Pleurodeles waltl (Iberian ribbed newt): 138283754
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Entry
138283754 CDS
T10800
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
138283754 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pwl04515
]
138283754 (LRRC4C)
Cell adhesion molecules [BR:
pwl04515
]
Immunoglobulin superfamily
NGL family
138283754 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_14
V-set
LRR_9
Ig_2
LRRNT
LRR_NXF1-5
LRR_LRWD1
Ig_6
Sp38
DUF7617
Herpes_gE_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
138283754
NCBI-ProteinID:
XP_069077913
LinkDB
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Position
3_1:49080163..52211258
Genome browser
AA seq
637 aa
AA seq
DB search
MLNKMTLHPQQMMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICTRRNLREVPDGISTNTRLLNLHENQIQIIKVDNFKHLRHLEILQLSRNHIRTIEIGAF
NNLANLLTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
EMRRLSYISEGAFEGLSNLRYLNLATCNLREIPNLTPLVKLDELDLSGNHLTVLRPGSFQ
GLTHLQKLWMMHSQIQIIERNTFDDLQSLLELNLAHNNLTLLPHDLFTPLHHLQRIQLHH
NPWNCNCDILWLSWWLKEIVTTGSTCCARCSTPNNLKGRHIAELDQNFFTCYAPVILEPP
ADLNVTEGMAAELKCRASTSLTSVSWITPNGTIMTHGAYKVRISVLNDGTLNFTNVSARD
TGLYTCMVSNSAGNTTASATLNVTATDTNYTYFSTVTVETMEPTQEETEATEHKVGPTPV
IIWETTNVTTSLTPQSTKATDKTFTIPITESSIPGIDEVMKTTKIIIGCFVAITLMAAVM
LVIFYKMRKQHHRKNHHAPTRTVEIINVDDELRGGSPIESHLPMPAIEHEHLNHYNSYKS
PFNHTTTVNTINSIHSSVHEPLLIRASSKDNVQETQI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgacattacatccacagcagatgatgataggtcctaggttcaacagg
gccctgtttgaccccctgcttgttgtgctgttggctcttcagcttcttgtggtagctggc
ttagtccgagctcagacttgcccttcggtctgctcttgcagtaaccagttcagcaaagtg
atctgcacacggagaaacctgcgtgaggtgcctgacggcatatccaccaatacacggctc
ctcaacttgcatgaaaaccagatccaaattatcaaggtggacaacttcaaacacctgaga
cacttggagatcctacaactgagcagaaaccacatcaggactattgaaattggggctttt
aataatctggccaacctccttactttagaactctttgacaaccgtctcaccaccatccca
aatggggcttttgagtacctctcaaaactaaaagagctctggctgaggaacaatcccatt
gagagtattccttcttatgcttttaaccgaatcccttctttacgtcggttggatttggga
gagatgagacgactctcctatatctcagaaggtgcctttgaaggcctctcaaacctgagg
tacttgaaccttgcaacgtgcaacctccgagagatccccaatctcacccccctagttaaa
cttgatgaactggacctgtcggggaaccatttgactgtgctgaggccaggctcctttcaa
gggctgacccacctccaaaagctctggatgatgcattcacaaatccaaattattgaacgg
aacacgtttgatgaccttcagtcccttctggagcttaacctggcccataacaatttaact
ctgctgcctcatgaccttttcacccccctccaccacttgcagaggattcaactgcatcac
aatccatggaactgcaattgtgatattctctggctgagctggtggcttaaggagattgtg
accactggcagcacttgctgtgcacgctgtagcacacctaataatttgaaaggacgacac
attgcagagctggaccagaattttttcacatgctatgctcctgtgattttggaacctcct
gcagaccttaatgtcacagaaggcatggcagcagagctgaaatgccgagcatccacatcg
ttgacctctgtaagctggatcaccccaaatggaacaattatgacccacggggcatacaaa
gtgagaatttctgtgctcaatgatggcacactaaactttaccaatgtgagtgcaagggac
acaggcttgtacacatgtatggtgagtaactctgctgggaacaccacagcttcagccact
ctgaatgtgacagccacagacactaactacacatacttttccacagtcaccgtagagaca
atggagcccactcaggaggagacagaggctacagaacataaagtggggcccacacctgtc
attatctgggagaccaccaatgttaccacgtctctcacgccccagagcacaaaggcaact
gacaaaacatttaccatcccaatcacggagtcaagcatccctggaatagatgaggttatg
aagacaaccaaaattatcattggttgttttgtggccatcactctcatggcagcagttatg
cttgtcatcttctacaagatgaggaagcagcatcaccgaaagaaccatcatgcccccacg
cggactgttgagatcatcaatgtggatgatgagctcagagggggatctccaatagaaagc
cacttgcccatgcccgccattgagcacgagcatcttaaccactacaactcttacaaatcc
cctttcaaccacacaacaacagtgaacacaattaattcaatacacagttccgtgcatgaa
ccgttattgattcgagcgagttcgaaagacaatgtacaagagactcagatataa
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