Pleurodeles waltl (Iberian ribbed newt): 138283928
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Entry
138283928 CDS
T10800
Symbol
NEIL1
Name
(RefSeq) endonuclease 8-like 1 isoform X1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
138283928 (NEIL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwl03400
]
138283928 (NEIL1)
Enzymes [BR:
pwl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
138283928 (NEIL1)
DNA repair and recombination proteins [BR:
pwl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
138283928 (NEIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
138283928
NCBI-ProteinID:
XP_069078260
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All DBs
Position
3_1:complement(193277483..193395914)
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AA seq
632 aa
AA seq
DB search
MPEGPELHLAARYVNSVCEGVIFSGQVEKSEVSKNPEVPFSSQGYRITATARGKEVKLSL
TPIKWEAKSPMKGHAKQCLKTTEKEEPMDLVFRFGMSGTFRFTPADDVPKHAHLRFYTAE
PPRNALCFVDTRRFGSWEVNGTWQPDRGPCIMLEYEQFRENVMKNLQDKAFDKPICEALL
NQKYFNGIGNYLRAEILFRLKIPLFVMARTVLESLANPVQQSDLTLSKKLKLKKENPDLL
ELCHLVPMEVMNLPGKGYGSKYSDDYSAFGKWLQCYYVAGMKSLRDSNGRTIWFEGDPGP
LAPKGEKKNKKRRTLIKADPDTKLVKVTTPKRKQKSQSSGSQEESIGANEGMQKMMVRKK
AVLGAKKLSNSADKKRKGSLQDSITPQTRGRIQRPRRGSKSDAVKGSTKNSPLVKEVRTR
KLSKGGGPAAHIVETSKNSQQEKRRSRQQLKKQGESSSLIKNLPKDSQMQKGRKRQAKKE
GEQTPLTEEPPKNSQQETRITPKKQDLSARLSKTPPKGSRALKGQARQLKKKGEPVSLTE
VSTEDSHFKEAAAHQPKKEEDPAPINGNSLEDSPPLDGGKQQLKNDTAVAPLTDDLLENS
SLAKGRRSKTSARKRAGSPIGIRMITRQLKVE
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaggtccagagctgcacttagctgcacgctacgttaattccgtgtgtgaaggg
gtcatcttttcgggacaagtggagaaatccgaggtaagcaagaaccctgaggtgcccttt
tccagtcagggctaccggattaccgccacagcccgtggcaaagaagtgaagctaagcctg
acacccatcaagtgggaggcaaaaagccccatgaaaggacatgcaaagcagtgcctgaag
accactgaaaaggaagaaccgatggacttagttttccgctttgggatgtctggcaccttc
agattcactccggcagatgacgtccccaagcatgcccatctgcgcttctacacagcagag
ccaccacgcaatgcactttgctttgtagacacccgacgttttggaagctgggaagtgaat
gggacatggcagccagaccggggaccttgcataatgcttgaatatgagcaattcagggag
aacgtaatgaagaaccttcaggacaaggcgtttgataagcccatctgcgaagctctactt
aaccaaaagtatttcaacggcattggaaactacctgcgtgcggagatcctgtttagattg
aagatcccactctttgttatggctcggacagtactagaatcactggcgaatcctgtgcag
cagtccgatctgacgttgagcaagaagcttaagttaaagaaagagaatcctgacctgctg
gaactctgccatttggtgccaatggaggtcatgaacctaccagggaaaggctacggttcg
aagtattcagatgattattctgcttttgggaagtggctgcaatgttattatgttgctggg
atgaagtcgctgcgggacagcaatggcagaaccatatggttcgagggtgatcctggacct
ttggccccaaaaggagaaaagaaaaacaagaagagaaggactcttataaaagcagatcct
gatactaaacttgtaaaggtgaccaccccaaagaggaagcagaaatcgcaaagcagtggg
agtcaggaggagagcataggagcaaacgaggggatgcagaaaatgatggttcgaaaaaag
gcagttttgggagcgaagaagctatcaaattctgcagataagaagagaaaaggatctttg
caggactcaatcaccccacaaacaagaggacggattcagcgccccagaaggggatcaaaa
agtgatgcagtcaaaggctctacaaagaatagtccactggtgaaagaagtgagaacgcgg
aaacttagcaaaggaggaggtcctgctgcacatattgtagagacttcaaagaattcccag
caggagaaaaggagatcacggcagcagctgaagaagcaaggagagtcttcttcactcatc
aaaaaccttccaaaagattcccagatgcaaaaggggagaaagaggcaagcaaaaaaggag
ggtgagcaaactccacttactgaagaacctcctaagaattcccagcaggagacaaggata
acaccaaagaagcaggacttgtctgcacgactctctaaaacccctccaaagggttcccgg
gctctgaaggggcaagcaaggcagctgaagaagaaaggagagccagtttccctcactgaa
gtctctacagaggattcccatttcaaagaagcagctgctcatcaaccaaaaaaagaagaa
gaccctgcaccaatcaatggaaactccttagaggattcaccaccgctagatggggggaaa
cagcagctaaagaatgacactgcggtggctccactcactgacgatctgttggagaattcc
tcactggcaaaagggagaagatccaaaaccagtgcacgaaagagggcagggtctcccatt
ggaattcgcatgatcaccagacaactcaaagttgagtaa
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