Pleurodeles waltl (Iberian ribbed newt): 138283594
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Entry
138283594 CDS
T10800
Symbol
SPOPL
Name
(RefSeq) speckle-type POZ protein-like
KO
K10523
speckle-type POZ protein
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
138283594 (SPOPL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138283594 (SPOPL)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
138283594 (SPOPL)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_KLHL33
DUF5572
BTB_2
BACK
TRAF-mep_MATH
Motif
Other DBs
NCBI-GeneID:
138283594
NCBI-ProteinID:
XP_069077633
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Position
3_1:1482491200..1482905682
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AA seq
377 aa
AA seq
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MVPTHFSSPKTFGGHVAENWCCTQVKVMKVSNVWTINNFSFCRDEMGAPIKSSSFSSSLN
DKIKWCLRIYPKGCGDDESKDYLSVYLLLLSCPKTEVRAKFRFSLINAKGEETKEMESQR
AYRFVQGKDWGFKKFIRHDVLVDEAHELLPSDKLTLFCEVRVILDSLKLSGRSNNSFNVP
ECKLADDLGDLWETSRFADCTLYVGGQEFKSHKSILAARSPVFNAMFEHEMEESRKNRVH
IKDIDPDVFKELMGFIYTGKSPPNLKEIADSLLAAADKYALDRLKVMCEEALSNNFTIEN
VAAFLVLADLHSAMQLKARAIDYISRHATEIMETVGWKSMIQSHPHLVADAFRALSSVQS
SKYGIPRKRLKPSPTLP
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggtgccaacacatttctcttctccaaagacatttggtggacatgtggctgaaaattgg
tgttgcacacaggtaaaagtgatgaaggtgtcaaacgtgtggaccataaacaacttcagc
ttttgccgggacgaaatgggagcacctatcaaaagttcatcattttcatctagtttaaac
gataaaataaaatggtgtctgagaatatatccaaagggatgtggtgatgatgaaagtaaa
gactacctgtcagtttatttactcctgctgagctgtccaaaaacggaagtcagagcaaaa
ttcagattttcacttattaatgctaaaggagaagaaacaaaagaaatggaaagccaaagg
gcatatcgatttgtgcaaggcaaagactggggttttaaaaaattcattcgacatgatgtt
ttggttgatgaagctcatgaacttttgcctagtgacaaacttacactcttctgtgaggta
agggtgatacttgactctttgaagctctcaggaaggtcaaacaacagtttcaatgtacct
gaatgtaaactggcagatgatttaggagatctctgggaaacatcaagatttgcagactgc
actctatatgtaggagggcaagaatttaagtcgcataaatccattctagcagcacggtct
ccagtttttaatgcaatgtttgagcatgaaatggaggaaagcagaaagaacagagtacat
ataaaagatatcgatccagatgtgtttaaagaattgatgggattcatttacacaggaaaa
tcgccaccaaatcttaaagaaatcgcagacagcttgttagctgcagccgacaagtatgca
ctcgatcgtctaaaagtcatgtgcgaagaagctttgagtaataacttcacaatagaaaat
gttgctgcctttcttgtactcgcagatttgcacagcgcaatgcagctgaaagcacgagca
attgactacatcagtcgacatgcaactgaaataatggaaactgtgggatggaagtcaatg
atccagtcacacccacatttggttgcagatgccttcagggcgttatcttctgtacagtct
tcaaagtatggaataccacggaaacggctaaaaccatcccccaccctaccatga
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