Pleurodeles waltl (Iberian ribbed newt): 138283936
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Entry
138283936 CDS
T10800
Symbol
CSPG4
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
Proteoglycans [BR:
pwl00535
]
Cell surface proteoglycans
Others
138283936 (CSPG4)
Lectins [BR:
pwl04091
]
C-Type lectins
Others
138283936 (CSPG4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138283936
NCBI-ProteinID:
XP_069078279
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Position
3_1:complement(196194690..196508324)
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AA seq
2376 aa
AA seq
DB search
MKSAPAFPPLLLALLLALGANAGPGPGASFFGNSYMEVPVAEAYDEVTLHMQFHTGRPEG
LLFLAAGDSDYLLVELRDGAVQVRMDFGSGDVQVNSPEGLKLDNLVTHEFELKVSNGKMT
LLTDSLSNITAEIPGPWQELNVHHGIYIGGSGDLELPYLTEASIPFRGCLHSTIFNNIDL
LSLLTSNSGSRTVHEVKDGCSREFSAGRDEPFSFSGPRSFIAFPSWNARENVVIEFRMMS
TMEQAPLIFQSGTQHDFLYLEIINGYLRGTVNSRKGAVKLQNNIYVNDDQPHDIRIYIDA
HTFEISVDNFETRTSKTGMPSFLRPQENLLLGGFDEETLDILRESLAGYNLRDDRTYKSF
VGCIEELRINLEKKSLQDALVTKDVMAGCENEDYEDEYDYYDAPTTVAPTSTPSMWQGLR
LPIIEPCHLETGLPIIFQNFTKLLKISPLVLREGGTSILESRHIQPTIDLSAIGIRPSQV
VFSVTHDARYGFLELDVPGASTRKKFTLLDLMKHKVKYVHDGSEGSMDQLAFEVTINAKV
MIPECLRKGQVYLFPISITPTNDPPQVVFPHGNILMVLEHTRNVLNSDIINVIDADTPCD
SLKILIASGKSMERGYVENDYQPGQAIEEFSCNELKASSVAFVHRGELAQELHLQASDGF
SRGSTSTLFIIAKEPEIIVSNNTGLIISQGDTTAITTTNLSVETNAVKQKVDIFYRLTEP
LKFGELRKKGSTGEWKSVETFQQQDIDNEQIKYFSTDAEHHQKDITESIEFEVQVGKKIL
SNNFFFIEVKKSLIKLLNMAPLELKRSRQRNITARELQAVLEGQSLDAASYQYVILQAPR
KGNLMLEGQRLTEGLSFTQENLLRNSVTYEASVRNPKETEDNFQFRIYVTSHVSPVFTYK
IKIGADPHAPMLTNVLLSVPEGGEVIITSDHLFVKSSISMNYLYEVIEGPQHGRLFRRSP
PRQLSSNEALTEFSNDDLLQGRVVYQHDGSETTEDDIPFVAIRQIEGSAEALYFDRDVEE
VRGVFRVSIQPVNDNVPVQVVNKVFNVVRGGQRLLTTSDIAFTDKDSGSTDAQLVMVRRG
VPFGKIVFIEDTAHQVFRFTQEDLRKKKVLFVHSGADHGWFQLQVSDGLHQVTALVEVQA
SDPYIEIVNNTGLLVHQGGEKVLDDSVLRLETNMDIRNEEDVSFRIITPPTEGAIRKGEQ
QVSSFSQKDFLSGDIIYYHNGSTNARDFFEFSVEANQVLVEDNVEITVVLEGGNPPQVIH
NEKIYVFQGEAAEIKKEDLMVSDENSFPHEIVYIVRSPPRLGVLVTVSHSDTSDGSLNNI
QAFTQEEINAGSVLYLSSKPEPGSDPFILDVSNGAKVLEGLVVQLEVLPMTVPFRVQNIT
VEEGGTRVLSTDVLQIPSSYFTNLNLEFTVMEPPMHGAIRNAERHGGESLLSFTWNEVEQ
QLILYEHDDTETKIDAFTLAANVSEIDRQSRPATIRVDIRPVNDESPVLTVNAGLQIWEG
ATTAITAEVLSSIDKDSPPEEVVYTIQPPASGKVLLRSSSGNKETMTFTQAQVDEGLIVY
LHQGSPDGGFAFDISDGDNVSPGHFFTVTAKSLVITMEAKKDLVVCPGFSQPITNQTLRA
ATNTEVPLSSPLLYSVVEPPRLGQLVKIWLSSNDTGLTTFSQDEVDAGKIFYQHTMPLVP
FWISQDAFSFRVSSSNATTELQTLQVNISFEAGCHHRSHLWVNKGLSVGKHQRAAINTSS
LDASNLLARLPESNRSIYDVVFLLSEFPSHGQLSLADGPIMEKRPYFFQSDLHSGGLEYV
HNSSETQEDSFKFTPWIWPSGQVFSEAPQEPGALIISESFNITVREVYEHPPVLLTQSPS
LQVLQGSTVTLTTEHLNVMDLDSTPDKIEYTIIKRPTSGFLAHSDNSAVPIVQFTQKDVN
EGRLIFIVTGSSATDAFSLSISDGYHQAIHTFLTVNVLPAVLTVTNKKPVEIRQDQKQTT
LTQDHLLAVSDVVQQNILYRITRAPQFGQLRVNRKVVQEFSQKQVDKGEVSFIFTDLSSS
RDEFLFVATSGGANATGVVLISVKPLVSIQRGIILPRGTTVLMDTHILDASELANKTNSV
PTFKVLRAPRSSQFVKVMKGGKTRPMSADIFTQSDLEQGLIGLEVLEVEKGGQPVQNDSF
QVELAAKGVPPASATLKFTTRIYDPSFPYQATLLQFPLGPQAPETSSALYVDSYTMTLAP
WHVTEDSLIANSSGAGISPTVPHSESPTNPPPMQRASFLSFIEANMFTIILPVCLIILLS
VLGLLLLYYLIRRNKTGKHHVQGTAFKTKNGSVDQETFRKTDPNQAIPLSTMKPLESTVP
ESPTPRPMETGGQADPELLQSCRTSNPGLKNNQYWV
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctgcaccggccttcccgccgctactcctggccctgctcctggccctgggggct
aacgcagggccgggccctggagcttcttttttcggaaacagttacatggaggtccctgtg
gcggaagcctatgatgaagtcaccctccacatgcagttccacaccgggaggccggagggg
ctcctcttcctggctgctggtgactcagactatctcctggtcgaactacgagatggcgct
gtccaggtcagaatggatttcggatcaggtgatgtgcaagtgaattctccagaaggactg
aagcttgataacctggtgacacacgagtttgagctcaaagtcagcaatggaaagatgacc
cttctcactgacagtctctcaaacatcactgctgagatcccagggccctggcaggagctc
aacgttcatcatggcatttacattggtggctcaggggacttggaacttccctacctcact
gaagctagtataccattcagagggtgcctccacagcaccatatttaacaatattgacctc
ctctctttgctgacatctaacagtggctcaagaacagtgcatgaggtcaaagatggttgc
agccgcgagttttcagcgggccgggatgaacctttcagcttctctgggccacggtctttc
attgcattccctagctggaacgctagagagaatgtggtaattgagtttcgaatgatgtca
actatggagcaggctccactgatcttccagtcaggaactcagcatgactttctgtaccta
gaaatcatcaacggttatttgcgtggcactgtgaatagtaggaaaggtgcagtgaagcta
caaaataacatttatgtcaatgatgaccagccacacgatatcagaatctacattgatgcc
cacacatttgaaatcagtgtggataactttgagaccagaacatctaaaactggcatgcct
agcttcctgcgtccacaggagaatctcttgctgggagggtttgatgaagaaactttggac
attttaagggaaagcctggcaggttacaatttgagagatgacagaacctacaaatctttt
gttggctgcatagaagaactgaggatcaacttggagaagaaaagccttcaggatgccctt
gtcacaaaggatgttatggccggttgcgaaaatgaagactatgaagatgagtatgattac
tacgatgcaccaacaactgtggcacccacttccaccccatcgatgtggcaaggtctccgt
ctacctataatagaaccatgccacctggagactggcctacccataatcttccaaaacttc
acaaaattgcttaaaataagccctttggtactacgggaaggaggcacctcaattctagaa
tcaaggcatatacagccaaccatagacctcagtgcgattggtatcagaccttctcaggtc
gtcttcagtgtcactcatgatgcaaggtatggatttcttgaactagatgttccaggtgct
agcacaagaaagaagttcacactcctggacttaatgaaacacaaagtgaagtacgtccat
gatggctcagagggttccatggatcaactggcatttgaggtcaccatcaatgcgaaggtc
atgattcctgagtgtttgcgcaaaggtcaagtctatttgtttcccatatcaatcacaccc
accaacgaccctcctcaggtggtttttccacatggaaacattctcatggtactagaacac
acacgcaatgtgctgaactcagatattatcaatgttattgatgctgacacaccttgtgac
agcttgaagattttaatagccagtggcaagagtatggaacggggctatgtggaaaatgac
tatcaaccagggcaggccattgaagaattctcttgtaatgagttaaaggcaagtagcgtg
gcctttgttcaccggggtgaactagctcaagagctccacctccaagctagtgatgggttt
tcaagggggtcaacatccaccttatttattattgccaaagagcctgaaattattgttagc
aacaacacaggactaataatttcacaaggtgatacaactgcaattactaccacaaatctt
tcagtggaaaccaatgcagtgaagcagaaggtggatattttctatcgactcactgaacct
ctaaagtttggggagcttcgtaagaaaggaagtactggtgagtggaagtcagtggaaact
ttccagcagcaagacatagacaatgagcaaattaagtacttcagcaccgatgcagagcac
catcaaaaagacatcactgagagtatagaatttgaagtccaagttggcaagaaaatcctg
agcaacaacttcttctttattgaagttaaaaagtcgctgataaaattgctaaacatggct
ccattagaactgaaaagaagtcgccagaggaatatcactgctcgtgaattacaggctgtg
ttggaagggcaaagtcttgatgctgcatcctaccaatatgtaatactgcaagctcccaga
aagggaaaccttatgcttgagggccagagactgactgaaggcctcagtttcacccaagag
aatctgttgcgaaatagcgtgacctatgaagcaagtgtgaggaaccctaaagaaacagag
gacaatttccaattcaggatctatgtcaccagccatgtatcaccagtgttcacctacaaa
atcaaaattggggcagacccacatgcacccatgctaactaatgttcttctttctgtccct
gaaggaggagaagtcatcatcacttcagaccacctctttgtcaagagttccatcagcatg
aattacctgtatgaggtaatagaaggtcctcagcatggaagactattcaggaggtcaccc
cccagacaactttcaagcaatgaggcactaactgaattctccaatgatgaccttctccag
ggtagagtggtatatcagcatgatgggtcagaaaccacggaggatgatatacccttcgtg
gccatcagacagattgagggcagtgctgaggctctctatttcgatcgagatgtggaagag
gtgagaggtgtgttcagagtttccatccaaccagtaaatgataatgttccagttcaagtc
gtgaacaaggtcttcaatgtagtacgtggtgggcagcgcctcctaactaccagtgacatt
gccttcactgacaaagattcagggtcaacagatgcacagctagtaatggtgagaaggggc
gtgccctttggcaaaatcgtgtttattgaggatacagcacaccaagtgttccgcttcacc
caggaggatctcaggaaaaaaaaggtactctttgtccattcaggtgctgatcatggatgg
ttccagctgcaggtttctgatggcctacatcaagtcacagctctcgtggaggttcaggcc
tctgacccttacatcgagattgtcaacaacacaggcctgttggtccaccaagggggtgaa
aaggttttagatgactctgttttaagactggagacaaatatggacatcagaaatgaggaa
gatgtttcatttagaattattactccaccaactgagggcgcaatacggaaaggagaacag
caagtgtcttctttttctcagaaggacttcctgtctggagacatcatctactaccataac
ggcagcactaatgccagggatttctttgaattctctgtagaagccaaccaagtattggtg
gaagacaatgtggagatcactgtcgttttggaaggtggcaatccaccacaggttatccac
aatgagaaaatatatgtattccaaggtgaagcagctgagatcaaaaaggaggacttaatg
gtttctgatgaaaacagtttccctcatgagattgtttacattgtacgatccccgccacgc
ttaggtgtcctcgttacagtctctcacagtgacacctcagacggcagcctaaacaatatc
caggccttcacccaggaggaaatcaacgctggcagtgttctgtacctcagctccaagcca
gaaccagggagcgacccattcattctggatgtcagcaatggtgcaaaggtcctcgaaggt
ctggtcgttcaacttgaagttctgccaatgacagtgcccttcagagtccagaacatcact
gttgaggaaggtggcaccagagtcttgtccacagatgttctccagatcccaagctcctat
ttcaccaatctgaacctggagtttactgtgatggagcctccaatgcacggggccattcgg
aatgcagagcggcatggaggtgaatccctgctgtcctttacctggaatgaggtggaacag
caacttatcctatatgaacatgatgacacagagacaaagatcgatgcattcactctagct
gccaacgtatcggagatcgaccgccagagccgccctgcgaccatcagagtcgacatccga
cctgtcaatgatgagtctccggtgctgaccgtcaatgcagggttacaaatctgggaaggt
gcaacaacggcaatcacagctgaggtcctgagcagcatcgacaaggactcgcctcctgaa
gaagtggtatataccattcagcccccggccagtggcaaggtcctcctgagatcctcctcg
ggcaacaaagagaccatgacctttacccaggcccaggtggatgaaggcctgattgtgtat
ctgcaccaagggtctcctgatggtggctttgccttcgacatctcagacggagacaatgtc
tccccaggtcacttcttcactgtgacagctaaaagcctggtcatcactatggaagccaaa
aaggatcttgttgtgtgtccagggtttagtcagccaatcacaaaccagactctaagagca
gcaactaatactgaagtaccactctccagtccgctgctgtacagtgtggtggagcctcca
cgactaggtcagctggtcaaaatttggctgtcgagtaacgacacaggactgacaactttc
agccaagacgaggtggatgccggcaaaatcttctaccaacatacaatgcctctagtgcca
ttttggatctctcaagatgcttttagtttccgcgtttcttcctccaatgcgacgactgag
ctgcaaactctccaagtgaatatctccttcgaggcagggtgtcaccaccgcagccactta
tgggtaaacaaaggtcttagtgttggaaagcatcaacgtgcagcgatcaacacgtcatcc
ctggatgcctccaacttgttggccaggctcccagagtccaacagatcgatctatgatgtg
gtgtttctgctgagtgaattccccagccacggacagctctctttggctgatgggcctatc
atggagaagcgcccttatttcttccagtcagatctgcatagtggtgggctagagtatgtc
cacaacagttctgaaacacaggaggatagttttaaatttaccccctggatctggcccagc
ggccaggttttctctgaagctccacaggaaccgggtgctttaatcatctcagagtctttc
aacattaccgtaagggaagtttatgagcacccaccggtactcctgacccagagtcccagc
ttgcaagtgcttcaaggatcaacagtcacactcaccacagagcacttgaatgtgatggac
cttgacagcacccctgataagatagagtacaccatcatcaaaaggccaacaagcggcttc
ctggcacattcggacaacagtgctgtgcccatcgttcagttcacccagaaagatgtgaat
gaaggcaggctcatattcatagtgactgggagcagcgccactgatgctttcagtctaagc
atctctgatggatatcatcaagccatccacacttttctgacagtcaacgtcctgcccgct
gttctgactgtgacaaacaagaagccagtggagatccgccaggaccagaaacaaacaact
ctaacacaagatcatctgttggctgtgtcggatgtggtacagcagaacatcctgtatagg
ataacaagagccccacagtttggacagctgagggtcaaccggaaggtggtgcaagagttt
tcccagaagcaggtggacaagggagaagtgtcctttatcttcacagacttgtcttcatcg
cgggatgaatttctgtttgttgcaacatcaggtggagctaatgccacaggtgttgttttg
atatcagttaaacctttggtcagtattcagcgtgggatcattttgccaagaggcacaact
gtcctcatggacacccatattctggatgcaagtgagctggccaacaagaccaacagtgtc
cctacctttaaagtgctaagagcacctagaagcagccagtttgtgaaagtcatgaaaggt
gggaagactcgccccatgtctgccgacatcttcacccagagtgacctggagcaggggctt
attggacttgaagtgcttgaggtagagaaaggtggacagcccgtgcaaaatgacagtttc
caagtggaactggcagccaaaggcgtcccaccagcctctgccacactgaaattcactacc
agaatttatgatccatcctttccctatcaagcaacgctactccagttccccctgggaccg
caggcaccagagacaagcagtgcactatatgtggattcttatacaatgacattggcacct
tggcatgtcacagaagacagtcttattgccaacagctcaggtgcaggaatatctccaaca
gtcccacacagtgaatctcctaccaaccccccacccatgcaaagagcctcatttctcagc
ttcattgaagccaacatgtttaccatcatcttgccagtttgtttgattatccttctgtct
gttctcggccttctcctgctgtactatctcatcagaagaaacaagacagggaaacaccat
gtccaggggacagcattcaagacaaagaatgggtctgtggaccaggagacattcaggaag
actgacccaaaccaagctataccgctaagcacgatgaagccactggagtccacagtacca
gagtcaccgacacctaggccaatggagactgggggacaggcagatcccgagctcctccaa
tcctgcaggacatcaaaccccggcctgaaaaacaatcagtattgggtctga
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integrated database retrieval system
