgactgcaagaggatttcgaataagctggacacacgcaccagga
aaagtagagaaatacagagttgtattttatcccactcgaggagggcaaccagaggaggta
gtggtggatggaacagtgtctactgcagtcctaaggaacctcatgtcactcactgagtat
cagctggcagtgtttgcaatatatattagtgcggccagtgaaggccttcgtggtacagaa
acaacattggctttgccaatggcatctgaccttgagttgtatgatgtgacccacaacagc
atgcgggttaaatggaatggggtggcaggtgccactgggtacatgatgctttatgctcct
ttgaccgaaggtttgacaactgatgaaaaagagatgaaggttggagagcttgttacagac
gtcgagctatctggactgtcgcccctcacggaatataccgtcaccgtttactctatgttc
ggagaagaagcaagtgaccccctcacaggccaagaaaccacattgcctttgatgccaccc
agaaacctgagattttctaacatcggacacagcaccgccgctgccacttgggaccctcct
tcgaagaaagtcaatggttaccgtataatgtacgtgaagaccgacggaacagacaccaac
gaggttgaagtggatcgaatttcaacgtaccttctggagaaacttgcatcgctcacggaa
tacacagtggccattttttcaatctatgacgaaggccagtcagagccactgactggcagt
ttcactacaaagaaagttccatcccctcaggttctgaatatccatgaaatctcgaccgat
agcttcagagctatctggaaacccttctccaatgacgtagtgatgtacagactgacttgg
atccctctgaatggcgggaaaccggaggagattgtcttaaatggagaagtcaatgactat
ctcgtagatggacttgaacagaggacagaatacgaagtctctttgtcggccatttttact
gacgaaactgaaagtgatgctgttgctgttctcgcgactacaattgcaagacaaacaacg
actacacctgccaccactaccacgactgccaggcaggtgaccgcagtaatcaggacagga
ataagaaaccttgttattgatgatgaaacaacttcaagcctacacttaaaatggcagatt
tccgactcaaatgtacggcagtatcgagtgacctacgtatcatctaggggtgatcgcgga
gaagaagtggccatagttccaggaagacagaacaatctcatcctccaacctcttctgtca
gacatggagtacaaaatctcagtcacgccaatctattctagcggagaaggggtcactatt
tcaacaactggcagaaccttgccactgtctgctcctagaaacctgaagatcactgatgaa
tggtacaatagactgcggattacctgggatgcacctaaatctcctaccatgggctacagg
attgtttataagcctatcaatgtgcctggaccagctctggagacgtttgtgggagatgat
gttaacaccattctgatcctgaacctgctcagtggaactgagtacaaccttaaggtcttt
gcatcctactcgaccggcttcagtgatgcgctgacaggcgtagcgaagacgctatacctg
ggagtgacaaatctggaaacctatcaagtgcgtatgacgagcatgtgcgcacagtggcag
attcacagacatgcgacggcctataagatagtgatggaatcacttgtcgatgggaagcgg
caagagtcactcatcgggggaggaacctcaagacactgcttctatgaactcagacctaac
actgaatataaaatctctgttcaggctcagctacaggagatcgaggggcccccagtgagc
gtcatgtcaaccacattaccagttccaactgctgcaccaacgctagccccaacgactcaa
gcgccatctacgattcctcctgcacgagaggtttgcaaagccgcaaaagctgacctggtt
ttcctgattgacggatcctggagcattggggatgacaacttcaacaaagttattcagttt
gtctacagtacagcaggagcactggaccggataggcactgatggaactcaagttggtatt
gctcagttcagtgatgatgccaggacagagttcaagctcaactcatatgaaaataaggaa
accctccttgaggccattcagaaaattgcatacaagggcggaaataccaaaactggcagg
gcaattaagcatgttcgagatgccttatttactgttgagtcaggcatgagaaaagccatc
cccagggtgctggtggtcatcactgatggccggtcgcaggatgatgtcaacaaggtctcc
aaagagatgcaactagaaggtttcagtattttcgccattggtgtagcagatgccgactac
ggtgagctggtgagcatcggcagcaagcccagcgcgagacatgtcttctttgtcgatgac
tttgacgcctttaagaagatagaagatgaactaattacgtttgtgtgtgaggccgcatct
gcaacttgtccattgtctctaattcacggcaacagcttggcaggttttaaaatgatggac
atgtttgggttggttgaaaaagagtattcagcactggatggagtttcgatggaacctggt
accttcaacagctttccatgctaccgactccataaggattccttggtttctcagccaacc
aagtatatccacccggaggggctgccttcagattacaccataaccttcctcattcggata
cttccggacacgccccaggaaccctttgcattgtgggagattttaaacaaagcctatgag
ccaattgttggggttattttagacaatggaggaaaaacactgacattttttaactacgac
tacaaagacgaatttcaaactgtgacgttcgaaggacctgagataggaaagattttctac
ggaagttttcataaaatacatgtggttatcagcaagactacctcgaaaatcatcatagac
tgcaagcaggttggtgagaaaccaatcaacgcagccggcaacatcagcacggatggcatt
gaggtgctggggagaatggttcgatccaagggcgcgaatgagcgctctgctccattccag
ctccagatgtttgatattgtctgtaccacttcctgggggaacagagacaagtgctgtgaa
cttccagctctgagggatgaagaaagctgcccgacgctgcctcattcttgctcctgttct
caggatagtaaagggccagcgggacctgtcggaccaccaggtgggcctggtatccggggt
ccaaagggccagcaaggagagtctggtcagacaggaccagaaggagtacgtggagaacca
ggctcaagaggaccacaaggacctcctgggcctcagggtccaagcgggcattcgatccag
gggcccactggaccagcaggggaaaaaggagacaagggagatatgggtcttcccggccaa
cagggcattccaggagggtcgggatcgcctggacgggatgggacccaaggccccagggga
gtgcctggcaaggacggatccaccggcccaccgggccctcctggaccaatgggtggccct
ggagccccgggggccccaggagtcccaggaacaattggaccacaaggtgacattgggcca
acgggttctcaaggtttaaagggagaaagaggtgaaagaggagacactcaatcccaaacc
atggtgcgtgcagttgctcgacaggtgtgtgagcagctcatacaaagtcatatggctagg
tacagtgctgttcttaaccaaatacctagtcagtccacatcagtgcgcaccatcgtggga
ccgcctggagagccgggccggcagggatctcctggtccacaaggtgagcaaggaccacca
ggaagatcaggattcccaggcagtccaggacaaccaggaacaccaggagaaagaggcttg
caaggtgaaaagggagaaaagggcagccagggtgttggaacacaaggtcccagagggccg
cccggcccagcaggacctcaaggtgagagtcgagtaggaagtcctggcccccctggccaa
ccaggacagagaggtccacctggacatgcaggacctcctggttcacagggtccttctggc
gcacctggatactgtgacccttcctcttgtggtggctatggtgttggaggtggatacggt
gatccaacggatcaagacaaccctgtagtacaaatgccgcattcttcctaccaagtatat
gatccagaggacctttacgacattgagcagagtccatacctagttcctggaccttatggt
cacccgaatccatacgttcaacagtccttcaatcagcctgaactccctcagcccgagttc
actccagtacaggaggaaatggaagagacagaagtgaggtcgccgggcattagccgatac
cccaggagcatatcagaaaaaaaacggacagtgcctttgctacaaaagaggaataaaaag
gaatcttaa
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