Pleurodeles waltl (Iberian ribbed newt): 138284019
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Entry
138284019 CDS
T10800
Symbol
LRRC49
Name
(RefSeq) leucine-rich repeat-containing protein 49 isoform X1
KO
K16606
leucine-rich repeat-containing protein 49
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pwl03037
]
138284019 (LRRC49)
04812 Cytoskeleton proteins [BR:
pwl04812
]
138284019 (LRRC49)
Cilium and associated proteins [BR:
pwl03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
138284019 (LRRC49)
Cytoskeleton proteins [BR:
pwl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
138284019 (LRRC49)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
LRR_LRWD1
FTH
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
138284019
NCBI-ProteinID:
XP_069078464
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All DBs
Position
3_1:complement(271733963..272181442)
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AA seq
770 aa
AA seq
DB search
MQPSRYRGRLAAGSPAANNYGLQLVLQASAVTERNKQFECRINKEQSSLHSKLVQHDTEK
NYPSKQDGRLASAFVHHRQNYSPIAANVTDIFVPEMRHGKDSVVQSTVAGRSTSAQLSSN
SRGRTDPENTFVTAATYKEDTELPKGDRVTSSRSVIKPGIPVVLRTAEERAASPDKLNLE
RQNLTMCPIIEGEEQIHLLNLQHNFISRIQNLSNLQRLIFLDLYDNQIEEICGLSGLRAL
RVLMLGKNRIRKITNLEKLEKLDVLDLHGNQITKIENVCHLGQLRVLNLARNFITVVENL
NGLDSLAELNLRHNEITSVKDVDALPSLEHLFLSFNNISCFQDILCLSDSTSLSDITLDG
NPIAQESWYKQTILCHMLQLRQLDMKRITEEERRTASVLARKEEEKKRESHKLALMKEKK
RIAICNAARLWERQQNRAAHIAELNQESRDSDVISHKPSQINGSAAYPSPEENRSLDSLL
SSAVQGLNVIDSHLVELEGDTLHLYGPGALESLERTWSVQTTGTVTTISFTFIDFDEISQ
VLPKLKMKFPNSSHLKFKETNLTTLQQFNALAQVRRLEQLTVDPQGNPVVNFTLWKYYVL
FRLKHFNVQKINQTEVTPNDLIMAERLFGILAHVASSRLPQYRLLHILGESKKKQLCNLL
DSKSKKPAVSGEESIANTKVVGENQGREIMNYTIKVILTERLEGIRERSLFCRTYVQDLV
KEATDISTKNESLQRLWPQMFIELVRDAVIEVRDKDSYMKLCLQRILDQK
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccagcaggtaccgggggcggcttgcggctggcagtccagcggccaacaattat
ggattgcagctggttcttcaggcatccgctgtaactgagagaaacaagcagtttgaatgc
agaataaataaagagcagtcatcattgcacagcaaacttgtgcaacacgatacagaaaaa
aactatcccagcaagcaagatggacggttagccagtgcttttgttcaccataggcaaaac
tattctccgatagcagcgaacgtgactgatatttttgttccagaaatgaggcatggtaaa
gattctgtggtacagagtactgttgcaggtcgttcaacttcagcccagttgtcctcaaac
tccagagggaggacagatcctgaaaatacgtttgtcacagcagcgacttacaaagaggac
acagagttacctaaaggagatcgtgtaacttcttcacgaagtgtaataaaaccaggaatt
ccagttgtgctacgtactgctgaagagagagcagcaagccctgataagttaaatcttgaa
agacaaaatctgaccatgtgcccaattattgagggcgaggagcagattcatcttctaaat
ttgcagcataatttcattagtcggatccagaatctttcgaatcttcagcgtcttatcttc
ttggatttatatgacaaccaaattgaggaaatttgtggcctttctgggttaagagctctt
cgtgtacttatgttaggcaagaacagaataaggaaaatcacaaatcttgagaagctagaa
aaacttgatgtattggatcttcatggaaatcagattaccaaaatagaaaatgtatgtcat
ttggggcaactccgtgtattaaaccttgctaggaacttcataactgttgttgaaaatctt
aatggactggattcattggcagaactgaacctgcgtcataacgagatcacatcagtgaaa
gacgtggatgcgctgcccagcctcgaacacctttttctcagctttaacaacatatcgtgt
tttcaagatattctgtgcctttctgattccacgtccctttcagacatcacacttgatggc
aatcctatagctcaggagtcatggtacaagcaaaccattctctgccacatgctgcagctg
cgtcagttggacatgaagagaatcacagaagaagaaaggcgcacagcatcagtcctggca
agaaaagaggaagagaagaagcgggaaagtcataagttggcattaatgaaggaaaagaag
cggatagccatttgcaacgctgctcggctgtgggaaagacaacagaacagagcggctcat
atcgctgaattaaatcaggagagcagagacagtgacgtaatttctcataaaccctcacag
attaatgggagcgcggcgtatccaagtcctgaggaaaacagatcgctagatagcctgttg
agcagtgctgtacaagggcttaacgtcatagattcccaccttgttgaattggaaggtgac
acgctacacttatatggaccaggggctctggagtcactggagaggacttggagtgttcag
accactggcactgtcactacaatctctttcacattcatagattttgatgaaatttctcag
gtgctccccaaactaaagatgaagtttcccaattcatcacaccttaaattcaaagagaca
aatctcaccacacttcaacagtttaacgctttggctcaggttcgtcgactggaacaacta
acagtggatcctcagggaaaccccgttgtgaactttacactatggaaatattatgtactg
ttcaggttgaaacacttcaatgtacagaaaataaatcaaacagaggtaacaccaaatgat
ttaataatggcggaaagactatttggaattttagctcatgtagcatcatcacgtttacca
cagtatcggctgcttcacatccttggagaatccaagaaaaaacagctctgtaatcttctg
gacagcaaaagcaagaaacctgcagtgtcgggtgaagaaagcatagccaacacaaaggtg
gtgggagaaaatcaaggaagagagataatgaattacacaattaaagttatcctaacagag
aggctagagggcatcagggagagaagtcttttttgcagaacctatgttcaggacttggtg
aaagaagctacagatataagtacaaaaaacgaatccctccagagactgtggccccagatg
ttcatcgaacttgtgagagatgcggtgatagaagtccgcgataaagactcctacatgaaa
ctctgcctgcaaaggatccttgaccagaaatag
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