Pleurodeles waltl (Iberian ribbed newt): 138282936
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Entry
138282936 CDS
T10800
Symbol
SKP2
Name
(RefSeq) S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04068
FoxO signaling pathway
pwl04110
Cell cycle
pwl04120
Ubiquitin mediated proteolysis
pwl04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138282936 (SKP2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
138282936 (SKP2)
04150 mTOR signaling pathway
138282936 (SKP2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
138282936 (SKP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138282936 (SKP2)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
138282936 (SKP2)
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
LRR_NXF1-5
LRR_R13L1-DRL21
LRR_4
F-box_5
Motif
Other DBs
NCBI-GeneID:
138282936
NCBI-ProteinID:
XP_069077104
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Position
1_1:213546220..213608244
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AA seq
420 aa
AA seq
DB search
MQRRHLQDISASSSNITNFTWAWDSSKTTELLTGMGVSLIDKEQLDTENTPQEQILCSSP
PQKRKRLAEKDSDQCFVIARRPRQIREISRGVSWEALPDELFLSIFSYLPLTTLLKVSRV
CKRWHRLSFDESLWHSLDLTGKSLLPGAIGQVLSAGIVAFRCPRACVAEPLFKNFSPLRI
QHMDLSNCTISVAALHSILCRCHKMQNLSLEGLVLSDEILRSIAQNTDLVRLNLSGCSGF
SAETLEEVLIKCSRLEELNVSWCDFTADHIKALMNHIPPSVTQLNVSGYRQNLQIADIKS
LVERCPNITNLDLSDSVMLTSECFPDFHQLSYLSNLSLSRCYQISPATLLELGKLPTLKT
LCVFGIVTDSSLQLLKETLPHLSINCTHFTTIARPTVGNKRNRDIWGVKCRLTFRQNDGL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagacgacatcttcaggatatttctgcttccagcagcaacattaccaactttaca
tgggcctgggattcaagcaagacaacagagctgctcactgggatgggggtgtcacttatc
gacaaggagcagctggacacagaaaacacaccccaggagcagatcctgtgttcatcacca
cctcagaaaaggaagcgccttgctgaaaaggatagtgatcagtgctttgtgattgcacgg
aggcccaggcagatccgggagataagtcgtggggtctcttgggaagcgctccctgatgag
cttttcctcagcattttttcctacttaccgctgactacccttctgaaagtttcacgggtc
tgcaaaaggtggcatcgtctctcgtttgatgagtcactttggcacagtctcgatctgact
ggtaaaagcctacttccaggagctattggtcaggtgctttctgctggcattgttgctttt
cgttgcccacgagcctgtgttgcagagccattgtttaaaaacttcagccctctgcgcatt
caacacatggatctttctaactgcacaataagtgtcgctgctctgcacagtatcctttgc
cgttgtcataaaatgcaaaacctgagcttggagggactggtgctgtctgatgaaattcta
cgatcaatcgcacagaatactgatctggttcgtttaaacctttctggttgttctggtttc
tctgcggaaacactggaggaggtgctaatcaaatgttctcggttggaagagctaaacgta
tcttggtgcgacttcactgcagatcacattaaagccttgatgaaccacattcctccaagc
gtgacacagctaaatgtcagcggatatagacaaaatctgcagatagctgatatcaagtcg
ttggttgagcgctgtcctaatatcaccaacttggatctaagcgacagcgtaatgctgaca
tcagagtgttttccagactttcaccagctctcttacctcagtaacctgtcgctcagtcga
tgttaccagatttcacctgccacgttacttgaacttggaaaacttcccacattaaagaca
ctctgtgtctttggaattgtgactgacagctcactccagctcctcaaagaaacactgcct
cacctgagtataaactgcacccattttactaccattgcaagaccaactgtgggcaacaaa
aggaaccgggacatctggggtgtgaaatgcaggctgacatttcgacaaaatgatggcttg
tga
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